Chiloscyllium plagiosum (whitespotted bambooshark): 122559055
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Entry
122559055 CDS
T08871
Symbol
thoc7
Name
(RefSeq) THO complex subunit 7 homolog
KO
K13176
THO complex subunit 7
Organism
cpla
Chiloscyllium plagiosum (whitespotted bambooshark)
Pathway
cpla03013
Nucleocytoplasmic transport
cpla03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
cpla00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
122559055 (thoc7)
09122 Translation
03013 Nucleocytoplasmic transport
122559055 (thoc7)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cpla03019
]
122559055 (thoc7)
03041 Spliceosome [BR:
cpla03041
]
122559055 (thoc7)
Messenger RNA biogenesis [BR:
cpla03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
TREX complex
122559055 (thoc7)
Spliceosome [BR:
cpla03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
122559055 (thoc7)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
THOC7
UPF0193
KIF21A
OVT1
DASH_Dad2
COG6_N
Peptidase_S10
FapA
Motif
Other DBs
NCBI-GeneID:
122559055
NCBI-ProteinID:
XP_043564198
LinkDB
All DBs
Position
18:complement(38452610..38486360)
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AA seq
203 aa
AA seq
DB search
MSVTDDEVIRKRLLIDGDGAGDDRRINLLLKSFIKWCNSGSQEEGYSQHQRMLGTLGQCE
FSMGKTLLVYDMNLREMLNYEKISKDIESNIAAAHDKISECKKQILQAKRIRKNRQEYDA
LAKVIQQHPDRHETLQQLEALGKELEHLSHIKESVEDKLELRRKQFHVLLSTIHELQQTL
ESDEKLSEGEDSPETRMEMQNGH
NT seq
612 nt
NT seq
+upstream
nt +downstream
nt
atgtcggtcactgacgatgaagttatacgtaagcggcttctaattgatggagatggtgct
ggagatgatcgacgtattaatctactactaaaaagcttcattaaatggtgtaattcagga
tctcaagaggagggatatagccaacaccagcgcatgcttggtaccttggggcagtgtgaa
ttctctatgggaaaaactttgcttgtgtatgatatgaatctgcgggaaatgctgaattat
gagaaaatatcaaaagacatagaaagtaacattgcagctgcacatgacaagatctcagaa
tgcaaaaaacagattctacaagcaaaacgaattcggaaaaatcgtcaagagtatgatgca
ttagcaaaagtgatacaacagcatcctgatagacatgaaaccttacagcaactggaagca
ttgggtaaagaattagagcacctttctcatattaaggagagtgttgaagataagcttgaa
ttaagaagaaaacaattccatgttctactcagtactatacatgaactacaacaaacactg
gaaagtgatgagaaattatcagaaggtgaggactctcctgagactcgcatggagatgcaa
aatgggcattag
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