Chiloscyllium plagiosum (whitespotted bambooshark): 122559093
Help
Entry
122559093 CDS
T08871
Name
(RefSeq) contactin-4-like
KO
K06762
contactin 4
Organism
cpla
Chiloscyllium plagiosum (whitespotted bambooshark)
Brite
KEGG Orthology (KO) [BR:
cpla00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
cpla04515
]
122559093
Cell adhesion molecules [BR:
cpla04515
]
Immunoglobulin superfamily
Contactins
122559093
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ig_3
I-set
ig
Ig_2
fn3
V-set
Ig_5
Pur_ac_phosph_N
Tissue_fac
Motif
Other DBs
NCBI-GeneID:
122559093
NCBI-ProteinID:
XP_043564301
LinkDB
All DBs
Position
18:complement(48389546..50912193)
Genome browser
AA seq
1028 aa
AA seq
DB search
MMLLWKLLLLQSFIGCLAGNGKPHGPVFLHEPNDIVFPVDSEEEKATLNCEATGNPTPHY
RWQRNGTDIDFSLSYRYSLIGGNLVINNPVRTQDYGTYQCFATNLFGTIVSKAAKLEFAY
LESFKGKSRNNVSVREGQGVVLLCGPPPHSTELKYTWIFNQFPTFVEQDNRRFVSQRTGN
LYISKVEVSDVGSYICEIENTVTNKRVLSPLTPLVLRSDGVMGEYEPKIEVRFPETVFAA
KGSTVKLECFALGNPVPTISWRRIGSAFSDKVKVNKTYGVLEITSFQQKDSGTYECTAEN
SRGKNTARGQLVSYARPNWIRNITDVYVPIGESLQWICKASGEPKPSHKWLKNGEPLIIE
ERIQVENGMLSIRAVNLSDSGMYQCVAENKHGVIYVSAELRVMASAPDFSMIPLKKLIPV
RVGGEVIIECKPKASPRAMLSWMKGNEILQESERITLKDGSLRIVNVTKRDDGRYTCIAR
NHFGSANSTGTITVKDPTRITTPPSDVDVTVGESTILPCQVSHDPSLSVEFSWSFNGQLI
DFKRDRDHFENVGGQGYSGDLMVRNIQLKHAGRFVCMVQTTVDSASAGADLIVRVPPGPP
RGVIVEEITDTTAQLSWSPGIDNHSPISMYTIQAQTPFSVGWQALKTVPEVIDGDAVTAT
VIDLSPWVDYEFRVVASNNIGIGEPSLPSAKSRTEEALPDMGPANVSGGGGSRSELVITW
EPVPEELQNGEGFGYVVAFRLLGTTSWMKAAVTSADASRYVFRNESVPPFSPYEVKVGVY
NNKGEGPYSPVIIVYSAEEEPTAAPFNVSARSLSASEVQVFWEAVPWETSKGKVRGYEIW
YWADDENEETADKLRSNGNVTSARVTGLKGSTLYYLMVKAYSSAGTGPASPLVNVTTRKP
PPSQAPGKIWWESASSGVVLNWDHVKAMENESEVTGYKVLYRNNRQSSTKVIETNNTSVE
LLLPDDADYIIEVKTFSDGGDGISSAQIRIPRMSYPDGGRSGTSASNACTLSAFSTIVLS
LSARSALW
NT seq
3087 nt
NT seq
+upstream
nt +downstream
nt
atgatgttgctatggaaactgctgttactacaatcattcattggctgccttgcagggaat
ggcaagccacatgggccagtttttctccatgagccgaatgacattgtatttcctgtggat
tctgaggaagagaaagcaacgctgaactgtgaagcaacagggaatccaacaccacattac
agatggcaaagaaatggcacagacattgacttcagcctcagttatcgctacagtttgatt
ggtggcaacctcgttatcaataacccagttagaacccaggattatggaacctaccaatgc
ttcgcaacaaatttgtttggcacaattgtgagcaaagcagccaagcttgaatttgcatat
cttgaaagcttcaaaggaaaatcaagaaataacgtgtctgtccgagagggacaaggagtt
gtgttgctttgtggccctccaccacattctacagaactaaaatacacttggatatttaac
cagtttccaaccttcgtcgaacaagataatcgtcgctttgtttctcaaagaactggaaac
ttatacatctcaaaagtggaggtatcagatgttggttcctacatctgtgaaatagagaat
acagtaactaataagagagttctgagtccacttacccctctggtactacgtagtgatgga
gtgatgggtgaatatgaaccaaagattgaagttcgtttcccagaaacagtctttgcagct
aaaggttcaacagtgaagctggaatgctttgcactgggaaatccagttcctactattagc
tggagaagaattggcagcgccttctctgacaaggtcaaagtgaacaaaacgtatggtgtt
cttgaaatcacaagctttcagcagaaggactcgggtacatatgaatgcactgctgaaaat
tcaagaggcaagaacaccgcaagaggacaattggtttcttatgcgcggcctaactggatt
cgaaacataactgatgtttatgtgcctattggagaaagtctgcagtggatttgcaaggca
agtggagagccgaaaccttctcacaaatggctgaagaatggtgaaccccttataatagag
gaaagaattcaagttgaaaatggaatgctttctatccgtgctgttaacctgtcagattct
ggcatgtatcagtgcgtggctgaaaacaaacatggagtaatttatgtcagcgctgagctt
cgagttatggcgtcagctcctgatttttcaatgatccccttgaagaaattaatacctgtg
cgcgtaggtggtgaggtcatcattgaatgtaaaccaaaagcttccccaagagcaatgttg
tcatggatgaaaggaaatgagattctgcaagaaagtgaaaggattaccctgaaagatggc
agtttaagaatagttaatgtaacaaagagggatgatggacgctacacttgtattgcccgg
aaccattttggatcagccaacagcacaggaacaataacagtgaaagacccaacaagaatt
accacaccgccatcagacgtggatgtcactgtgggggaaagtacaatcttgccatgtcaa
gtctcccatgatccttcactgagtgttgaattctcatggtcttttaatggtcaacttata
gacttcaagagagatagagatcattttgaaaacgtcggagggcagggttactctggtgat
ttgatggtcagaaatattcagcttaaacatgctggtagatttgtttgcatggtccagacc
actgttgacagtgcgtcagctggagctgatctgattgtgagagttccaccaggtccaccc
aggggtgtgatagtggaagagattacagataccacagctcaactctcctggagccctggt
attgacaatcacagtccaatttccatgtacactatacaggcacaaacgcccttttcagtt
ggttggcaagctcttaaaacagttcctgaggtcattgatggcgatgctgtaactgcgaca
gtgattgatttaagtccctgggtagactatgaattcagagttgttgccagtaacaacatt
ggcattggagaaccgagcttaccatctgccaaatcaagaacagaagaagctcttcctgac
atgggtccggccaatgttagtgggggaggtggcagtcgttctgaactggtaataacttgg
gagcctgtgcctgaagagttacaaaatggtgaaggctttggatatgttgttgctttccga
ctgctgggaacgacaagctggatgaaggcagcagtaacctcagcagatgcatcaagatac
gtgtttagaaatgaaagtgtgccacctttctctccttatgaagtaaaagttggagtctat
aataacaaaggcgaaggcccttacagcccagtaatcattgtatattctgctgaggaggaa
cccactgcagcaccattcaatgtctcagccagaagcctgtcagcttcagaagtgcaagtt
ttctgggaagctgtgccctgggagacaagcaaaggaaaagtgcgaggttatgagatatgg
tactgggcagacgatgagaatgaagagacagcagataagctgagatcaaatggaaacgtt
acttcagcgagggtcacgggattgaagggcagtacactttattacctgatggttaaagca
tacagcagtgctggaacaggacccgccagccctctagttaatgtcacaacccgaaaacca
ccaccaagtcaagcacctggtaaaatctggtgggaatcagccagctctggagttgtttta
aactgggatcatgtcaaagcaatggaaaatgaatcagaagtgacaggatataaagtttta
tacagaaataacagacagagcagtacaaaggtgatagaaaccaacaatacatcagtggag
cttctactccccgatgatgctgattacatcattgaagtgaagacgttcagtgacggtggt
gacggaatcagtagtgctcaaatcagaatcccacgaatgtcatatccagatggtggaaga
tctggaacttcagcatcaaatgcctgcacgttgtcagcctttagcactatagtgctgtcc
ctgtcagctcgatcagcattatggtga
DBGET
integrated database retrieval system
