Chiloscyllium plagiosum (whitespotted bambooshark): 122559135
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Entry
122559135 CDS
T08871
Symbol
rrp9
Name
(RefSeq) U3 small nucleolar RNA-interacting protein 2 isoform X1
KO
K14793
ribosomal RNA-processing protein 9
Organism
cpla
Chiloscyllium plagiosum (whitespotted bambooshark)
Brite
KEGG Orthology (KO) [BR:
cpla00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
cpla03009
]
122559135 (rrp9)
Ribosome biogenesis [BR:
cpla03009
]
Eukaryotic type
90S particles
Other 90S particles
122559135 (rrp9)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_Prp19
WD40_WDHD1_1st
Beta-prop_TEP1_2nd
Beta-prop_EML_2
WD40_CDC20-Fz
WDR55
Beta-prop_EML
Beta-prop_CAF1B_HIR1
Beta-prop_WDR75_1st
EIF3I
WD40_MABP1-WDR62_2nd
Beta-prop_WDR90_POC16_2nd
Beta-prop_TEP1_C
WDR90_beta-prop_4th
WD40_MABP1-WDR62_1st
NBCH_WD40
Beta-prop_SCAP
Beta-prop_DCAF12
ANAPC4_WD40
Beta-prop_IFT122_1st
Beta-prop_SPT8
PEP5_VPS11_N
Beta-prop_IFT140_1st
Beta-prop_DCAF4
Beta-prop_RIG_2nd
Beta-prop_WDR19_1st
Beta-prop_HPS5
Beta-prop_Vps41
Beta-prop_WDR75_2nd
Beta-prop_NWD2_C
WD40_CFAP43
WDR54
Motif
Other DBs
NCBI-GeneID:
122559135
NCBI-ProteinID:
XP_043564409
LinkDB
All DBs
Position
18:complement(63232609..63265543)
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AA seq
478 aa
AA seq
DB search
MRIGEGRMAAAGSFFIRKKRAAAGEGRGRKRKVEDGDEKVHNKRPVRMNEEISSDSETES
DRPNKDAEELEIEETAQEKKLRLAKLYLEQLQKEEEEKADEEQFERDLFGSRLEEEVLEQ
KGKLKRLLAKDYLPPDESEIRLLRGHQLPVTCLVLSPDDKYIFSASKDCSIIKWDVTSGK
KVHTIHRGHKGAEGQQVGHTMHILSMAISSDSKYLATGDRNKLILIWNAASCQHLYTFKG
HKDAVSGLSFRKGTHQLYSASHDRSVKVWNVDQSAYVETMFGHQDAITGLDSLSRERCVT
AGGRDRTVRVWKIVEEAQLVFHGHESSIDCIQLMNEEYMISGGDDGSLALWTVTKKRPLM
TVRKAHGIHGDPVTQQPYWITSVAALLNSDLIASGSHNSKIRLWKCGEGFKTLEPLFDIP
MVGFVNCLKFSSSGEFLVAGMGQEHRLGRWWRLKEAKNGICIIPLKKTSPKQQSGDNK
NT seq
1437 nt
NT seq
+upstream
nt +downstream
nt
atgcggattggtgagggtcgaatggcggcggcaggatcattcttcatccgtaagaagaga
gcggcagcgggagagggcagaggtcgcaagaggaaggttgaagatggtgatgagaaagtc
cacaacaagcgtcctgtgaggatgaatgaagagatttccagtgattctgaaaccgaaagt
gatagacccaataaagatgctgaagagttggagattgaggagacagcacaagagaagaaa
ttgcgacttgccaaactctacctagagcaactgcagaaagaagaggaagagaaagcagat
gaggagcagtttgagagagacctgtttggaagcaggttggaggaggaagtgctcgagcag
aagggcaaacttaaacgactcctggcaaaggattatctcccacccgatgaatccgagatc
cgtctactacggggtcatcagcttccagtcacatgtctggttctctcccccgatgacaaa
tacatattctcagcttccaaagattgttccatcataaaatgggacgttaccagtgggaaa
aaggttcacacgatccacagagggcacaagggtgctgaaggtcagcaagtgggccacaca
atgcacatcctgtccatggcaatctcctccgatagcaagtacttggctacaggagaccga
aacaaactgatcttaatctggaatgctgcctcatgtcaacatctttacacgttcaaagga
cataaagatgcagtatcgggcctgtcctttcggaaaggcacccatcagttatacagtgcc
tcacatgaccgctcagtcaaggtctggaatgtcgaccagagcgcctacgttgaaactatg
ttcggtcaccaggatgctattacgggtctggacagccttagtcgagaacgttgtgtcacc
gcagggggccgagaccgcacagtcagagtctggaagattgttgaagaagcacagcttgta
tttcatggtcacgagagttccattgactgcatacaactgatgaatgaggaatacatgatt
tctggaggtgatgatggctccttggccctttggacagttacaaagaagaggcctctgatg
acggtcaggaaagctcatggtatccatggagacccagtgacacagcagccgtattggatt
acctccgtggcagcattgctgaacagtgatttgatagcctcaggttcacataattccaaa
attaggctctggaaatgtggggaaggctttaagacattggagccactgtttgacattccc
atggtcggctttgtgaactgtttgaagttttccagttcaggagaatttttggtggctggc
atggggcaagagcacaggttaggccgctggtggagactaaaagaagccaagaatggaatc
tgtattatccctctgaaaaagacatcgcccaaacaacagtctggggacaacaaatag
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