Chiloscyllium plagiosum (whitespotted bambooshark): 122559151
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Entry
122559151 CDS
T08871
Symbol
rad54l2
Name
(RefSeq) helicase ARIP4 isoform X1
KO
K10876
RAD54-like protein 2 [EC:5.6.2.-]
Organism
cpla
Chiloscyllium plagiosum (whitespotted bambooshark)
Brite
KEGG Orthology (KO) [BR:
cpla00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cpla03400
]
122559151 (rad54l2)
DNA repair and recombination proteins [BR:
cpla03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Rad54 family proteins
122559151 (rad54l2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
ResIII
ERCC3_RAD25_C
HDA2-3
Motif
Other DBs
NCBI-GeneID:
122559151
NCBI-ProteinID:
XP_043564445
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All DBs
Position
18:complement(65589597..65713517)
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AA seq
1459 aa
AA seq
DB search
MINPITCTEGETNQLASMRATDLADRSSSLFLLGNTLYFTNDSEPTPVGSEHSPQPDARG
WKCSTSTTSSQNERKQSCSENGKKQRSTKPGHMRRNIRKLLREDQLEAGTKAAQLEELER
LKRLEQQRKEFVLPTLPFDLIQESNTQTLKKEPVWNEEETAQKTDEIPPRLPKPEVICVD
ISSGSEEGAAAEEQVLKNEDVIELSSGEEDSLHILDSESSNEEEEVNEESSGAHVNDALN
QPDDLGRVLVNINHPPNEQDIFLAPQLARAVKSHQVGGIRFLYDNLVESQERFKSSSGFG
CILAHSMGLGKTLQIVSFVDVLFRYTEARTVLAIVPVNTLQNWLAEFNMWLPAPEILPAD
YNSEEIQPRSFKVHILNDEHKTTVARSKVINEWSADGGVLLMGYEMYRLLSLKKSFVTGR
RKKTKKPAGPVIIDLDEEDRQQELLKGIEKALARPGPDVVICDEGHRIKNCHASTSQALK
SIRSRRRVVLTGYPLQNNLMEYWCMVDFVRPDFLGTRQEFSNMFERPILNGQCIDSTPQD
VRLMRYRSHVLHSLLEGFVQRRGHDVLRGHLPEKEEHVLLVRLSKIQRSLYTEFMNRFRD
AGNSGWLGLNPLKAFCVCCKIWNHPDVLYEALQKENLANDPDLDLEVNDLNTGAPNARAL
PVGGKRKTESASTTIDSANSKFTQNVGFNHFQDKTNQVITYEWAKDVLANYQPGLLENSA
KMVLLFELIEETLKHGDKILVFSQSLSTLSVIEEFLGKKMMPTKTGSEEPLQPWIRNVNY
YRLDGSTSAMDRERLINQFNDPRNTKANLFLLSTRAGCLGINLVGANRVVVFDASWNPCH
DAQAVCRVYRYGQKKPCFIYRLVSDYTLEKKIYDRQISKQGMSDRVIDDLNPVLNFTRKE
VESLLHFVEEEPVLSDTSIEPEKICDEVILRACAKHKQLVTKQPFQHESLLMDRKEYKLT
KAEKKAAKKSYEDEKRASVPYTRPSYAQYYPASDQSLTNIPIFSQRHWRGPIKGLDEKPV
ASVRPLQSTPIPMMPRQVPGGMAIPSSGFGPVFPVSHLQRAGVVVQKIVTTTDIVIPGTN
TSTDVQARINAGESIHVIRGTKGMYIRTCDGRIFAVRMGNKPKVTEGSHAAASGSQADSL
NHGGHGSSSPDQAQKGLSPEEIARPLSPDSPEIISELQRYAEAAAARESSDRPGTVTNTH
GDHSKLRPAQPSDQLLGINSSASARAAALNMPTASRYMDWTSGAFGMDVRGGKRKASSSP
LEDHVRKQRHSMPAHNYSLPAGFNLSSVGLSPEMSGLAGNCPTLLNPLYSTGSPYYTLPG
LLGDPRLMFPMTTDPRLAASTAGPAAPTSATGTAAPFMLNPTSTLPAGLLPGLHHPFAQS
LLNEPRMFAPYPMPLLTNSLSAGVGQTSRVFAPSTSSSSSYPAPEFLGTTVPRVDPPAGL
DTAGSSDDDVIEVTSSNTG
NT seq
4380 nt
NT seq
+upstream
nt +downstream
nt
atgatcaatccaattacctgcactgagggagaaacaaatcagctggcatctatgagagcg
acggacttggctgacagatcaagcagtctcttcctcctaggtaacactctgtacttcaca
aatgattctgagcccacccctgtcggttctgagcattctccacagcccgatgccagagga
tggaaatgctccacttcaactacctcatcacagaatgaaaggaagcagtcttgctcagaa
aatggcaagaagcagaggtcaacaaagcctggccacatgaggagaaacatccgaaaacta
ctacgggaggaccaacttgaggctggaaccaaagcagcacagctggaggaattagagcga
ctcaaacgccttgagcaacagaggaaggaatttgtgttaccaactttgccatttgatctc
atacaagaatccaatactcaaaccttaaaaaaagaaccagtctggaatgaggaggaaact
gcacagaaaacagatgaaattcctccaagactcccaaaacctgaggtaatctgtgtggat
ataagcagcgggagtgaagaaggtgcagcagccgaggagcaggtcttaaagaatgaagat
gtgattgagctgagctcaggggaagaagattcactgcacattcttgacagtgaatccagc
aacgaagaggaggaggtgaatgaagagagtagtggtgcacatgtgaacgatgccttgaat
cagccagatgatctgggccgtgtcctagtcaacataaatcatccaccaaatgagcaagat
attttcctggcaccccaactggcacgagcagtcaaatcacaccaggtcggtggaatccgc
ttcctgtatgacaatctagtggaatcacaagaaagatttaaaagtagcagtgggtttggc
tgtatcctagcacacagtatgggtcttggaaagaccttgcagatagtctccttcgtggat
gtcctctttcgatacacagaagctcgcactgtccttgctattgtaccggtgaacactttg
cagaactggttggcagagtttaacatgtggctgcctgccccagaaatacttcctgcagat
tacaactctgaggagatacagcccaggagttttaaagttcacatcctaaatgacgaacac
aaaacaactgtggcccgttccaaggtgattaatgaatggtcagcagatggtggtgtgctg
ttaatggggtatgagatgtatcgtttactgtcgttaaaaaagtcatttgttactgggagg
aggaagaaaacaaagaaaccagcgggacctgtaattatagatctagatgaggaagatcgg
caacaagagctattgaaagggattgaaaaagcactggctagaccaggccctgatgttgtc
atttgtgacgaaggccaccgcataaagaattgccatgccagtacatctcaggccttgaag
agcatccgttcgaggaggcgagtggtcctgactgggtatccacttcagaacaatcttatg
gagtactggtgcatggtggactttgtccggcccgatttccttggtaccaggcaggagttc
agcaacatgtttgagcgtcccatcttaaatggacagtgtattgactccacaccgcaggat
gtccgcctgatgcggtaccgcagccacgttttacacagcctgctagaaggatttgtacaa
agacgaggtcacgatgtcttgagaggtcaccttcctgagaaagaagaacacgtgctgcta
gtccgtctctccaaaattcagcgatcactgtacaccgagtttatgaatcgtttccgagat
gcaggaaacagtggctggctgggtctcaatcctctcaaagcattctgtgtctgctgtaag
atctggaaccatccagatgtactttatgaggctttgcagaaagagaacttagccaatgat
ccagatttagatcttgaggtaaatgatcttaacacaggtgcgccaaatgcacgtgctctg
ccagttgggggcaagaggaaaacggaaagtgcatcaaccaccatagattcagcaaacagc
aagttcacgcagaatgttggcttcaaccatttccaagacaaaactaaccaggtcattacc
tatgagtgggctaaggatgttttggcaaactaccaacctggcttgctagagaactctgca
aaaatggtcctactgtttgagctgatagaagagaccctgaaacatggggataagatcctt
gtgtttagccagagcctttctacgctctcagtcattgaggaatttctcggaaagaaaatg
atgccaacaaaaacaggctctgaggaacctctacaaccatggatccgaaatgttaactat
taccgactggatggaagcacctctgcaatggatcgggaacggctgatcaatcagttcaat
gaccctcgcaatactaaagctaatctcttcctgttgtctacgcgagctggctgtttggga
atcaatctggttggggccaatcgagtggtggtgtttgacgcttcctggaatccctgtcat
gatgctcaggcagtgtgtcgtgtgtaccgctatggtcagaagaagccttgtttcatatat
cgactggtttctgactacaccctagagaagaagatctatgataggcagatctcaaagcag
ggcatgtctgaccgtgttattgatgatctcaatccagtgctgaatttcaccaggaaggaa
gtggaatcactcctgcattttgtggaggaggagcctgttttatcagataccagcattgaa
ccagagaaaatatgtgatgaagtaattctcagagcatgcgccaaacataaacagcttgtc
actaagcaacctttccagcatgaatcattgctgatggaccgcaaggaatacaagctgacc
aaggcagagaagaaggcagcgaagaagagctatgaggatgagaaacgggcatcagtccct
tacactcggccatcttatgcccagtattacccagccagtgaccagagccttaccaacatc
cccatcttcagccagcgacattggaggggcccaatcaaggggctggatgagaagccagtg
gctagtgttcgccctttgcagtcaacgccaattccaatgatgcctcggcaggtgccaggt
ggaatggcaataccgagttcgggatttggtcctgtgttcccagtcagtcacctccagcgt
gctggtgtcgtggtacagaaaatcgtcaccaccacagatatagttattcctggaaccaac
acatcaactgatgtccaagcaaggattaatgctggggaaagcatccatgtaatcagggga
acaaaagggatgtacatacgcacctgtgatggaaggatctttgctgtgcgaatgggcaat
aaaccaaaagtgactgagggaagccatgcagctgcatcaggttcgcaggcagattccctt
aatcatgggggtcacggctcttcatcccctgaccaggcacaaaagggcctttccccagag
gagatcgcacggcctctttccccggacagtccagagattataagtgagctccagcgttac
gctgaggcagcagctgccagagagtccagcgaccggcctggcaccgtcaccaacacacat
ggagaccacagcaaactgaggccggcccagccatctgaccaactcctaggcatcaacagt
tctgcatcagcccgtgctgctgccttgaacatgccaacagcaagtcgctatatggactgg
acgtcgggcgcttttgggatggacgtcagaggaggcaagcgcaaggcttcctcttctcct
ttagaggaccacgtccggaagcaacggcactcaatgccagcacacaactactctcttcct
gctggctttaacttatcgtctgttggcttgagccctgagatgtctgggctggctggtaat
tgtccgactctcctgaaccccctgtacagcacggggagcccctactacacactgcctggc
ttgttgggggacccacgcctgatgttccccatgactactgacccgcgactcgctgctagc
actgctggccccgctgcccctacctcagccacaggcactgcggcgcccttcatgctcaac
ccaacctcgaccctgcccgcaggcctgctgcccggcctgcaccacccattcgcccagtct
ctgctaaatgagccccggatgttcgccccatacccgatgcccctgctcaccaacagcctg
tcggccggcgtgggacagaccagcagagtctttgcgccatcaacgtcgtcatcttccagc
tacccagctccggagttccttggcaccacggttccacgagtggacccacctgcaggcttg
gacactgctggcagttcagatgacgatgtcattgaggtcacgagtagtaacacaggctga
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