Chiloscyllium plagiosum (whitespotted bambooshark): 122559421
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Entry
122559421 CDS
T08871
Name
(RefSeq) cadherin-related family member 3-like
KO
K16503
cadherin-related family member 3
Organism
cpla
Chiloscyllium plagiosum (whitespotted bambooshark)
Brite
KEGG Orthology (KO) [BR:
cpla00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
cpla04515
]
122559421
Cell adhesion molecules [BR:
cpla04515
]
Cadherins
Cadherin related
122559421
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Cadherin
Cadherin_FAT4_N
Cadherin_CELSR2_9th
Cadherin_2
Surface-like_ins_dom
Motif
Other DBs
NCBI-GeneID:
122559421
NCBI-ProteinID:
XP_043564804
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All DBs
Position
19:complement(12114156..12167157)
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AA seq
897 aa
AA seq
DB search
MDIIGGILKMCLIVDFSFRGEIPGVRGFIKVQNLPATVTIKEDTPAGVAIFNFSVVATST
EITLTPKIANTNPVNNFFAISIITDMYLEVTVSDNPGLDYETQSNYVLLIYVTDNKGYSD
FGTLTVLLSDVNEPPRFLDNLANGVVYVDFLENLAVGAIIYEVQAIDPDRDDNILSYSVN
SSLVTIHPSGKSGAILAARPFHYEEDFHRFIVLVTVKDTIGNSISGIVVVTLIDTNDNWP
IFKLNETIFEMSEETPPNSVIGKVTDHGLDEDGVLSSLIYVMSTTNQYFTINSVTGELIV
SAIIDRDSSPFRTVSTQQFEVVAKDSLSGRHAASMTVIVIIRDINDNQPFCFPHAHSIQI
PETIEKGTTVVTISCADNDVDLANSQFTISLQPALRTAGRFALDGKNNDTIVVIGNLDFE
ATSHLEDNNVYVMSVVVTDKAHPHYQDTVTVYVTVIPVNEFNPSFTQTSYTFNISEFSEM
GTKIGQVLAEDKDLPSLELIYSLVGGGSTLGYSQLFWMNPASGELHLVAQPEYEQTAQYL
LTVQAVDKDSNDPKAATATVTVNILPANDKPPDCLPKFYSLMILDDTAVGTNIQGFHLAC
TDQDSSPQSFRYFITSGNINNHFRLSPSAGSNISKLILALPFDYTHGVDRVTNYNLLIQI
TDDNLLAGSKKSNIVQTGRVKINVRIIIPTPSTQKTTTTPNITYIRLSQNTYQTDSWYIP
FIITLGCLLLLGMLGYIAYLYINYIRSIPKSKVEKKSLVEEKEPKSKKQHNVILEMITRN
TIFDGEAVDPVTGNVYQYNTNSGARRWKDTKLPMKEYGNVRDATPNLMSNINNKTNFTQN
SNMNEVHVDQIDNQKTDYDRTSLRPPSKFRKQNKVVARRLEPSQTLNSLSKVSLKLM
NT seq
2694 nt
NT seq
+upstream
nt +downstream
nt
atggacataattggcggcatccttaaaatgtgcctcattgtcgacttctccttccgagga
gaaatacctggtgtcagaggatttatcaaggtacagaatctaccagctactgtaacaata
aaagaagacactcctgcaggagttgctatcttcaacttttcagttgttgcaacaagtact
gaaattacattaactccgaaaatagcaaataccaatccagtcaacaacttctttgctatc
tcaattataactgacatgtacttggaggtgacggtctcagacaatcctggactggactac
gaaactcaatccaattacgtcctgttaatctatgttacagataataagggatattcagac
tttggaacacttacagttttattaagtgatgttaatgagcccccaagattcctggataat
cttgcaaatggagttgtatatgttgactttctggagaatttagcagttggtgcaattata
tacgaagttcaagcaattgatcctgacagggatgacaatattctttcttactcagtaaac
tcctctttggttactattcatcccagtgggaaaagtggggcaattcttgcagcaagacca
tttcattatgaagaagattttcacagattcattgtgttagtgactgtgaaggacacaata
ggtaatagcatctctgggattgtggtggttactttaattgacacaaatgacaattggccc
atctttaagctaaatgaaacaatatttgaaatgtcggaagaaacacccccaaattcagta
atcggaaaagttacagaccatggtttggatgaagatggtgtattaagcagtttgatttat
gttatgagcactacaaatcaatacttcactattaactcagtcacaggtgaactgattgtg
tcagcaataattgacagagacagtagccctttccggactgtttcaactcaacagtttgaa
gttgttgctaaagacagcctttctggacggcatgcagcttcaatgacagtaatagttatc
ataagagacatcaacgataaccagcccttctgtttcccacatgcacacagcatccagata
ccagaaacgattgaaaagggtacaacagttgttaccatatcctgtgcagataatgatgtg
gatcttgcaaacagccagttcactatttcacttcagcctgctctcaggactgctggaaga
tttgctctggatgggaagaataatgatactattgtggttattggtaacttggactttgaa
gcaacctctcatcttgaggataacaatgtttatgtgatgtcagtagttgtcacagataaa
gctcatccacattaccaggatacagtgactgtatatgtcacagtcataccagtcaatgaa
tttaatccttcattcacccagacatcttacactttcaacatatccgaattcagtgaaatg
ggaacaaagattggacaagtgcttgcagaggacaaagatcttccaagccttgaacttatt
tattcacttgtaggagggggaagcactctaggctatagtcaattattttggatgaaccca
gcctcaggggaactacaccttgtggctcaaccagagtatgagcaaactgcacagtacctt
ctgacagtacaagctgttgataaagactccaatgatccaaaggctgctacagctactgtc
acagttaatattcttccggccaatgataaaccacctgactgtcttccaaagttttattct
ctgatgattctcgatgacactgctgtgggcacaaacattcaagggtttcatttggcctgt
acagaccaggattcctcccctcagtctttccgttacttcataacttcaggtaatatcaac
aaccactttagactgtctcccagtgctggatcgaacatctctaaactgatacttgcccta
ccttttgattatacacacggtgttgacagagtcacaaactataaccttctaattcaaata
accgatgataacctactggctggaagcaaaaagagtaatattgtacaaacagggagagta
aagatcaacgtcagaattattatccctacacccagtactcagaaaaccactacaactccc
aatataacctatatcagactatcgcaaaacacctaccaaacagactcctggtacatacca
ttcatcatcactttgggttgtttattactgcttggaatgctgggatacatagcatatctt
tatataaactacatccgctctataccaaaatcaaaagtcgagaaaaagtcattggtggaa
gaaaaagaacccaagtcaaagaagcaacacaatgtgattttggaaatgattacacgcaac
acaatatttgatggagaagctgttgatccagtcacaggcaatgtgtaccaatataacaca
aactctggagccagacgttggaaggataccaagttgcccatgaaagaatatggaaatgtt
cgagatgcaactcctaacttaatgtccaatatcaacaacaagacaaacttcacacaaaat
agcaacatgaatgaagtgcatgtggaccagattgataatcagaagactgactatgaccga
acatccctgagaccaccttcaaagttcagaaaacaaaacaaagtcgtagcacgacgacta
gaaccatctcaaactctcaattctttgtctaaagtttcactaaaattaatgtaa
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