Chiloscyllium plagiosum (whitespotted bambooshark): 122559446
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Entry
122559446 CDS
T08871
Symbol
rpap3
Name
(RefSeq) RNA polymerase II-associated protein 3
KO
K23002
RNA polymerase II-associated protein 3
Organism
cpla
Chiloscyllium plagiosum (whitespotted bambooshark)
Brite
KEGG Orthology (KO) [BR:
cpla00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cpla03021
]
122559446 (rpap3)
Transcription machinery [BR:
cpla03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Others
122559446 (rpap3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RPAP3_C
TPR_1
TPR_2
TPR_8
TPR_11
TPR_9
TPR_19
TPR_16
TPR_12
T4_Gp59_C
TERB2
Motif
Other DBs
NCBI-GeneID:
122559446
NCBI-ProteinID:
XP_043564831
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All DBs
Position
19:60324771..60371699
Genome browser
AA seq
515 aa
AA seq
DB search
MAAVAPGTFSRFPAQVPALPDTLHPPEVVSATLVKVWYAVAESDCNLAIALDKSFLKAYL
RRGAARMKLKNFQGAKDDFEMVLNLDAQNFEAQNELRKVNEALVPDQNQSSKDEQMDTSD
EKKLTEAQAKQEAIFEKDLGNEFFKEGKYLEAIECYTRGMAADGTNALLPANRAMAYLKL
EKFAEAEADCSRAISLDNTYSKAFARRGTAKMCLGKMKEAKEDFEMVLLLEPGNKQASTE
LAKINKELALQGVSTQQTSSKSNKGQRIIKPIDKPPHLRSTKPLIRVAIEEVEDTMINTK
KEAAAVSFPFDLAAKTPTMVPAVEETNRIQEENTPGDCSVPTVEAPNAKILKVEEREHHV
MSDKQSVTAATVEKSTERKKAAASLFSHSVIVPQAPANSFQLEADLRKLKNYPEMLYKYI
KQIEPSLYPQLFQKSLEPDILNHILRIVQDSYIRFEEPSLILNVLRNLANVKRFDMAVMF
MSESERKVVKDLFDHLLKSDVEEDSLKALKIRYSV
NT seq
1548 nt
NT seq
+upstream
nt +downstream
nt
atggcggcggtggcgcctggaaccttctcccggttcccggcccaggtgccagcgctaccg
gatacacttcacccaccggaagttgtgtccgccaccttggtgaaggtttggtatgctgtt
gcagaatcagattgcaatttggctattgcgctggataaatccttcttgaaagcatacctt
cgacgaggtgctgctcgtatgaaactaaaaaactttcagggtgcaaaagacgactttgaa
atggtgctaaacctggatgcacaaaactttgaagcacagaatgaactcagaaaagtaaat
gaggctcttgtaccagatcagaatcaatcaagcaaagatgaacaaatggataccagtgat
gaaaagaagctgactgaggcccaagcaaaacaggaggcaatttttgagaaagacttgggc
aatgagttctttaaagaaggaaagtatttggaagcaattgaatgctatactagagggatg
gcagcagatggcaccaatgcacttttacctgccaacagggccatggcttaccttaagctt
gagaaatttgcagaggcagaagctgactgcagccgggctatctcactggataatacttac
tccaaggcatttgcacgaaggggaactgctaaaatgtgcctagggaagatgaaggaagca
aaagaagattttgaaatggtgctgttgctggaaccaggaaacaaacaagcttcaactgaa
cttgcaaaaataaacaaagaattggctttgcaaggagtttcaacacaacagacatcttca
aaaagcaacaaaggtcaacgaataatcaaaccaattgataaaccacctcatttgagatct
actaaaccccttataagagttgctattgaagaagttgaagatacaatgattaatactaag
aaggaagcagcagcagtcagtttcccttttgatcttgcagcgaaaacaccaactatggta
ccagcagtcgaagaaactaatagaattcaggaggaaaacacacctggtgactgctctgtg
ccaactgttgaagcacccaatgccaaaatacttaaagttgaagagagggaacatcatgtc
atgtcagacaagcaatccgttacagctgctactgtagagaaatcaacagaaaggaagaaa
gctgcggcatctcttttttcccattctgtgattgtccctcaagctcctgccaattccttt
caacttgaagcagatctccgcaaactgaaaaactatccagagatgttatataaatacata
aagcaaattgagccctctctctatccacaactgtttcaaaagtctttggaacctgacatt
ctaaatcacattttaagaatcgttcaagattcatacatcaggtttgaggagccatccctc
attctaaatgtcctaaggaacttagcaaatgtgaaaaggtttgatatggcggtaatgttt
atgtcggaatcagaaaggaaagttgtaaaggacttatttgatcatctattgaaatctgat
gttgaagaagattcacttaaagcattgaagatcagatacagtgtatga
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