Chiloscyllium plagiosum (whitespotted bambooshark): 122559494
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Entry
122559494 CDS
T08871
Symbol
caprin2
Name
(RefSeq) caprin-2 isoform X1
KO
K18744
caprin-2
Organism
cpla
Chiloscyllium plagiosum (whitespotted bambooshark)
Brite
KEGG Orthology (KO) [BR:
cpla00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cpla03019
]
122559494 (caprin2)
Messenger RNA biogenesis [BR:
cpla03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Other mRNA localization factors
122559494 (caprin2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Caprin-1_C
Caprin-1_dimer
C1q
Motif
Other DBs
NCBI-GeneID:
122559494
NCBI-ProteinID:
XP_043564935
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All DBs
Position
19:6835145..6891436
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AA seq
1006 aa
AA seq
DB search
MKMKTDKRSPSRGEGGGGGAGGGGPAVQGPAPFIQALAAANSQYQAYETYLENGMICLKH
KIRNIEKRKAKLDDYKERLNREELNQDQLDAVAKYEEVIHNLEFAKELQKTFVALNQELL
KAQKKTLRREQLLRTEMEKRRLRTVLHAKYVLENFKQEHVQNDFRDGINGAFIISRKEIS
LLKDFCKLVCPERDERMSLEDQVELVSNQMWDLLEGSDKIVAGSTYKHLKETISRLLNCA
YFDSIPVPHNGLLDDVEDKIKEVPVTSKTLSGKDTESDLHFLCSNDVQPREFLNRQYVNK
TDYAVKQPEKPRNWESEYVGRKQEDVPKKWDADYMSRKHEETPPTKWDDEYVDKQEELLK
KRDTEYVNNRKLEEQPKKWDVQYAEVQETKRWEAPSVPKESAEPKRILPEPKEKRDRTSK
QSEVKQVSKVVQQAAAEFCSTSSLPKDPELRRQKLQDLMSQIQGTCHFIQDSMLDSDSSQ
SAIGSQKATISLNAAAPKQQKQQKNDTIPSPPKPTSELTVHSSVGGSSGSDDQSSLSGST
NDLSGQTPQSSATRNSESEAYIPPPQIYQTSTPITESLTQKALETNQVTTLPNNQTAVYD
AIMVTPQGLGRQTPVSNSPVSMKTTPFQAMQTVFNVNAPLPPRSEQEVKSDAPYSPAFNQ
SLITASTQTPPQPVSVQSSHAVEQNALTQESLTEEPTSVANGTPVFLPHSQPNNPLPRPS
QPYFGSRGAVRGAARGGRGIVNAYRGSSNGYKGVQIGFDAYRGIPIPGNGTYGPFPNREY
PGMPYTPRESGYQQNYKRGAGVGPRGTMRGGPNYSTAGWSDSSQMSSPEQDSEHFNNSGD
SGQGDSRSITPVDMPVTSQAATLLPVHVYPLPQQMRVAFSTARTSNFTPGSLDQPIIFDL
LLNNLGETFDFQLGRFTCPVNGTYVFIFHMLKLAVNVPLYVNLMKNDEVLCSAYANDGAP
DHETASNHAVLQLFQGDQIWLRLHRGAIYGSSWKYSTFSGYLLYQD
NT seq
3021 nt
NT seq
+upstream
nt +downstream
nt
atgaagatgaaaaccgataagaggtcgccttcccgcggggaaggtggcggcggcggcgcc
ggaggcggagggcccgcggttcaggggccggcccccttcatccaggctctggcagccgcc
aacagccagtatcaggcgtacgagacgtacctggagaatggcatgatctgcctcaagcat
aagatccggaatattgagaagaggaaggcaaaactggatgactataaggaacgcctaaac
agagaagaactcaatcaggatcagttggatgctgtggccaaatatgaagaagtaattcat
aatctggagtttgctaaggagctgcagaaaacctttgttgcactcaaccaagagctgcta
aaagcacaaaagaaaactttacgacgtgagcaactactgaggacagagatggagaagaga
cgccttcgtacagtattgcatgctaaatatgtactggagaacttcaagcaggagcatgtt
caaaatgacttcagagatggcattaatggtgcatttattatttctcgaaaggaaatcagc
ctcctcaaggacttctgtaaacttgtttgccctgaaagggatgaaagaatgtctcttgaa
gatcaggttgaactggtgtcaaatcaaatgtgggacctgttggaaggaagtgataaaata
gtggctggtagcacctataaacacttgaaggaaacaataagcagactattgaactgtgcc
tactttgatagtattcctgtccctcacaatggtttgctggatgatgttgaagataaaatt
aaagaggtaccagtaacttccaagaccctatctggaaaggataccgaatccgatctacat
tttttatgctccaatgatgtgcagccaagagagtttttgaataggcagtacgtgaataaa
actgactatgctgtaaaacagcctgaaaaaccaaggaactgggaaagcgagtatgttggc
aggaagcaagaagatgttcccaaaaaatgggatgctgattacatgagtcgaaaacatgag
gaaacgcccccaaccaagtgggatgatgagtatgttgataaacaggaggagcttctcaaa
aaaagggatacagaatatgtcaacaatagaaagttggaggagcagcctaaaaagtgggat
gtacaatatgctgaagtccaggagactaaaagatgggaagcaccatctgtcccgaaagaa
tctgctgaaccaaagagaattctgcctgaacccaaagagaaacgggatcgtacatcaaaa
caaagtgaagtgaagcaagtgtcgaaggtagtgcagcaggctgctgcagagttctgctcg
acctcctcactgccaaaggatccagaactcaggaggcagaagcttcaagacctaatgtcc
cagatacaagggacgtgtcacttcattcaggattctatgttggattctgactcttcacaa
agtgctattggatcacagaaggctacaatatcactcaatgccgcagctccaaaacaacag
aagcagcaaaagaatgacaccattccatccccacccaagcctacttcagaattgactgtc
cattccagtgttgggggtagttcgggttctgatgaccagtcttcactgtctggttccaca
aacgatctttcagggcaaactccgcagagttcagctacacgcaattcagaaagtgaagca
tacattccgccaccgcagatataccaaacaagtacacccattactgagtccctgacacaa
aaggccttggagacaaatcaggtgactactctgcccaacaaccagactgctgtgtatgat
gcaataatggtaacaccccaaggactgggacgccagactccagtaagcaattctccagtt
agcatgaagaccacaccttttcaggctatgcagactgtgttcaatgtgaatgctcctctt
cctccaagaagtgaacaggaagtgaaatctgatgctccatattcacctgcctttaatcaa
agtttgattacagcaagtactcagactccacctcagcctgtgtctgtccaatcttcacat
gctgtagagcaaaatgctctgacgcaggaatctttaacagaagaacctacatcagttgcc
aatgggacccccgtttttctaccccacagtcagccaaataatcctttaccaagaccaagc
caaccctactttggaagcagaggtgctgtaaggggggctgcacgaggtggcagaggaatc
gttaatgcgtaccgtggttccagtaatggatataaaggtgtacaaataggatttgatgcc
tacagaggaattcccatacctggtaatggaacatatggaccttttccaaatagggagtac
cctgggatgccatatactccaagggagtctggttaccagcagaactacaaacgtggtgca
ggagttgggcctcgtgggaccatgagaggaggtcctaattactcaactgcagggtggagc
gattcatctcagatgagcagtccagagcaagacagtgagcacttcaacaacagtggggat
tctggacaaggggactcacgaagcattactccagtggatatgccagtgaccagtcaagct
gccaccctcttgcctgtacatgtctaccctcttcctcagcagatgagagtggccttctcc
actgcaaggacctctaactttacccctggatccctggaccagcccattatctttgacctt
ctgctcaataaccttggagaaacatttgattttcaattggggcgatttacctgccctgtg
aatggcacctatgtcttcatctttcacatgctgaagctagctgtgaatgtcccactctat
gtaaacctcatgaagaatgatgaagtcctgtgctcagcttatgccaatgatggtgctcca
gatcatgagactgccagcaaccatgctgttctgcagcttttccagggagatcagatttgg
cttcgattgcacagaggtgccatctacggtagcagttggaagtattctaccttttctggc
tacctcttgtatcaggattga
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