Chiloscyllium plagiosum (whitespotted bambooshark): 122559511
Help
Entry
122559511 CDS
T08871
Symbol
pus7l
Name
(RefSeq) pseudouridylate synthase 7 homolog-like protein isoform X1
KO
K06176
tRNA pseudouridine13 synthase [EC:
5.4.99.27
]
Organism
cpla
Chiloscyllium plagiosum (whitespotted bambooshark)
Brite
KEGG Orthology (KO) [BR:
cpla00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
cpla03016
]
122559511 (pus7l)
Enzymes [BR:
cpla01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.27 tRNA pseudouridine13 synthase
122559511 (pus7l)
Transfer RNA biogenesis [BR:
cpla03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
122559511 (pus7l)
Prokaryotic type
122559511 (pus7l)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruD
R3H_PUS7L
PUS7L_N
R3H
Motif
Other DBs
NCBI-GeneID:
122559511
NCBI-ProteinID:
XP_043565018
LinkDB
All DBs
Position
19:complement(11553335..11579122)
Genome browser
AA seq
704 aa
AA seq
DB search
MDVLPPCWVSDHTGFSGTIKNSASDFVVTEINTRGQLVSDIGADSAQDSDDIESEQEKPR
PTQKKRLKKPEKAPETFSGLPIFDKSKNANVALGKINQTADSNLPESAANSPLVQTQGDV
LDLLLGSSLSENLEKFAFSVKESKDAKQEGTEDIARLLLGTFEDKSQRAAIHLAVRQKFP
FLKTVTSCGEIEVRLDPQYSELCQLVSDEEANGFFGFLDAKDRRSKFTFQPSRNKEHRKA
IHHFVSKYFGKLVETKSFLEQDGSSERAAVITVRFRDKITSGRKRTANDCQTTYTAFTLC
KVNMETLEAIACLASELDVVASDFSYAGIKDKKAITSQSMVVKNVTINKLKAKQLSIQSK
GLKVYNLRRATKHLRVGQLKGNHFSIIIRNVSKHQEDDPDSSLTSRVLEAIENVKEKGFV
NYYGPQRFGLGQNVQADQIGLALLKGKLVEAVHLVFTAEEGDDPVNQAKRHFIQTEDAKG
TLALMPEYKTRERMMLRALNRYGNNQEGCARAWLSLPYSMRVLYVHSYCSKVWNRAASFR
LRTYDLKVVEGDLVACDNLERDPLNQENAQVHVVTAEDLKSNIYTINQVVLPMPGNSVQY
PCNKLALWYQETLARDGLQGCKFRIPALQLNIPGCYRRLLAQPQQLVFRWLEDKEMPFAQ
EGCVFATDDSKQPQEMRDSLSVSFSLNSSCYATICLREIMKCNV
NT seq
2115 nt
NT seq
+upstream
nt +downstream
nt
atggatgtgttgcccccgtgctgggtcagtgatcacactggcttcagtggcacaattaag
aattctgccagcgactttgtggtgactgagatcaatacgcgtgggcagctagtcagtgac
attggagctgatagcgcccaggattctgatgacattgaaagcgagcaagaaaagccccgt
ccaacacagaagaagagactgaagaaaccggaaaaagcgccggaaacattttccggtttg
ccaatctttgacaagtcgaagaatgccaatgtcgcactaggcaagattaaccagactgct
gacagcaatttacctgaatctgcagctaattctcctttagtgcaaacccagggagatgtg
ttggatttgcttttgggtagctcactgtcagaaaatctggaaaaatttgccttctcggtt
aaagaaagtaaggacgctaaacaggaggggacagaagacatagctaggcttttacttgga
acctttgaagacaaatctcaacgagcagccattcatttggctgtacggcagaaatttcct
tttctaaagactgttaccagctgcggtgagattgaggtcaggcttgaccctcagtattca
gaactctgccaactagtatctgatgaagaagccaatgggttctttggtttcttagatgca
aaagatagacgttccaagttcacatttcagcccagtaggaataaggagcaccggaaggcc
atccatcattttgttagcaagtactttggaaaactggtggaaacaaagagttttttggag
caagatggcagcagtgagagggctgcagtgattactgtgagatttagagacaaaatcaca
tcaggcaggaaacgaactgccaacgattgccagacaacttacacagcatttaccttatgt
aaggtgaacatggaaaccctggaagctattgcttgcctggcgtcagagcttgacgtggtg
gcatcagatttcagttatgcaggcatcaaggacaagaaagctattacttcccaatcgatg
gtggtaaagaatgtgacaattaacaagttaaaagcaaagcaattatcaatccagagcaaa
ggcctgaaagtgtataacctgcgccgtgcaactaagcacttacgggtgggccagctgaaa
ggaaaccatttcagtattatcatcagaaacgtcagcaagcaccaagaagatgaccctgac
agcagtcttacttctcgagtgttggaagcaattgagaatgtcaaggagaaaggatttgtg
aactactatggacctcagcgttttggtctgggacaaaatgtccaggcagatcagattggt
ttggcgcttctcaagggaaaattggtggaggccgtgcatttagtctttacagcagaagaa
ggagatgaccctgtcaatcaggccaagagacattttattcagactgaggatgccaagggg
acacttgctctgatgccagagtacaaaacaagagagcgaatgatgttgcgtgcattaaac
cgctacggcaacaatcaggagggttgtgcccgggcctggcttagtttaccatactccatg
cgtgtactttacgtccactcgtattgcagtaaggtctggaatagagctgcctcttttcgc
ttgaggacttatgacttgaaggttgtagagggagacttagttgcctgtgataatctcgag
agggatccattgaatcaggaaaatgctcaggtgcacgttgtgacagctgaagatctgaag
tcaaacatttacacaattaaccaagtcgttcttccaatgcctggtaacagtgtccagtat
ccatgcaataaacttgcattatggtatcaggaaactttggctagggatggactacaggga
tgcaagtttagaatccctgcattgcaactgaacatacctggatgctaccggcgcctccta
gcacaacctcagcaactagtgtttcggtggttagaggacaaggaaatgccatttgcacaa
gaaggctgcgtctttgcaactgatgactccaaacagcctcaggaaatgagagactctctt
tctgtgtccttcagtctgaattcgtcatgctatgcaacaatatgtttgagagaaatcatg
aaatgcaatgtgtaa
DBGET
integrated database retrieval system
