Chiloscyllium plagiosum (whitespotted bambooshark): 122559514
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Entry
122559514 CDS
T08871
Name
(RefSeq) sortilin-like isoform X1
KO
K12388
sortilin
Organism
cpla
Chiloscyllium plagiosum (whitespotted bambooshark)
Pathway
cpla04142
Lysosome
Brite
KEGG Orthology (KO) [BR:
cpla00001
]
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome
122559514
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GFIT
Motif
Pfam:
Sortilin-Vps10
Sortilin_C
BNR
BNR_6
Motif
Other DBs
NCBI-GeneID:
122559514
NCBI-ProteinID:
XP_043565023
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Position
19:complement(11656301..11771635)
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AA seq
825 aa
AA seq
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MAAGLAACRLLLVVVVVALLFGCPVSCDHKRDFSELPAHRVEVFQQLATLRGASRYKREA
PRSGSAQQEGGVSLCGTGASDQAKLNKNTHKCTFDDDDGSTVTLAWVGDGTGIILALTTF
NLPVAWLFFGGSSRLYRSKDYGKTFTDVSSLVNNYYIRKEFGINVGPEHSKKVILTAEPK
YFRHGNKGGIIIRSSDSGETFDSVQLPFHPGQPMHYHSSNSDLLLAHSTNHTLFLSQNFG
ISWSTIHKFVYAFSWGPGNTIFFTTHPNGIYDKNERGVLELKKTTDFGKTSRTLLTKVYS
FGFAGRFLFASIISNQSLPRSVYVSADQGESWNKAQLPPVSHDQFYSILAADSEMIFMHV
DEPGNTGFGTIYTSDDRGILFSKSLERHLFSDTSGTTDFTNVTSLRGVYITNVLDEDNNI
RSVITFDSGGEWKPLKKPDNSHCDTTKDSKMCNLHIHAAYSISQDLKVPLLPLSAANAVG
LILAHGSVGDAISTMIPDVYVSDDGGYTWSKALTGPHFYAILDSGGLIVAVESNPDKAIH
TVKYSTDEGQCWKNYTFTNDSFIFVGLVSEPGTKSMNISLWGYRQESIYSTTWLSITIDF
EELLTRDCQEKDYVKWLAHSTDAGEKNDGCILGYRETYQRLAKASVCRNGRDYIVNKEQS
LCPCTKGDYMCDFGYYREGDSDECVEQPDLADHVLEFCLQGKEELLKTQGYRKVPGDKCE
GGFMPNRSEQITNVRCEKVLSLKDPQLPKITVVIIVVSALAAAVLMMIGVVLIFKKYVCG
GRTLVYRYSVLKTNTDEACIADHLDSSRTSTERVYHDDSDVDLLE
NT seq
2478 nt
NT seq
+upstream
nt +downstream
nt
atggccgcgggtctcgccgcttgccgcctcctcctcgtcgtcgtcgtcgtcgcgctgctc
tttggctgcccggtgtcttgcgaccacaagagagacttctccgagttacctgcccaccga
gtggaggtcttccagcagctggcgacccttaggggcgcctcccggtacaagcgagaagcc
ccccgtagtggcagtgcccagcaagagggaggggtgtccctctgtgggactggggcctca
gaccaggccaagttaaacaaaaacacccacaagtgcacatttgacgacgatgatggttct
actgtaacgttggcttgggtcggagatggaactgggatcattcttgctttgactactttc
aacttgccagttgcttggttgttttttggtggatcctcacgactgtacagaagcaaggat
tatgggaaaacatttactgacgtttcgagtcttgtcaacaactattatatacgaaaggaa
tttggaattaatgtaggaccagagcattccaagaaggtaattctgactgctgaaccaaaa
tacttcagacatggaaataaaggtggcataataattcgatcgtctgattcaggtgaaaca
tttgattctgtccaattgcccttccaccctggccagccaatgcactatcattcctccaat
tcagatcttctgctggcccacagtactaatcatacactgtttctttctcagaactttggt
ataagttggtcaacgattcataaatttgtctatgcattctcatggggacctggaaatacc
atattcttcacgactcatcctaatggcatttatgataaaaacgaaagaggggtactggaa
ctgaagaagacaacagattttggaaaaacatctagaacacttctcacgaaggtttactcc
tttggttttgctggccgcttcctctttgcctccattatcagtaaccagtcgctgcccaga
tctgtttatgtatctgctgatcagggtgaatcttggaataaagctcagctacctcctgtt
agccatgatcagttttactctatacttgctgcagacagtgaaatgatcttcatgcatgtg
gatgaacctggcaatactggatttggtacaatctacacttctgatgatcgaggaattcta
ttctccaagtcgctggagcgtcacttgttttctgacacaagtggcacaactgattttaca
aatgttacgtcactacgtggagtctacatcaccaatgtgctggatgaagataacaatatt
cgatcagtgattacatttgacagtggaggcgagtggaaacctttgaaaaagccggacaat
agtcattgtgacacaaccaaggattcaaagatgtgtaaccttcacatccacgctgcatac
agcatctctcaggacctgaaggtccccctactcccactcagtgccgcaaatgcagttgga
ttgattttagcccatggtagtgtaggagatgccatttctacaatgatcccagacgtttat
gtatctgatgatggagggtatacatggtcaaaagcattgactggcccacacttttatgcc
attctcgactcaggcggcttaattgtagcagtggaatccaatccagacaaggccatacac
accgtaaagtactcaactgatgaaggacaatgctggaaaaattataccttcacaaatgat
tcatttatatttgtggggcttgtgtcagaaccaggaaccaagtcaatgaatatcagtctc
tggggatacagacaggaaagcatttattcaacaacttggctgtcaataaccatcgatttt
gaggagctcctaacgagagactgccaggaaaaggattatgtcaagtggttagctcattcc
acagacgctggtgagaaaaatgatggctgcattttgggatatcgagaaacataccagagg
cttgcaaaggcctccgtttgcagaaatggaagggactatattgtgaacaaagaacaaagt
ctatgcccgtgcacaaagggtgactacatgtgtgattttggttactaccgtgaaggagat
agtgatgaatgtgtagagcagcctgacttggctgatcatgtgctggaattctgcttacaa
ggaaaagaagagctgctgaaaacacaagggtatcgaaaagttcccggtgataaatgtgaa
ggtggtttcatgcccaatcgatcagaacaaatcacaaacgtgagatgtgagaaggttttg
tcactgaaagatcctcagttacccaagattactgttgtcatcattgtagtaagtgcgttg
gcagcagcagtgctgatgatgatcggcgttgttcttatttttaagaaatatgtgtgtgga
ggaagaaccttggtctatcgttattcagtcctgaaaaccaatactgatgaggcctgcatt
gctgatcatctggacagcagcagaacaagcactgaaagagtttatcatgatgattctgat
gttgatctactggagtaa
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