Chiloscyllium plagiosum (whitespotted bambooshark): 122559610
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Entry
122559610 CDS
T08871
Symbol
prdm4
Name
(RefSeq) PR domain zinc finger protein 4 isoform X1
KO
K12463
PR domain zinc finger protein 4 [EC:2.1.1.-]
Organism
cpla
Chiloscyllium plagiosum (whitespotted bambooshark)
Brite
KEGG Orthology (KO) [BR:
cpla00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cpla03000
]
122559610 (prdm4)
Transcription factors [BR:
cpla03000
]
Eukaryotic type
Zinc finger
Cys2His2 PRDM
122559610 (prdm4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PRDM2_PR
zf-H2C2_2
zf-C2H2
zf-C2H2_4
zf_PR_Knuckle
zf-Di19
SET
zf-C2H2_jaz
zf-met
PyrI_C
HypA
zf-C2H2_6
DUF5810
Motif
Other DBs
NCBI-GeneID:
122559610
NCBI-ProteinID:
XP_043565327
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Position
19:complement(25975565..25999280)
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AA seq
811 aa
AA seq
DB search
MIGAGCLSRVGLDGYFCSKNLLGSDKPGDSFSMNDINLSPVGMDQLNASSVSSTLPVTGS
HLGMGSPTHNPLPAPGMPVAIPNLSPSLGSLPSALSLMLPMSIGERGVMCSIPERNYTLP
PPPYPHLENSYFRHILPGILSYLADRPPPQYIHSSAISVDGNPALPVSSNPPTLDHYEPN
GAVGLESSIVSIDSRHVGTHNSQNLHQSNNQEVPLNANISMETVSRVNSPISTEGMSEDL
TMNGVTGKPQALSSGSRNHETITVDSVGNNLEAEAVGQNTIIPIHANAIELPVVMEPEQI
TGRVNNMPENSLSDSIHAATINPNPVGVALSSSHSLPSLEPVSLHGSSVGLDRVSVSTIT
TEVSMRTNQVDGSSENLSYVSGSLQMEDSSSNKENLADSFTIWCTVCDRAYPADCPEHGA
VTFIPDTPVSSRARLSIPKQLSLRQSITGEDIGVWSQETIPIRTCFGPLIGEEINLLEVA
DWTNKNNTNIWKIFCNYVLEFLIVTADENICNWMMFVHRARTREEQNLVAYPHNGKIYFC
TSKEIPPNHELLFYYTRDYARQLGVPEHPNVHMCHCGKAYGTYSELKSHLSSHGQSRERK
WKCSICPRAFTSSTKLNVHMMGHMGMKPHKCEFCSKAFSDPSNLRTHLKIHTGQKNYRCE
MCDKSFTQKAHLASHMIIHTGEKNLKCDYCEKMFMRRQDLRQHMLTHTQERQIKCPNCDK
LFWRTTHLKKHLNSHEGRRDFICEKCSKAYLTKYHLTRHLKICKGSKTCLPMQDLEEEDE
DVDSEDEELLQSGRGTCQLNNDNYTTEEGGQ
NT seq
2436 nt
NT seq
+upstream
nt +downstream
nt
atgattggggccggctgcctatccagggtgggactagatggatacttctgcagcaaaaac
cttctggggtcagacaaaccaggagatagcttcagcatgaatgacatcaacctgagccct
gtggggatggatcaactgaatgcttcatctgttagcagcaccttacctgtcacaggaagt
cacttgggcatgggttcacccacccacaaccctctcccagctccaggaatgccagtggca
ataccgaaccttagtccttccttaggctccctcccgtcagctctttcattaatgcttcca
atgagtattggagaacgtggagtaatgtgcagtattccagagcggaattatactttgcca
cctcctccatatccacatttggagaacagctactttcggcacattctcccgggtattttg
tcttacttggctgacagaccacctccccagtacatccattctagcgctatcagtgtggat
ggaaaccctgcactgcctgtttctagcaacccacctacccttgatcattatgaacctaat
ggtgctgtgggcttggaatcaagcatcgtttccattgactcgagacatgtaggcactcac
aactcccagaatctgcatcagagcaacaaccaggaagttccactgaatgctaacatctcc
atggaaacagtttctagagttaatagtcccatctcgacagaagggatgagtgaagatttg
actatgaatggtgtaacaggaaagccacaggcattgtcttctggctccagaaaccatgaa
acaataactgtggactccgtggggaataatttggaagcagaggcagtaggtcagaataca
ataattccaatacatgctaatgcaatagagttaccagttgtcatggaaccagaacaaata
actggtcgggtaaacaacatgccagagaattctctgagtgactccatccatgctgctaca
ataaacccaaatccagtaggagtggcactttcatcttctcactcactgccttcacttgag
ccagtgtctcttcatggatccagtgtaggactggacagagtttctgtttccactattaca
acagaggtctccatgaggaccaatcaggtagatgggtcctcagaaaacctttcatatgtg
tcaggatctctacaaatggaggattccagctccaataaagagaatctggcagattccttt
acgatttggtgtactgtatgtgaccgtgcttatcctgctgactgtcctgaacatggggca
gtaacttttataccagacacaccagtgagcagccgagcccgactgtcaattccaaaacag
ctaagcctcagacagtccatcacgggagaagatattggtgtgtggagtcaagaaacaatt
cccatacgcacttgttttggacctctgattggagaagagattaacttgttggaagttgct
gattggacaaacaaaaacaacactaatatctggaagatattttgcaattatgttttggaa
tttctgatagtgacagcagatgagaacatctgtaactggatgatgtttgtacaccgagcg
aggacacgggaggagcaaaacctagtagcctatcctcacaatgggaagatttatttctgt
acatccaaagagattcctcctaaccatgagctacttttttactataccagggactatgca
aggcaacttggagttccagagcatccaaatgtacacatgtgtcactgtggcaaggcatat
ggtacatacagtgagctgaagtcacatctgagcagtcatggacagagtcgggaaaggaag
tggaagtgttccatctgtccaagagcattcacctcttctaccaaactaaatgttcacatg
atgggacacatggggatgaaaccacacaagtgtgagttctgcagcaaggctttcagcgat
cccagcaatcttcgaactcacctgaaaattcacacaggtcagaaaaactaccgctgtgaa
atgtgtgacaagtcttttactcagaaggctcacctggcctctcacatgataatccacaca
ggagagaagaacctgaaatgtgattattgtgagaaaatgttcatgcggcggcaggaccta
cggcagcacatgttgacccatacacaagagaggcaaatcaagtgtccaaactgtgacaaa
ctcttctggaggacaacacacttaaagaaacatctcaattcacatgaaggaagaagggat
ttcatctgtgagaagtgttcgaaggcatacttaacaaagtatcacttaactagacattta
aagatctgcaaaggttccaagacatgcctgcccatgcaagatctggaggaagaggatgag
gatgtagatagtgaggatgaagaactcttgcagtctggtagagggacctgccagttgaac
aatgacaattacaccacagaagagggtgggcagtag
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