Chiloscyllium plagiosum (whitespotted bambooshark): 122559663
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Entry
122559663 CDS
T08871
Symbol
ttc37
Name
(RefSeq) tetratricopeptide repeat protein 37 isoform X1
KO
K12600
superkiller protein 3
Organism
cpla
Chiloscyllium plagiosum (whitespotted bambooshark)
Pathway
cpla03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cpla00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
122559663 (ttc37)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cpla03019
]
122559663 (ttc37)
Messenger RNA biogenesis [BR:
cpla03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Ski complex
122559663 (ttc37)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_2
TPR_1
TPR_19
TPR_14
TPR_CcmH_CycH
TPR_16
TPR_8
TPR_11
TPR_12
TPR_17
ARM_TT21_C
PPTA
TPR_7
ANAPC3
TPR_30
HAT_Syf1_M
ARM_TT21
TPR_Slam
T7SS_EccA1_N
Motif
Other DBs
NCBI-GeneID:
122559663
NCBI-ProteinID:
XP_043565450
LinkDB
All DBs
Position
2:complement(51843276..51960941)
Genome browser
AA seq
1563 aa
AA seq
DB search
MSNKEVKATLKNAREAIRNKEFKEALKHCKAVLKQDKNNYNAWVFIGVAAAELEQPDQAK
TAYKKATELDPDQLLAWQGLLNLCEKNDTSENKHELLGIYQKLMKLYESSDKQKWHEVCL
KLVDLYHQEKNYLEVAKTWSHVIQLKQHDGASKQELHQMWRKMIQLLADKVESQDNETQQ
LLITAFENVLASMDKIPSDSHQKLSTDYVKFLSKLPHEGNKLKLACETLITQYPDSSSSL
EVLAMHFIQTECFSEEALQCYSRLNKTEPTNGLGLIGVGIKAMQEKKYEEAAKNLTKGLK
QAHSATIAWFYLAEIQFRMHKYEATISSCRSGLELLESSGHYGNAQQKHKLLHLQADAMI
KSGDANNAEKAFDILEQLPGSSEPILLALKGQACLNKGLMKQASQIATDLVASCPDVAET
WELQGLVSYTQKDYIQAEQSFQKALKLKAECGIYYYYLGLAYWFMGEVMRKDKSKTATHL
LKAAKLDTYNGRTFCYLGHYYHDIVQDKNRARGCYKKAFELNNSDEEAGAAAVDLSVELG
DMGTALAILRTVTDQSSAGTAKWAWLRRGLYYMRTNQSSLAVADLQAALRADLKDSNCWE
CLGEAYLSRGGYTAALKAFTKASELNPNSVYNIYKIAAIKQIIGKYAEAVTEYKQIIQNS
KKYVPALKGLGECYLMMTRSALDDCLDGRALDSAEEALQYLARAVQCRPDVSCLWKLIGD
TCTVLHVLSPAKVNIRVSAILIGQDEKRNVHYLDKNELLRLGGRCYGRALTLTSTSANLW
CDLGVNYYRQAQATAEGNIVSELLEKALLCLKKSVMLDSKNHLHWNALGVVACYKGIANY
ALAQHAFIKSVQVEQNNVAAWTNLGATYLKNENIELAHEAFKVAQSLEPSYVTCWIGQAL
IAEAVGSYETMDLFRHTTELGVNTEGAKGYAHWVCSTLQDKSNRNSELYKYNIVQMNAIS
AAQVVMSKYTERIQSDATAFTMLGYLNEYLNLKEQAEVAYHRAFLLLQNTEDEEKLKYAQ
RNWMRALCAAGQYREAIETYMLNPFVEFDDIISLALVYLKKGLLQESAKAYEKALTIAHT
ENEKAHIMIALAMIAFKEGRIDNAKTLLFKCSMLKEPSVESLQALCALGLSKKDTTLTTA
ALNELFKHSDKINSTYETCLLSSGMFSLQANNLAVQRQAAKAVHSNPADPALWTLLSRLV
PQHTPHMAEGGVVAGNIAEILSSHQTKNALLFSAANQLAAGKGTAANEQNNALKTIQKAV
HLYPDDPAVWASLMAACHMENTLSHLENTKPKHTTLEEIFVTTITTKVEAEKTMPTPYLQ
SIENWSLQQAAAGLKEEGRHSEAEAFCTKVLKRHPDHPTVFLLLRQVQCEQLLLSQQRLP
DPVLEELKKTVMSNFTSVTAWHWLAEVYKSQGLMIAAEMCYRQGLQLSSQHGNVNGKLSS
LLRLALLALSLSTIKLQNNRWASLVKEATSEAQKISLCPLAGLFQALLQFIVKMGARETR
RLLERVVYQPGYTESIASVGRWYLLRHLWAKNDDELITVLLQNGKMNGDSRVEELHKKLI
EAS
NT seq
4692 nt
NT seq
+upstream
nt +downstream
nt
atgtccaataaagaagttaaggccaccttgaaaaatgcaagggaagctataagaaataag
gaatttaaagaggcattgaaacattgcaaggctgtgttgaaacaagacaagaataactac
aatgcctgggttttcattggagttgcagcagcagagttggaacagcctgaccaggcaaag
actgcatataaaaaagccacagaacttgatccagatcagttgctggcatggcaggggttg
ctaaatctttgtgagaagaatgatacatctgaaaacaagcatgagctgctgggaatttat
cagaagctaatgaagttgtatgaaagttcagacaaacagaaatggcatgaagtctgctta
aagttagttgatctctaccatcaagaaaagaattatctggaggtcgccaaaacatggagt
cacgtgatacagctaaaacaacatgatggagctagtaaacaagagctccatcagatgtgg
aggaagatgatccagttacttgcagacaaagtagagagtcaggataatgaaacccaacag
ctgttaataacagcttttgaaaatgtccttgcttccatggacaagattccaagtgatagc
catcagaagctttccactgattatgttaaatttctatcaaaactgccacatgaaggaaat
aagctaaaactagcatgtgaaactttgataacccagtatcctgattcttcttcttcactc
gaagtacttgccatgcattttatccagacagagtgctttagtgaagaagctttgcaatgt
tattcaagacttaataaaactgaaccaacaaatgggctaggtcttattggagttggaatc
aaagctatgcaagaaaagaaatatgaagaagctgcaaagaacttaactaaaggattaaag
caggcacattcagcaactatagcgtggttttacctagcagagatccagttccggatgcac
aaatatgaagcaacaattagctcctgcagaagtggtttggagctgttggaaagcagtggc
cattatgggaatgcacagcaaaaacacaagttgcttcatttacaagcagatgcaatgatc
aaatctggtgatgcaaataatgcagagaaagcctttgatatcttggaacagcttcctggc
tccagtgaaccaatactacttgccttgaaaggacaagcttgtttgaacaagggtctgatg
aagcaagcatctcagattgcaacagatcttgtggcttcttgtcctgatgtggcagaaaca
tgggaactccagggccttgttagttatacccaaaaagattatattcaagcagaacaaagt
ttccagaaagctctgaaattgaaagcagagtgtggaatatattactactaccttggacta
gcttactggttcatgggggaggtgatgagaaaagacaagtctaaaactgctacacatttg
ttaaaggctgccaagttggacacatacaatggacgaacattctgctacttaggccactac
tatcatgacatagtacaagataaaaacagagctcgtggttgctacaaaaaagcctttgag
ctaaataatagtgatgaagaagcaggagcagctgctgttgatctcagtgttgaacttgga
gatatggggactgctcttgcaattctgaggacagtgactgatcagtcaagtgctggaaca
gccaaatgggcttggcttagacgaggactttattacatgagaaccaaccagagttcactg
gctgtggcagatttacaagcagccttgagagcagacctgaaagattcaaattgctgggaa
tgtttaggagaagcttatctcagtagaggaggttacactgctgccttaaaggctttcact
aaagccagcgaactgaatccaaactctgtatacaacatttacaagattgcagccattaaa
cagattattggcaagtatgcagaagcagttacagagtataaacagataattcagaattca
aagaagtatgtccctgccctcaaaggcctaggtgaatgctatttaatgatgacacgaagt
gcccttgatgattgtttagatggaagggctttggattcagcagaagaagcacttcagtac
ttagctagagctgtacagtgtcgacctgatgtatcctgtctatggaagctaattggagat
acatgcaccgtgctccacgttttgtcaccagcaaaagttaacattagagtctctgccatt
ctcattggacaggatgaaaagagaaatgtgcattatttagataaaaatgaactgctccga
ctaggaggaagatgctacggacgggcccttacattgacatcgacatctgccaatctgtgg
tgtgaccttggtgtgaactactaccgacaggctcaggctactgcagaagggaatatagtg
tctgagttattggaaaaagcactactgtgcctcaaaaaatcagtgatgttagacagcaaa
aatcatctacactggaatgcacttggagttgttgcatgttataaaggtattgcaaattat
gccctagcccaacatgcattcatcaaatctgttcaggttgaacaaaataatgtagcggcc
tggaccaacctgggggcaacttatttgaagaatgaaaatattgagcttgctcatgaagcc
tttaaggtagcccagtctttggaaccctcgtatgttacatgctggattggacaggcacta
attgccgaagctgttggcagctatgagaccatggatttgtttagacataccacagagctt
ggtgttaatactgagggagctaaaggttatgcacactgggtgtgttcaacattgcaggat
aaatcaaacagaaattctgaattgtacaagtacaacattgtacaaatgaatgcaatatct
gctgcgcaagttgtcatgagcaaatatacagagagaattcagagtgatgcaacagctttc
acaatgttgggttatttaaatgagtatctaaacctcaaagaacaagcagaagtggcatat
cacagagcatttttgctgctccagaatactgaagatgaagaaaagcttaagtatgcacag
agaaattggatgcgagctttatgtgctgcaggtcagtaccgggaggccattgagacttac
atgttgaacccttttgtggagtttgatgacataattagtcttgctctggtttacttgaag
aaagggcttcttcaggagagtgccaaagcttatgaaaaggctttaactattgcccatacg
gagaatgagaaggcacacataatgattgcacttgcaatgattgctttcaaagagggtaga
atagataatgccaagactttactcttcaaatgttccatgctgaaggagcccagtgtagaa
agtctgcaggctttatgtgctctgggtttgtcgaagaaggataccaccctcactacagca
gcacttaatgaactgttcaaacattcagataaaatcaactcaacctatgaaacctgcctt
ctttcttcaggaatgttttctttgcaagcaaacaatttagctgtgcagagacaagcagct
aaagctgtccatagcaatccagctgatcctgccctttggacattattatccagacttgtt
ccacaacatactccccatatggcagaaggtggagtagttgctggcaatattgcagagatt
ttaagttcccatcagacaaagaatgcacttttgttcagtgctgcaaatcagttggcagct
ggtaaaggtacagcagccaatgaacaaaataatgcattaaaaactattcaaaaggcagtc
catctgtatccagatgatcctgctgtttgggccagtttaatggcagcctgtcacatggaa
aatacattatcacatttagaaaatacaaaaccaaaacatactacattagaagagatcttt
gtcacaacaatcactaccaaagttgaagcagagaagaccatgccaactccttatcttcaa
tccatagagaactggtctctgcaacaggctgcagctggattaaaagaagagggcaggcac
tctgaagctgaagccttttgcactaaagttctgaagaggcacccagaccatcccacggtg
ttcctgttgctgagacaggttcaatgtgaacagctgttactttcacagcaacggcttcca
gatccagttttagaagaactgaaaaagacagtgatgtcaaacttcacctcggtgacagca
tggcattggctggcagaagtatataaatctcagggtttaatgatagcagcggaaatgtgt
tacaggcaaggactgcaactatcttcacagcacggcaatgtgaatggcaaactgtcaagt
ctactcagattagcattgcttgccctctctctcagtacgattaaacttcagaacaatcga
tgggcatcattagtcaaagaagcaaccagtgaagctcaaaagatctctctttgtcctctt
gctggtctattccaagcactcctgcaatttatagttaaaatgggagcaagggaaacacga
cggctgctggagagagtggtatatcagccaggttacacagagagcattgcatcagttggc
cgttggtacctcttacgacatctgtgggccaaaaatgatgatgaacttatcacagtatta
cttcaaaatggcaaaatgaatggagattctagagttgaagagctgcacaagaagcttatt
gaagcatcttaa
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integrated database retrieval system
