Chiloscyllium plagiosum (whitespotted bambooshark): 122559694
Help
Entry
122559694 CDS
T08871
Symbol
lsm8
Name
(RefSeq) LSM8 homolog, U6 small nuclear RNA associated isoform X1
KO
K12627
U6 snRNA-associated Sm-like protein LSm8
Organism
cpla
Chiloscyllium plagiosum (whitespotted bambooshark)
Pathway
cpla03018
RNA degradation
cpla03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
cpla00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
122559694 (lsm8)
09123 Folding, sorting and degradation
03018 RNA degradation
122559694 (lsm8)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cpla03019
]
122559694 (lsm8)
03041 Spliceosome [BR:
cpla03041
]
122559694 (lsm8)
Messenger RNA biogenesis [BR:
cpla03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
122559694 (lsm8)
mRNA degradation factors
5'-3' decay
Lsm complex
122559694 (lsm8)
Spliceosome [BR:
cpla03041
]
Complex B
U4/U6.U5 tri-snRNP components
LSm proteins
122559694 (lsm8)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LSM
Motif
Other DBs
NCBI-GeneID:
122559694
NCBI-ProteinID:
XP_043565534
LinkDB
All DBs
Position
19:37529470..37538964
Genome browser
AA seq
141 aa
AA seq
DB search
MLNDLDCTECVKIAKGICLSSGEHSAIVCLLPDCQWLRCEGIVVHHSGRFAASVQGTVAV
VTADGRMIVGTLKGFDQTINLILDESHERVFSSQQGVEQVVLGLYIVRGDNVAVIGEIDE
ETDSALDLGNIRAEPLNSVVH
NT seq
426 nt
NT seq
+upstream
nt +downstream
nt
atgctgaatgacctcgattgcactgaatgtgtcaaaattgcaaaaggcatttgcttgtct
tcgggtgaacactcagcgatagtgtgtttacttccagattgtcaatggctgcgttgtgag
gggattgtcgtgcaccattctggaaggtttgctgcatctgtccagggaacagttgcagtc
gttacagcagatggaagaatgattgtgggaaccctaaaaggatttgaccaaaccatcaac
ctaattttggatgaaagtcatgagcgcgtatttagttcacaacaaggcgtggaacaagta
gtacttggcttgtacatagtaagaggagacaatgtagcagtgattggtgaaatagatgaa
gaaacagattctgcattggatttgggaaacatcagagctgaacctttaaattctgtggta
cactga
DBGET
integrated database retrieval system
