Chiloscyllium plagiosum (whitespotted bambooshark): 122559786
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Entry
122559786 CDS
T08871
Symbol
ppfibp1b
Name
(RefSeq) liprin-beta-1b isoform X1
KO
K27096
liprin-beta
Organism
cpla
Chiloscyllium plagiosum (whitespotted bambooshark)
Brite
KEGG Orthology (KO) [BR:
cpla00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cpla04131
]
122559786 (ppfibp1b)
Membrane trafficking [BR:
cpla04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
122559786 (ppfibp1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SAM_1
SAM_2
DUF16
DUF4845
Motif
Other DBs
NCBI-GeneID:
122559786
NCBI-ProteinID:
XP_043565741
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All DBs
Position
19:50397160..50574735
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AA seq
1075 aa
AA seq
DB search
MTDASEMLAAALEQMDGIIAGSKSLDYSNGLFDCQSPNSPYIGGLRVLHLVEDLRGLLEL
MESEEKDGLRSQIPDSTAELLSEWLQSHLTNGHISVTGDAYQDRLARLEGDKESLVLQVS
VLTDQVEAQGEKIRDLESCLDEHREKLNGTEEMLQQELLSRTSLETQKLDLMAEVSNLKI
KLSALEKDRLEYEERYKDTESLFNLITELRQQMEKVEVELALFQEKRSRFGDQEGLFQEV
NDLRVKVVEMESEKNQFEKKLKSTKSLMAKLSSLKIKVGQMQYEKQRMEQKSQALKDELV
QLKEQLEQKEAEIKRLCSEMSFKTEMDESDNGAEESYKKKLKEKNLEVYKMKKAVESLMA
ANEEKDRKIEELRQSLNRYKKVQDMVMSVAHKKVKEGDSDESLNGGSAGVNISETLEMEL
RSPTTPNPAAEGVPAAEPVEIHTSILQVPIPVVSSTPKTHAPQVDKKMDPDVEAASDVGE
IQPSDISSLIEETVICDSPILSEVYSFGSQEKLRTEEENKKLSLEPVQSPLELAGNILLL
IKNKACMEITKFASLPPKPPNGHQNSLDDESAASKKARASFGRGFFKIKGGKRTASAPNL
DRSRSASAPMLAETERELERVDSAGLPLRAAEADSCQLFPTSPELKKKSKGIKRLFGKLK
RSQSTTFTPDDVTDSDFKRGGTRSTSGPKLGWSRDLQNTKTDLDAPFAKWTREQVCNWLD
DQGLGMYISGSKSWITSGQTLLHASQQDLERELGIKHPLHRKKLQLALQAFGSEEEDNKG
KLDYNWVTRWLDDIGLPQYKTQFDEGRVDGRMLHYVTVDDLLSLKVGSVLHHLSIKRAIQ
VLRINNFEANCLRRRPSDENNITPAEVSRWTNHRVMEWLRSADLAEYAPNLRGSGVHGGL
MVLEPRFNVETLAMLLNIPPNKTLLRRHLATHFNLLVGPDAQQQKREAVESPDYSLLTAT
AKVKPRKLAFSNFGSLKKRKQDEEEYVCPMELGLPAGTGFRQGNKQTRGIDIRVYNDEDL
DRIEQMDDSEGTVRQIGAFSEGINNLTHMLKEDEMFKDLSAGSPCTSMTDEDSNV
NT seq
3228 nt
NT seq
+upstream
nt +downstream
nt
atgactgatgccagtgagatgttggctgctgccttggagcaaatggatggtatcattgca
ggttcaaagtctttagactactcaaatggcttgtttgactgtcagtcaccaaactcccca
tatattggtgggctgcgtgtattacacctagttgaagatcttcgtggactgctagagcta
atggaaagtgaggaaaaagatggattgcggtctcaaataccagactcaactgcagaactt
ctgagtgaatggttacagagccatctgacaaatggccatatctctgtaaccggtgatgca
taccaggatagactggcacgattagaaggagataaagaatccttggttttgcaagtgagt
gttctaacagaccaggtggaagcccaaggagagaagattcgagacctagagagttgtctg
gatgaacaccgagaaaagttaaatggtacagaagagatgttacagcaggagctcttgagc
aggacatcattggagactcagaaattggatctgatggctgaggtgtcaaatctgaagatc
aagctgagtgcattggaaaaggataggttggaatatgaagaaaggtataaagatactgag
tcattgtttaacctaataacagagctgagacagcagatggagaaagtggaagtggagcta
gcattattccaggaaaagaggtcacggtttggtgatcaagaggggttatttcaagaagtt
aatgatctaagagtaaaagtggttgaaatggaaagtgaaaaaaatcagtttgaaaagaaa
ctgaaatcaaccaagtcattaatggctaagctctctagcctgaaaatcaaggttggtcag
atgcagtacgagaagcagcgaatggagcaaaaatctcaagcattaaaggatgagctggtg
caactgaaggaacagttggaacagaaagaagctgagatcaagaggctatgttctgaaatg
agtttcaaaactgagatggatgaaagtgacaatggggcagaggaaagttataaaaagaag
ctgaaggaaaaaaatcttgaagtatataaaatgaagaaagcagttgaatcgctgatggca
gcaaatgaggaaaaggatcgaaagatagaagaattgcgacagtccttgaataggtataag
aaggtgcaggatatggtgatgtcagtggctcataagaaagtgaaagaaggtgacagtgat
gaaagcctgaatgggggatctgctggagttaacatcagtgaaaccttggaaatggaattg
cgttctccaactacaccaaacccagcagcagagggagtgccagcagcagagccagttgaa
atccacactagcatccttcaagtgccaattcccgtagtgtcatctactcctaagactcat
gctccacaggtagataagaagatggaccctgatgttgaagcagcatctgatgttggtgaa
atacagccaagtgacatctcttcattaattgaagaaactgtcatatgtgacagtcctata
ttgtcagaagtatattcgtttggcagtcaggagaaactgagaacggaagaggagaacaag
aaattatctctcgaacctgttcagagcccattggagctggcagggaacattttgctcttg
attaagaataaagcatgtatggagatcactaagtttgcatctctgccaccaaagccacca
aatggacatcaaaattctctggatgatgaaagtgcagcttcaaaaaaagccagagcttct
tttggccgtggattcttcaagatcaaaggtggcaagcgaacagctagtgcacctaacctg
gatcgcagtcgaagtgcaagtgcaccgatgctagcagagacggagagagaattggagcgt
gtggatagtgctggtctcccactgcgtgcagcagaggctgacagttgtcagctatttcca
acttccccagaattgaaaaagaaatcaaaaggaattaaaagattgtttggaaagcttaaa
agaagtcagtcaaccacctttactcctgatgatgtgactgattcagatttcaagagaggt
ggaaccagaagtacatcaggtcccaaacttggctggtcccgggatctgcagaatactaaa
actgatctggatgctccatttgcaaagtggaccagagagcaagtgtgtaactggctggat
gaccaaggattaggcatgtacataagtggttccaaatcctggatcacttcaggccagact
ttgctgcatgcatctcaacaggacctggaaagggagcttgggatcaagcatcctctgcac
agaaagaagttacaactagctctgcaggcatttggctctgaagaagaagataataaggga
aagctggattacaattgggtgacaaggtggctggatgacattggattaccccagtacaag
actcagtttgatgaaggaagagttgatggtcgaatgctccactatgtgactgtggatgac
ctgttgtcgctaaaagttggaagtgttctccatcacctcagcatcaagagggcaattcag
gttctccgaataaataattttgaagctaattgtcttcgtagaagaccatctgatgagaat
aacatcacccccgctgaagtctcccggtggacgaatcaccgagtgatggaatggctacgc
tcagcagatttggcagaatatgcacccaatttgcgtggtagtggagtgcacggtggatta
atggttctagaacctcgttttaatgtggaaacactagcgatgctgctaaacatccctccc
aacaagacactacttagacgacacttagctactcactttaatttgctggttggtcctgat
gctcagcagcagaaacgagaggctgtggaatccccagactattctctcctaacagccact
gccaaagtaaagccaagaaagctggcattcagtaattttggaagcttgaagaaacggaaa
caggatgaagaagaatatgtatgtccaatggaattgggacttcctgcaggaactggtttc
agacaaggaaataaacagacacggggaatagacatacgagtatataacgatgaagacttg
gacaggatagagcagatggatgattctgaaggaacagtgaggcaaattggagcgttctct
gagggaatcaataacctaacacatatgctaaaggaggatgagatgtttaaagatttaagt
gcaggctctccatgcaccagcatgactgatgaggattcaaacgtgtaa
DBGET
integrated database retrieval system
