Chiloscyllium plagiosum (whitespotted bambooshark): 122559804
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Entry
122559804 CDS
T08871
Symbol
polr3b
Name
(RefSeq) DNA-directed RNA polymerase III subunit RPC2
KO
K03021
DNA-directed RNA polymerase III subunit RPC2 [EC:
2.7.7.6
]
Organism
cpla
Chiloscyllium plagiosum (whitespotted bambooshark)
Pathway
cpla03020
RNA polymerase
cpla04623
Cytosolic DNA-sensing pathway
Brite
KEGG Orthology (KO) [BR:
cpla00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
122559804 (polr3b)
09150 Organismal Systems
09151 Immune system
04623 Cytosolic DNA-sensing pathway
122559804 (polr3b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cpla03021
]
122559804 (polr3b)
Enzymes [BR:
cpla01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
122559804 (polr3b)
Transcription machinery [BR:
cpla03021
]
Eukaryotic type
RNA polymerase III system
RNA polymerase III
Core subunits
122559804 (polr3b)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_1
RNA_pol_Rpb2_7
RNA_pol_Rpb2_2
RNA_pol_Rpb2_4
RNA_pol_Rpb2_3
RNA_pol_Rpb2_5
Motif
Other DBs
NCBI-GeneID:
122559804
NCBI-ProteinID:
XP_043565797
LinkDB
All DBs
Position
19
Genome browser
AA seq
1136 aa
AA seq
DB search
MRETMEMVAAEFGDLDPESLAAPVREVEEKWKLLPAFLKVKGLVKQHIDSFNYFINVEIK
KIMKANEKVTSDADPMWYLKYLNIYVGVPDVEESFNVTRPVAPHECRLRDMTYSAPITVD
IEYTRGSQRIIRNALPIGRMPIMLRSSNCVLTGKTPAEFAKLNECPLDPGGYFIVKGVEK
VILIQEQLSKNRIIVDADRKGTVGASVTSSTHEKKSRTNLVVKQGRYYLRHNTLSEDIPI
AIIFKAMGVESDQEIVQMIGTEDPVMSAFAPSLEECQKAQIFTQMQALKYIGNKVRRQRM
WGGPKKTKMEEARELLASTVLTHVPVKEFNFRAKCIYTAVMVRRVILAQGANKVDDRDYY
GNKRLELAGQLLSLLFEDLFKKFNSELKKIADQIIPKQRAAQFDVVKHMRQDQITNGMVN
AISTGNWSLKRFKMDRQGVTQVLSRLSYIAALGMMTRISSQFEKTRKVSGPRSLQPSQWG
MLCPSDTPEGEACGLVKNLALMTHITTDMEDGPIIKLAFNLGVEDVNLLCGEELSYPSVF
IVFLNGNILGVIHDHQKLVKTFRLMRRAGYINEFVSISTNLTDRCVYISSDGGRLCRPYI
IVKNRQPAVTNKHIEELSQGYRSFEDFLHEGLVEYLDVNEENDCYIALYEHMINKFTTHL
EIEPFTLLGVCAGLIPYPHHNQSPRNTYQCAMGKQAMGTIGYNQRNRIDTLMYLLAYPQK
PMVKTKSIELIDFEKLPAGQNATVAVMSYSGYDIEDALVLNKASLDRGFGRCLVYKNAKC
TLKRYTNQTFDKVMGPMLDAATRKPIWRHEILDADGICSPGEKVENRQVLVNKSMPTVTQ
TPLEGAAQSQQPQFRDVPITYKGATDSYIEKVMISSNSEDAFLIKILLRQTRRPEIGDKF
SSRHGQKGVCGLIVPQEDMPFCDSGICPDIIMNPHGYPSRMTVGKLIELLAGKAGLLDGR
FHYGTAFGGSKVKDVCEDLIHYGYNYLGKDYVTSGITGEPLEAYIYFGPVYYQKLKHMVL
DKMHARARGPRAVLTRQPTEGRSRDGGLRLGEMERDCLIGYGASMMLLERLMISSDAFEV
DVCGQCGLLGYSGWCHYCKSSCHVSSLRIPYACKLLFQELQSMNIVPRLKLARYNE
NT seq
3411 nt
NT seq
+upstream
nt +downstream
nt
atgagggagactatggagatggtggcggctgaatttggggatttggatccggaatcgttg
gcggcaccggtccgggaggtggaggaaaaatggaagctgcttcctgcttttctgaaggtc
aaaggcctggtgaagcagcacattgactcattcaactacttcataaatgtcgagattaag
aagattatgaaagccaatgagaaggtgaccagtgatgctgatcctatgtggtatttaaaa
tacctgaatatttatgttggagtgccagatgttgaagaaagcttcaacgtaaccagacct
gttgctccacatgagtgtcgcctgagagatatgacttactccgccccaattacagtggac
attgaatacactagaggaagccagcgaataatacgcaatgctttacccattggcagaatg
cctataatgttgcgcagctctaactgtgtgcttactgggaagacccctgcagaatttgca
aaactaaatgaatgtcctctggacccaggtggctatttcattgttaaaggtgttgaaaaa
gtaattcttatccaggaacaactttcaaaaaacagaataattgtggatgcagacagaaaa
ggaactgttggtgcctctgtgaccagctctactcatgagaagaaaagtagaacaaacctg
gttgtgaagcaagggaggtactacctgagacacaatactctgtcagaggacatcccgatt
gcaataatattcaaggcaatgggtgtagagagtgatcaagagattgtacagatgattggt
acagaggacccagtgatgtctgcctttgctccaagcctggaagagtgtcagaaagctcag
atcttcacccagatgcaggcattaaagtatattggaaacaaagtgcgcagacagcgaatg
tggggaggaccgaaaaaaaccaagatggaggaggcccgggagctgcttgcatcgactgta
cttacccatgtgcctgtcaaagaattcaacttccgtgcaaagtgtatttatactgccgtg
atggtacgcagggtgattctagcccaaggggctaacaaagtcgatgacagagattattac
ggtaacaagcgtttggagctggctgggcagcttctgtctctgctttttgaagatttgttc
aaaaagttcaattctgagctgaagaagattgctgaccagattattcccaagcagcgggca
gcccagtttgatgttgtgaagcacatgcggcaagaccagatcactaatggcatggttaat
gccatatcaaccgggaattggtctctcaaaagattcaaaatggaccgtcagggtgttact
caggtgctgtctcgtttgtcttatattgctgccctgggtatgatgaccaggatctcctct
cagtttgaaaagacgagaaaagtgagtggtcccagatcgcttcagccatcacaatggggg
atgctgtgcccatcagacacacctgaaggagaggcttgcggtttggtgaaaaatctggct
ttgatgacccacatcacaacagatatggaagatggccccataattaaactcgcctttaat
cttggtgtcgaagatgtaaatctgctctgtggggaagaactgtcatatccaagtgtgttc
attgtatttctaaatggtaacatcttgggtgtgatacacgatcatcagaaactggtgaag
acgttccgtttgatgcgccgagcaggatacatcaatgaatttgtttctatctctacaaat
ctgacagatcgctgtgtttatatttcctctgatggaggcagactttgcaggccctacatt
attgtgaagaacagacaaccagcagtgacaaataagcatattgaagagctatctcagggc
tacaggtcctttgaagacttcctgcatgaaggattagtggaataccttgatgtcaatgaa
gaaaatgattgctatattgcactttatgagcatatgatcaacaaatttacgacccacttg
gaaattgagccatttacgcttcttggtgtatgtgcagggctaattccctaccctcaccac
aatcagtctccaaggaacacctaccagtgtgccatggggaagcaagccatgggtaccata
ggctacaaccagcggaatcggattgacaccctcatgtacctgctcgcctatcctcagaaa
cccatggtgaaaaccaaatccatagagctgattgactttgaaaagctcccagcggggcag
aatgccacagtggctgtgatgagctacagcggttatgatattgaagatgctctcgtccta
aataaggcttctttggacagaggttttggaagatgtctggtgtataaaaatgctaaatgt
acacttaaacgttatacaaatcagactttcgataaagtcatgggtccaatgcttgatgca
gctacacggaagccaatttggcggcatgaaattttagacgcggatggtatttgctcgcca
ggtgagaaagtggaaaacagacaagtgctggtgaacaaatcaatgccgacagttacgcag
actccgttagagggagccgcacaatctcaacagccgcagtttcgcgatgtcccaatcacc
tacaaaggagcaacagattcatatattgagaaggtgatgatctcttcaaactcagaagac
gcatttttaattaaaattctgctgagacagacaagacgtcctgagattggtgacaaattc
agcagccgacatggccagaaaggtgtctgtggtttgattgtgcctcaggaagacatgcca
ttctgtgacagtggaatctgtccagacatcatcatgaatcctcacggttacccctcccga
atgacagttggtaagttgattgaactgttggcagggaaagctggtctcctggatggcagg
ttccactatggcactgcctttggtggcagcaaagtaaaggatgtttgtgaggatttgata
cattatggttacaattatcttggcaaggattatgtaacctctggaatcactggtgagcca
ttggaagcatacatctactttggtcctgtgtactatcagaagctgaaacacatggtgctg
gataagatgcatgcacgagcgcgaggtccccgggccgtcctcaccaggcaaccgactgaa
ggacgatcacgagatggaggtttgcgtcttggtgagatggaacgagattgcctgattggt
tatggagccagcatgatgctgttggagaggttaatgatctccagtgatgcttttgaggtg
gatgtctgtggacagtgtggtctgctgggatactctggctggtgtcattattgcaagtca
tcgtgtcatgtctcctctctgcggatcccgtatgcctgtaaactactatttcaggaactg
cagtccatgaacattgtgcccagactgaagctggccaggtacaacgaatga
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