Chiloscyllium plagiosum (whitespotted bambooshark): 122559826
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Entry
122559826 CDS
T08871
Name
(RefSeq) POC1 centriolar protein homolog B-like isoform X1
KO
K16482
centriolar protein POC1
Organism
cpla
Chiloscyllium plagiosum (whitespotted bambooshark)
Brite
KEGG Orthology (KO) [BR:
cpla00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
cpla03036
]
122559826
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
cpla03037
]
122559826
Chromosome and associated proteins [BR:
cpla03036
]
Eukaryotic type
Centrosome formation proteins
Centriole proteins
122559826
Cilium and associated proteins [BR:
cpla03037
]
Primary cilia and associated proteins
Other primary cilia associated proteins
122559826
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_Prp19
WD40_WDHD1_1st
WD40_CDC20-Fz
Beta-prop_WDR90_POC16_2nd
Beta-prop_EML_2
Beta-prop_CAF1B_HIR1
WDR55
EIF3I
Beta-prop_TEP1_2nd
WD40_MABP1-WDR62_2nd
Beta-prop_IFT122_1st
Beta-prop_EIPR1
Beta-prop_WDR75_1st
WDR90_beta-prop_4th
Beta-prop_EML
NBCH_WD40
Beta-prop_TEP1_C
WD40_MABP1-WDR62_1st
ANAPC4_WD40
WD40_RFWD3
Beta-prop_DCAF4
Beta-prop_RIG_2nd
Beta-prop_IFT140_1st
Beta-prop_SPT8
Beta-prop_Vps41
Beta-prop_SCAP
eIF2A
Beta-prop_WDR19_1st
Beta-prop_HPS5
Beta-prop_NWD2_C
Ge1_WD40
Beta-prop_WDR35_TULP_N
Beta-prop_Nup120_160
Beta-prop_DCAF12
Beta-prop_IP5PC_F
Cytochrom_D1
Motif
Other DBs
NCBI-GeneID:
122559826
NCBI-ProteinID:
XP_043565848
LinkDB
All DBs
Position
19:54236831..54357377
Genome browser
AA seq
475 aa
AA seq
DB search
MASALEDPNLEHNFKGHKDVVTSVDFNPNNKQLATTSIDKCLMIWNLKPQTRAYRFTGHK
DAVMSVHFSPSGHLVASASRDKTVRLWTPNVKGTSTTFTAHSAVVRSVNFSCDGNFLVTA
SDDKSIKMWNTHQQRFLLSFKGHNNWVRSARFSPDGRLVVSCSDDRTVKIWDTVSRECIN
TFTDYRGFANFVDFNPSGTCIASAGTDNTVKLWDIRINKLLQHYQVHSASVNCLSFHPSG
NYLITASSDCTLKIMDLLEGRLLYTLHGHQGPVLAVTFSRHGEYFASGGSDSQVLVWKTN
FDSIPYNKVLKSLSVRTNPDPAPHITDIHPRIPHLHTSGPQLIQINPRGHIVDMQSSDPP
VVDTGIDFLSKHKSKAAESHSPSLVTNQVNSCLDPSDRVSSHAMDPASGDPGITSTLEDH
TGIPPTLASTLGHIVEQLDVLTQTVSILEQRLTMTEDKLQECLGNQQTVQQVTSS
NT seq
1428 nt
NT seq
+upstream
nt +downstream
nt
atggcctccgctctggaggatccaaacttagaacacaactttaaaggtcataaagatgtg
gtcaccagtgttgattttaacccaaacaacaagcagctagcaactacctcaattgataag
tgccttatgatatggaacttgaagccacaaaccagagcctaccgatttacaggacacaag
gatgctgtgatgtctgtccacttttccccgtcaggtcatctggtggcatctgcttcacga
gataaaactgttcgactctggactccaaatgttaaaggaacatcaactacattcacagcc
cacagtgccgtagttcgcagtgtgaacttctcctgtgatggaaatttcctggttacggca
tctgacgacaaatcaataaagatgtggaacacgcatcaacaacggtttcttttatcattt
aaaggacacaataactgggttcgttctgccaggttctctccagatggaagacttgtagtc
tcctgtagtgacgacagaactgttaaaatctgggacacagtgagcagagaatgtatcaat
actttcactgattacagaggatttgccaactttgtggattttaatcccagtggtacctgt
attgcctcagcaggaactgacaatactgtgaagctttgggatattcgtataaacaaactg
ctacaacattaccaagtccacagtgcttcagtgaactgcttgtcttttcatccttctggt
aactatcttatcactgcatcgagtgattgtactctcaagataatggatttgttggaagga
agattgctttacactcttcatggacaccagggccctgtacttgctgtaacattttctagg
catggagagtattttgcttctggtggaagtgattcacaggtgttggtatggaagacaaat
tttgacagtattccttataacaaggttctgaaaagccttagtgtaagaacaaatcctgac
cctgctcctcatatcactgatattcacccaagaattcctcatctgcatacttcaggacct
cagttgattcagataaatcccaggggacacatagttgacatgcaatcatctgatcctcca
gtagtggacactggaatcgactttctctctaaacacaagtcaaaagcagcagagtcgcac
agtccctcactagtaacaaaccaggtgaacagttgtctggatccttctgatcgggtaagc
tcccatgcaatggacccagccagtggtgatcctggtataactagcactctggaggaccac
acaggcatcccaccaacacttgccagcacattagggcacattgtagagcaactggatgtt
ttaacccagacagtgtcgatcttagaacagcgcttgacgatgactgaagacaaacttcag
gagtgtctaggcaatcaacagactgtgcaacaagtaacgtcatcttag
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