Chiloscyllium plagiosum (whitespotted bambooshark): 122559831
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Entry
122559831 CDS
T08871
Name
(RefSeq) host cell factor 2-like isoform X1
KO
K27390
host cell factor 2
Organism
cpla
Chiloscyllium plagiosum (whitespotted bambooshark)
Pathway
cpla05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
cpla00001
]
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
122559831
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
cpla03036
]
122559831
03029 Mitochondrial biogenesis [BR:
cpla03029
]
122559831
Chromosome and associated proteins [BR:
cpla03036
]
Eukaryotic type
Histone modification proteins
HMT complexes
MLL-HCF complex
122559831
Mitochondrial biogenesis [BR:
cpla03029
]
Mitochondrial quality control factors
Regulator of mitochondrial biogenesis
Other regulator of mitochondrial biogenesis
122559831
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Kelch_HCF
Kelch_KLHDC2_KLHL20_DRC7
Beta-prop_FBX42
Beta-prop_ATRN-LZTR1
Kelch_1
Kelch_2
fn3
Kelch_FKB95
Motif
Other DBs
NCBI-GeneID:
122559831
NCBI-ProteinID:
XP_043565857
LinkDB
All DBs
Position
19:55059584..55142760
Genome browser
AA seq
1500 aa
AA seq
DB search
MAAPSPKWRRVTGATGPVPRPRHGHRVVAIKELMIIFGGGNEGIVDELHVYNTATNQWFI
PAVRGDIPPGCAAYGFICDGTRILVFGGMVEYGKYSNDLYELQASRWEWKKLKPKPPKNG
PQPCPRLGHTLCLVGNKCYLFGGLANDSEDPKNNIPRYLNDLYTVELRSGSGVVGWDIPV
THGTPPPPRESHTAVVYKDSKKPKMIIYGGMSGCRLGDLWILDVESLVWTKPATKGSTPL
PRSLHSATVIGNKMFVFGGWVPLVMDDVKVATHEKEWKCTNTLAYLHLADGYIWTPVVSD
TLEDNVPRARAGHCAVAIHTRLYIWSGRDGYRKAWNNQVCCKDLWYLETEKPPAPSRVQL
VRASTNSLEVCWGAVPTADAYLLQLQKYDMPPSAATTTTTTPTMATPALSNTTLPQKTSC
SPVSPTPAIPAAPLHSPLPVSKVASPTSVLIPGMTSAVTTTQVSAAQVSAMPSAAAQLVT
VSQQAVQTVKAAVSSLPAGVRLVVPAQSTTNAVPSVVSVNTPATTMLKTAAAQVATSTGS
LGPSSTRPIITVHKSGALTVAQQTQVVTTVVGGVTKTFTLVKSPIQVGGGGSLISNLGKM
MTLVQTAPVQTGAPITGQATAGSLAQFIQAKGPFPPGTIVRLVTAADGKPATIITTSQAG
GIGTKQTILGLSSVSPASSKPGATTIIKTIPVSALMAQPNVTGVSASPGIKSPITIITTK
VVTSGTGAPAKIITAVPKFTTGQPGVTQVVLKTPGTPGTILRTVGGTPVTVSGVRLVTPV
TVSSSKPTVSTLLVKGTTGVTTLGTVTAAATTIHAGVTGLASSNFTTPVTALARITTLAT
QAISTTIDPLAVAPTTLQVTPGIVSTSSVVSTEPVFVISGEAVPSRVTGLVAHASETQVP
VAAEQATTAVTVSDNSVQTSDQQIQQAADEPAHETTETNTTNTATSSTANMSLNQIQPPD
ASNNGMPESVHGETATAGTTNTATTVSAACTGAVTTVTQSTPTPGPSLQAASTASDVTSS
SSASLSDLSTSQLAPATETLQNPGSSELQSSSEQTLKNFAQAVMPQLAENQQPDQSEAFQ
DPQEKMESGKAQEQLSQNSEQQHQHHVTATEPFVIEAKPADSIQHKTTGGDVPISSLPKA
TECSAVKPPSEDLASEPGVPNVDSSQHLQHCQNLITPTPEQPAQQKDPLQPPVPLSTVSA
PPQTAMLSPNDTNIQSSQQGQVTEDAHQPTTSSPATSLPSSSSTAAVSPNEVSTSNPLAN
GKQENSCAQLKVTPKKEGNPWYDVGIIKGTNSVVTHYHLPPEGSHGEDASANIPDYSMLK
KQELLPGTAYKFRVAGINACGRGSFSEICAFKTCLPGFPGAPSAIKITKSVDGAHLTWEP
PATTAGKILEYSVYLAVRSIQVTETKSGSPAQLAFMRVYCGAKPSCVVSSSHLANAHIDC
TTKPAIIFRIAARNEKGYGPATQVRWLQDTGVQGSKGTVKRPTTSPDSTKSGGAKKSKSE
NT seq
4503 nt
NT seq
+upstream
nt +downstream
nt
atggcggctccctctcccaaatggagacgggtaaccggagccaccggaccggtcccgcgg
ccccgacacggtcaccgggtggtggcgatcaaagagttgatgatcatattcggcggtggc
aacgaggggatcgtggacgagctgcacgtctacaacaccgccaccaaccagtggtttatc
cctgcagttaggggggacatcccaccaggttgtgcagcttatggcttcatctgcgacggc
accaggatcctggtatttggaggaatggtagaatatggaaagtatagcaatgacctatat
gaattgcaggcgagcagatgggagtggaagaaattaaaaccaaaacctcctaaaaatggt
ccacaaccctgtccccgccttggccacaccttgtgtcttgttgggaataagtgttattta
tttggtggcctggctaatgacagtgaagacccaaagaataatattccaaggtacttgaat
gacttgtacactgtggagcttcgatctggatcaggagtggtaggatgggacattcctgtt
acacatggcaccccgccacctccaagagaatctcacactgctgttgtttataaagattcg
aagaaaccaaagatgataatttatggaggaatgagtggatgtagacttggagatctttgg
atattggatgtggaaagcttggtgtggactaaaccagcaaccaaaggttcaacaccactc
cctcggagtttgcattctgctactgttattggaaataaaatgtttgtctttggtggctgg
gtaccacttgtgatggatgatgtgaaagttgccactcatgaaaaggaatggaagtgcaca
aatacacttgcttacttacatttagcagatggctacatctggacacctgtagtctcagac
acgttggaggacaatgtaccaagggccagggctggccactgtgctgttgcgattcatact
cgtctttatatttggagtggaagagatggctaccggaaggcttggaataatcaagtctgc
tgcaaagatctttggtatttggaaactgaaaagccccctgcaccttcccgtgtgcagttg
gtcagagctagcacaaattcactcgaagtatgttggggtgcagttcctacagcagatgcc
tatcttcttcagctgcaaaagtatgatatgccaccatcagccgccaccaccactaccacc
acacctaccatggcaactccagctttgagcaatactacactaccacagaagacttcatgt
agccctgtttctcctacgcctgctattcctgctgcaccattgcattcaccactccctgtt
tctaaagttgcttctcccacgagtgtgctgatccctggaatgacaagtgctgtaactaca
acgcaggtctctgctgctcaggtatctgcaatgccttcagcagcagcccagctggtcaca
gtttcccaacaagctgtgcagacagtaaaagctgctgtttcttccttacctgctggagtt
cgtcttgtcgttccagctcaaagcaccactaatgctgttccctctgttgtaagtgtgaac
accccggccacaacaatgctgaagacagcagctgcacaagtggcaacatcaactggctct
ctaggcccatcttcgacccgacctattatcactgtacataaatcgggtgcattgaccgtg
gctcagcagactcaagttgttactactgtcgtgggtggtgtcacgaaaacgttcacactt
gtcaaaagcccaattcaagttggcggtggaggctccttgatctccaatctagggaaaatg
atgactcttgttcagacagctcctgtacaaaccggtgctccaatcacaggccaggccact
gctgggtctttggcacagttcatccaggcaaagggtccttttcctccagggactatagtg
aggcttgtaacagcagcagacggtaagccagcaacaataatcacaacgtcacaagctggt
ggaataggtacgaagcaaacgatcctgggtcttagcagtgtctcaccagccagcagtaaa
cctggagcaaccaccatcataaaaaccatccctgtttcagcactgatggctcaacccaat
gttacaggtgtatctgcatcccctggtataaaatctccaataacaatcattacaacaaaa
gtagtcacatcaggaactggagctccggcaaagatcattacagctgtgccaaaatttact
acagggcagcctggggtcacacaggtggttctgaagactcctggaacacctggtaccatc
ctgcgaacagttggtggtactcctgtcacagttagtggagtcagattagttactccagtc
actgtatcttcaagcaagccaacagtctcaactttgctagtaaaaggaacgacaggtgtt
actacattaggtactgtgacggctgcagcaactacaattcatgctggagtaactggtctt
gcatcatcaaacttcactacccctgtcacggctctggctagaataacaacgctggcaaca
caagcaattagcacaactattgatcctttggctgtagcaccaacaacattgcaagttaca
ccaggaattgtctcaacttcttctgtagttagcaccgagcctgtttttgtgatatcagga
gaagcagtgccctctcgtgtaactggcttggttgcacacgctagtgaaactcaggtgcca
gtggctgcagaacaagccacaactgcagtaactgtttcagataatagtgtacaaacttca
gatcaacaaatacaacaagcagcagacgagccagctcatgaaactacagaaacaaatact
acaaacacagctacctccagtactgcaaatatgtctcttaatcaaattcagccaccagat
gcaagtaacaatgggatgccagaaagtgtgcatggagaaacggcaactgcaggaacaacc
aatacagcaacaaccgtttcagcagcatgcactggggcagtgaccactgtgacacagtct
acaccaactccaggcccttcgttgcaggctgcttcaacggcatcagatgtgacttcaagc
agcagtgcgtctttgtcagatctgagcacatcgcagttggcacctgccactgagactctt
caaaacccaggaagctctgagcttcagtcgtcttccgaacagacattaaagaactttgct
caagcagtaatgccacagttggctgaaaatcagcaacctgatcagtcagaggccttccag
gaccctcaagagaaaatggaaagtggtaaagcacaggagcagttgagtcaaaactcagag
cagcagcaccagcaccatgtcactgccactgaaccctttgttattgaagcaaaaccagca
gatagtatccaacacaaaacaactggtggagatgttccaatatcctcattgccaaaagcc
acagaatgcagtgcagtaaagcctccctcggaagatcttgcttcagaaccaggtgtgcct
aatgtagattcctctcagcatttgcaacattgccagaaccttatcactccgactccagag
cagccagcacaacaaaaggatccactgcaacctccagtgccactgagcacagtgagtgct
cctcctcaaacagcaatgctgagtcctaatgatacaaacatacagagtagtcagcaaggc
caggtcacagaggatgcccaccaacctaccacttcaagtcctgccacttcacttccatca
tcctcttccacagcagctgtgtcaccaaatgaagtctctactagtaatccgctagcaaat
gggaaacaagaaaattcttgcgcacaattaaaggtaacgccaaagaaagaaggcaatcca
tggtatgatgttggaatcatcaaaggaaccaactctgtggtaactcactatcacttgcca
ccagagggcagccacggagaggatgcaagtgctaatattccagactacagcatgctcaaa
aagcaagaactcctgccaggaactgcatataagttcagagttgctggaatcaatgcatgt
ggaaggggctcattcagtgagatatgtgcattcaaaacctgtctccctggattccctgga
gctccatctgctataaaaattaccaagagtgtagatggtgctcatcttacctgggaaccg
cctgcaacaactgctggcaaaattctggagtactctgtttatttagcagtgcgtagcatt
caggtgacagaaacaaagtctggaagcccagcgcagttggcctttatgcgggtgtactgt
ggtgcgaagccatcttgtgtagtgtcctcgtcacaccttgcaaatgcacatattgattgt
acaacgaagcctgccataatttttaggattgcagcgcggaatgagaagggatatggaccg
gctacacaagttagatggcttcaagacacaggtgttcaaggaagcaaaggcactgtaaaa
cggccgacaacatcaccagatagcactaaaagcggcggtgccaagaagtcaaagtctgaa
tga
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