Chiloscyllium plagiosum (whitespotted bambooshark): 122559888
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Entry
122559888 CDS
T08871
Symbol
rbl1
Name
(RefSeq) retinoblastoma-like protein 1
KO
K04681
retinoblastoma-like protein 1
Organism
cpla
Chiloscyllium plagiosum (whitespotted bambooshark)
Pathway
cpla04110
Cell cycle
cpla04218
Cellular senescence
cpla04350
TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:
cpla00001
]
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
122559888 (rbl1)
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
122559888 (rbl1)
04218 Cellular senescence
122559888 (rbl1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cpla03000
]
122559888 (rbl1)
Transcription factors [BR:
cpla03000
]
Eukaryotic type
Other transcription factors
Pocket domain Rb
122559888 (rbl1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RB_A
DUF3452
Motif
Other DBs
NCBI-GeneID:
122559888
NCBI-ProteinID:
XP_043565931
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Position
20:60063836..60126537
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AA seq
734 aa
AA seq
DB search
MPSGESRDGSGRSLRDSFDKLCQDLNMDLESGAEAWENLQRIRLNYTLEGETLHWLACAL
YVACRKSITPTVGKGTMEGNGVSLTRILRSSKLSLIQFFSKMKKWADMANLCQEFRERVE
QLERNFEVSTVIFKKFEPIFLDMFQNRHEDQSRLQRSRKQRRLPCSTSDAFSFCWTLFVY
TKGNFRMIGDDLVNSYHLLLCCLDLVFGNALLCPNRKELLNPNFEAGLPPEFNSQDYKPP
VQPPCIIDKLCDLHDGLTVEAKGIKEHYWKPYIKKLFERKILKGNSELLVGLLDVNNFTD
NNKAINKEYEEYVLTVGDFDERIFLGEDADEEIGTPSKSAVDVSVGKLSARIQVECNLQQ
HFEKTKSLAPSTPLTGRRYLKEKELVVTPVSSATQSVSRLQTMVMGLKNTPSELLLQVFN
SCSRNPVEAITARMKKMGETFCHHYVQPMESQAGSHIDFAIRRLRLAEILYWKILETVML
QENRRNPGKDMTVLLEQDIFHRSLMACCLEIVLSSYSSQRIFPWIIAILNLSPFYFYKVI
EVLIRAEDGLSRDMVKHLNNIEEQILESRAWSHDSALWKALFGTDSKVPTCEEVTFPSNF
ETGNGGPTHLPMMPLSPIVHPRVKEVRTDIAGTFNKRDIPPPASPLSVHDRFTSPSAGSA
KRRLFGDDSALDAHVNIAQNNVSQSPGLRIIQTQTITNENITLSPGQTVVTMATATVTAT
NGQTLTIPVQGSSY
NT seq
2205 nt
NT seq
+upstream
nt +downstream
nt
atgcccagcggagagagccgggacggcagcgggaggtcactccgcgacagctttgacaag
ttgtgtcaggacctgaatatggacttggagagtggggctgaggcttgggagaaccttcag
aggattcgcctcaactacaccctggagggagaaactctgcactggcttgcttgtgcctta
tatgtagcctgtcgaaaaagcatcacgccaactgtcggcaagggaacaatggaaggaaac
ggtgtgtcactaacaagaatcctgcgctcatcaaagttaagcctaattcagtttttcagc
aagatgaagaaatgggcagatatggccaatttgtgccaagaattcagggaacgcgtggaa
cagttggaaaggaattttgaagtctcaactgtaattttcaaaaaatttgaacctatattt
ttggacatgtttcaaaatcgtcatgaagatcagtctcgccttcaaagaagcagaaaacag
cggcgccttccatgcagcacatctgatgcttttagtttttgctggaccttatttgtatat
actaaaggcaatttccgtatgattggagatgaccttgtaaattcttaccatctcttgctt
tgttgcctggatctcgtgtttggaaatgctttactgtgtcctaatagaaaagaactgctt
aacccaaattttgaagcaggattgccaccagagtttaacagccaggactataaaccccca
gtgcaacctccatgtatcattgacaagctatgtgacttgcatgatggactcactgtagaa
gcaaaaggcatcaaggagcactactggaaaccttatattaaaaagctgtttgagagaaag
attctgaaagggaacagtgagctcctcgtaggacttctggatgtaaacaattttacagac
aacaacaaagcaataaacaaggaatatgaagagtatgttctgaccgtgggggattttgat
gagcggatatttctgggagaagatgctgatgaagaaatagggactcctagcaagtctgca
gtggatgtttcagttgggaaactgtcagcaagaatccaagtagagtgcaaccttcaacag
cacttcgaaaaaacaaaatctttagcaccttcaacacccttgacaggaagacggtacttg
aaggagaaagaactggttgtaacaccagtgtcctcagccacacagagcgtgagtcgttta
cagaccatggtaatgggactcaaaaacaccccaagtgagcttctgctgcaggttttcaac
tcctgttcacggaacccagttgaagctataacagcccgcatgaaaaagatgggtgagact
ttctgccatcactatgtacaaccaatggaaagccaggctggttctcatatagattttgct
atccggcggctgagacttgctgaaatcttgtattggaaaatcctggagacagtgatgctg
caggaaaatcgccgaaaccctgggaaagacatgactgtcttactggagcaagatattttc
catcggtctctgatggcttgctgcctggagatagttctctcctcttatagttcccagcgt
atattcccatggattatcgccatcctgaatcttagtcctttttacttttacaaggtgata
gaagtgctgattcgggcagaggacggtctttctcgtgacatggtgaagcatctcaacaat
attgaagagcaaattttagagagtcgagcttggagccatgactcagctctttggaaagct
ttgtttggaacagacagtaaggttccaacatgtgaagaggtgacttttccttccaatttt
gaaactggtaatggaggtcccacccacctgccaatgatgccattgtctcctatagtacac
cctcgagtaaaggaagttcggacagacattgctgggacctttaacaaacgagatattcct
cctccggcatcacctctatctgttcacgatcgattcacctcgccctctgcagggagtgct
aaaaggagactttttggtgatgacagtgcgttggatgcccatgtcaatattgctcagaat
aatgttagccaatcacctggactaaggatcatccagacacaaactataaccaacgaaaac
attaccctgtctcctgggcaaactgttgtaaccatggcaacagctactgtaacagctacc
aacggtcaaacgctaactatacctgtacaaggctcctcgtactga
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