Chiloscyllium plagiosum (whitespotted bambooshark): 122559969
Help
Entry
122559969 CDS
T08871
Symbol
rbck1
Name
(RefSeq) ranBP-type and C3HC4-type zinc finger-containing protein 1
KO
K10630
RanBP-type and C3HC4-type zinc finger-containing protein 1 [EC:
2.3.2.31
]
Organism
cpla
Chiloscyllium plagiosum (whitespotted bambooshark)
Pathway
cpla04217
Necroptosis
cpla04621
NOD-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
cpla00001
]
09140 Cellular Processes
09143 Cell growth and death
04217 Necroptosis
122559969 (rbck1)
09150 Organismal Systems
09151 Immune system
04621 NOD-like receptor signaling pathway
122559969 (rbck1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cpla04121
]
122559969 (rbck1)
Enzymes [BR:
cpla01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.31 RBR-type E3 ubiquitin transferase
122559969 (rbck1)
Ubiquitin system [BR:
cpla04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
RBR proteins
122559969 (rbck1)
Multi subunit type E3
LUBAC complex
122559969 (rbck1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LTM
Zn_ribbon_RanBP
IBR
zf-RING_2
zf-C3HC4_2
zf-C3HC4
zf-RING_UBOX
zf-RING_5
IBR_1
zf-RING_11
zf-C3HC4_4
Motif
Other DBs
NCBI-GeneID:
122559969
NCBI-ProteinID:
XP_043566013
LinkDB
All DBs
Position
20:complement(52378740..52427467)
Genome browser
AA seq
522 aa
AA seq
DB search
MAASSRMTSKNLNMDLPEKVEAVAQKLSRAIELGDKETAIQCAELLAEKHIPVTVQIKEA
VFPQHEIKSGLEPTTSSLRGECAVIELKSTLHRFLLSAVYNDYSFHPKLQQWIIAHRLAK
DHETLQFHGIRKDGDTAFMYLLSGKQANLRQRQCELDRILLLQAAETASGMFNSKLNSED
AFLKLEARGAQVQSNEANTLPEESAKIGWVCSGCTYINKPTRPGCEMCSTARPDNYQVPD
IYQPDEEELQRMKNEEESFKQYEQSKLLKRQKNYKLLLETDEQNLISTGEDFECPICLNI
LENGEGVTLRECLHAFCKDCLKQTILSSTEADVTCPYMDQLYSCESKILEREIKYLLTES
EYRTYLDRSLAIAENQSENSYHCQTPDCKGWCIYEDDVNEFNCPLCKKKNCLLCKAIHEG
MNCKQYQDDLKIQAENNKAAKQTADMLTALLQKGDAMNCPKCKIVVQKKSGCDWIRCTMC
KTEICWVTKGPRWGPAGTGDITGGCRCRVNGKPCHPNCQNCH
NT seq
1569 nt
NT seq
+upstream
nt +downstream
nt
atggcagcatcgagtaggatgacctcaaaaaatctaaacatggacctgccggaaaaagtg
gaagctgttgcacagaaactgagcagagcgattgaactgggagacaaggaaacagcaatt
cagtgcgctgagctcctggcagagaaacatatccctgttactgtccaaatcaaggaggct
gtctttcctcaacatgaaatcaagtcaggacttgaacccacaacctcctctctaaggggt
gagtgtgctgttattgagctaaagtcaaccctacacaggtttcttctatcagcagtctat
aatgattacagttttcatccgaaactgcagcagtggatcattgctcatcgattggcaaag
gaccatgaaaccttgcaattccatggcattcgaaaggatggggacacggcatttatgtat
ctcctatcaggcaagcaagccaacctcagacagaggcagtgtgaactggatcggatccta
cttctacaagcagcagagacagccagtggtatgttcaattcaaaactgaacagtgaagat
gcttttcttaagttggaagcacgtggtgcccaagtacagtcaaatgaagcaaacactttg
ccagaggaatcagcaaagattggttgggtgtgttcaggttgcacatacattaataaacca
acccgtccaggttgtgaaatgtgtagcacagccagaccagacaactaccaagtcccagac
atatatcaacctgatgaagaagagctccagaggatgaagaatgaagaagaaagttttaaa
caatatgaacagtccaagctgctgaagcgacaaaagaattacaaactcttgttggaaaca
gatgaacaaaacctaatatcgactggggaagattttgaatgtccaatttgtttaaacatc
ttggagaatggtgaaggagtgactcttcgagaatgtttacacgccttctgcaaagactgt
ctgaagcaaacaatcctgagcagcactgaagctgatgtgacgtgtccgtacatggatcag
ctatattcatgtgaaagcaaaatcctggaacgcgagataaaatacctcctgacggagagc
gagtatcgcacgtacttagacagaagcttagcaattgctgagaatcaaagtgagaatagc
tatcactgtcagaccccagactgcaagggctggtgcatttacgaagatgatgtcaatgag
tttaattgtcccctctgtaagaagaagaactgtctgctgtgcaaggcaatacacgaagga
atgaattgcaaacagtaccaggatgacctgaaaattcaagctgaaaataacaaagctgca
aaacagactgctgacatgctcacggcattgttgcagaaaggggatgccatgaactgtcct
aaatgcaagattgtggtacagaagaaaagtggctgtgattggatacgctgcaccatgtgt
aaaacagaaatttgctgggtgacaaagggacctcgctggggacctgcgggcacaggtgac
atcactggaggatgccgttgccgtgttaatggtaaaccatgccatcccaactgccagaat
tgccactga
DBGET
integrated database retrieval system
