Chiloscyllium plagiosum (whitespotted bambooshark): 122559971
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Entry
122559971 CDS
T08871
Symbol
stx16
Name
(RefSeq) syntaxin-16 isoform X1
KO
K08489
syntaxin 16
Organism
cpla
Chiloscyllium plagiosum (whitespotted bambooshark)
Pathway
cpla04130
SNARE interactions in vesicular transport
Brite
KEGG Orthology (KO) [BR:
cpla00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04130 SNARE interactions in vesicular transport
122559971 (stx16)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cpla04131
]
122559971 (stx16)
Membrane trafficking [BR:
cpla04131
]
SNARE
Syntaxin (Qa)
Stx-TGN / EE
122559971 (stx16)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNARE
ATG17_like
Syntaxin
Prominin
MCPsignal
Syntaxin_2
Endonuc_BglI
DUF4191
Orf78
ETRAMP
DUF2116
WXG100
DUF5345
T3SS_needle_E
Fusion_gly
DUF6548
EVI2A
Motif
Other DBs
NCBI-GeneID:
122559971
NCBI-ProteinID:
XP_043566015
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All DBs
Position
20:327660..380137
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AA seq
333 aa
AA seq
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MATRSLTDAYVLMRNRAAQSRQLLAEQVSTKPGQVLSLALGRGSGGGSGSAAELDEIADD
RMALVSGISLDPEAAIGVTKKLPPKWVDGVEQIQFDITRIKQKMKELAGLHDKYLNRPTL
DDSSEEEHAIEITTQEITQMFHRCQRAVQSLQSKWRSCTEQEERVLRNVVSSLAQALQDL
STNFRHAQSSYLKRLKNREERSKHFFDTSVPLMDDGEDNNLYDKGFTHDQLLLVEENTLM
VEEREKEIRQIVQSISDLNEIFRELASMIVEQGTILDQIDYNVEQSCMKTEEGLKQLQKA
EQYQKKNRKMLVIVILFVIVVVLIIVLIGVKSR
NT seq
1002 nt
NT seq
+upstream
nt +downstream
nt
atggctacccgcagcctgaccgatgcctatgtgttgatgcggaaccgagcggcccagagc
cggcagttgctggccgagcaagtgagtacaaagccgggacaggtcctgtccttggccctg
ggccgaggcagcggcggcggcagcggcagcgctgcggagttggatgagatagctgatgat
cgtatggcattggtgtctgggatcagcctggatccagaagctgccattggcgtaactaag
aaactgcctccaaagtgggtggatggagtggagcagattcagtttgacatcaccagaata
aaacagaagatgaaggagctggctggtttacatgacaagtatctgaaccggccaacactg
gatgacagcagtgaggaggagcatgcgatagaaatcaccacacaggaaataacacagatg
ttccaccggtgtcagcgagcggtacagagcctgcaaagcaaatggcgcagttgtacagaa
caggaagaacgggtccttcgaaacgttgtctcttctctagcacaagcccttcaagatctg
tcgactaactttcggcatgcccagtccagctatctcaaacgtttgaagaatcgagaggaa
aggtccaaacacttttttgatacatctgtgccactaatggatgatggtgaagacaacaat
ctttatgacaaaggttttacccacgatcagctactcctggtggaagagaatactctgatg
gtggaagaacgagaaaaggagatccgacaaattgtgcagtcaatatcggacttgaatgaa
attttcagagagctggccagcatgatcgtggagcaggggaccatcttggaccagatagat
tataatgtggaacagtcctgtatgaaaacagaagagggcttgaagcagttacagaaggca
gagcaataccaaaagaagaatcgaaaaatgttggtcattgtgatcttgtttgtgattgta
gtggttctcattatcgtgttgataggcgtcaaatcaaggtga
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