Chiloscyllium plagiosum (whitespotted bambooshark): 122560009
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Entry
122560009 CDS
T08871
Name
(RefSeq) troponin C, skeletal muscle-like isoform X1
KO
K12042
troponin C, skeletal muscle
Organism
cpla
Chiloscyllium plagiosum (whitespotted bambooshark)
Pathway
cpla04020
Calcium signaling pathway
cpla04814
Motor proteins
cpla04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
cpla00001
]
09130 Environmental Information Processing
09132 Signal transduction
04020 Calcium signaling pathway
122560009
09140 Cellular Processes
09142 Cell motility
04814 Motor proteins
122560009
04820 Cytoskeleton in muscle cells
122560009
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
cpla04812
]
122560009
Cytoskeleton proteins [BR:
cpla04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Troponins
122560009
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EF-hand_7
EF-hand_1
EF-hand_8
EF-hand_6
EF-hand_5
EF-hand_9
AIF-1
EH
SPARC_Ca_bdg
EF-hand_11
EF_EFCAB10_C
p25-alpha
CmlA_N
Motif
Other DBs
NCBI-GeneID:
122560009
NCBI-ProteinID:
XP_043566094
LinkDB
All DBs
Position
20:complement(8628106..8641489)
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AA seq
162 aa
AA seq
DB search
MPMTEQQADARSYLSEEMIAEFKAAFDMFDADGGGDISTRELGQVMKILGQNPTREELDA
IIEEVDEDGSGTIDFEEFLVMMVRQMKEEAKGKSEEELAEFFRVFDTNFDGFIDRDELLA
IIKCGDECVTDEEVDELMREGDRNNDGKLDFDEWVKMMENVQ
NT seq
489 nt
NT seq
+upstream
nt +downstream
nt
atgccaatgacagaacaacaagcagacgcgaggtcttacctcagcgaggaaatgatcgct
gagtttaaggccgcatttgacatgtttgatgctgatggtggtggtgacatcagcaccagg
gagttgggtcaagtgatgaaaatcttgggtcagaaccccaccagagaagagttggatgcc
atcattgaggaagtggatgaagatggaagtggtaccattgactttgaagagttcttggtc
atgatggtgagacagatgaaagaggaggcgaaaggaaagtctgaagaagagttggcagaa
ttctttcgtgtatttgatacgaattttgatggtttcatcgatcgtgacgagttgttggca
atcatcaagtgtggtgatgagtgtgttacagatgaggaagttgatgaactgatgagggag
ggggacagaaacaacgatggcaaacttgattttgatgaatgggtgaagatgatggagaat
gtccaataa
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integrated database retrieval system
