Chiloscyllium plagiosum (whitespotted bambooshark): 122560028
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Entry
122560028 CDS
T08871
Symbol
rprd1b
Name
(RefSeq) regulation of nuclear pre-mRNA domain-containing protein 1B isoform X1
KO
K15559
regulator of Ty1 transposition protein 103
Organism
cpla
Chiloscyllium plagiosum (whitespotted bambooshark)
Brite
KEGG Orthology (KO) [BR:
cpla00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cpla03021
]
122560028 (rprd1b)
Transcription machinery [BR:
cpla03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
122560028 (rprd1b)
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GFIT
Motif
Pfam:
CREPT
CID
CCDC113_CCDC96_CC
DUF7293
FmiP_Thoc5
Motif
Other DBs
NCBI-GeneID:
122560028
NCBI-ProteinID:
XP_043566123
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Position
20:12574432..12623380
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AA seq
380 aa
AA seq
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MSSFSESALEKKLAELSNSQQSVQTLSLWLIHHRKHAGIIVHVWHRELKRAKPSRKLTFI
YLANDVIQNSKRKGPEFTKAFEGVLVDAFSHVARESEQSCKKQMERVLNIWQERIVYDID
FIQQLKLTVDESNSPLPVENAGSKVVYDQPPSCPSSSERQFRSNRVRNAEVVKGHESATS
DSSCSISSDTRYLGEEKRAPKRSYPVAEDEEDDDYRVNYSPIDTGTGPMLTENLIKALQD
LENAASGDATVRQKIASLPQEVQDVSLLENIADKAAAERLSKIVDEACLLLAEYNGRLAA
ELDDRRQLARMLTEYINSQKEILGEKEKKLAEYKQKLAQVTQVRKELKSHIQNLPDLSLL
PNVTGGLAPLPSAGDLFSSD
NT seq
1143 nt
NT seq
+upstream
nt +downstream
nt
atgtcctccttctctgagtccgccctcgagaagaagctcgccgagctgagcaattcgcag
cagagcgtgcagaccctctccctgtggctcattcatcatcggaaacacgcagggataatc
gtacacgtctggcaccgggagctgaagcgagctaaaccaagcaggaaattgacattcatc
tacctggctaatgatgtcattcagaatagtaagaggaaaggtcctgaattcaccaaggct
tttgagggagttcttgtggatgctttttcacatgttgccagagaatctgagcagagttgt
aagaaacaaatggaacgagtcctgaatatctggcaggaaagaattgtctatgatattgat
tttattcaacaacttaagttaactgtggatgaatctaacagtccacttccagtagagaat
gctggttctaaagtcgtatatgatcaaccaccatcttgcccatcatccagtgaaaggcaa
tttcgatctaacagagttcgtaatgccgaggttgtaaaaggtcatgaatcagcaacatct
gactcttcatgcagcatctcatctgataccagatatctaggtgaagagaaacgagcacca
aaacgtagctatcctgttgctgaagatgaagaagatgatgattacagagtcaactactcc
cctatagacactggcacaggtccaatgttgactgaaaatttgattaaagctttgcaagac
ttggaaaatgcagcatcaggagatgcaacagttcggcagaagattgcatcattgcctcaa
gaagtgcaagatgtttcactcttggaaaatatagcggataaagcagcagctgaaagactt
tcaaaaattgttgatgaggcatgtttgctgctcgcggagtataatgggcggttggcagca
gagctggatgaccggagacagctggcacgaatgctgactgaatacatcaacagtcagaag
gagattctgggggagaaagagaaaaaactagcagaatacaaacagaaactggctcaagta
acacaagttcggaaagaactgaaatctcacattcagaatttgccagacctttcattgctt
ccaaatgttacaggaggtttagcaccattgccctctgctggtgaccttttctctagtgac
tga
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