Chiloscyllium plagiosum (whitespotted bambooshark): 122560052
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Entry
122560052 CDS
T08871
Symbol
nfatc2a
Name
(RefSeq) nuclear factor of activated T-cells, cytoplasmic 2 isoform X1
KO
K17332
nuclear factor of activated T-cells, cytoplasmic 2
Organism
cpla
Chiloscyllium plagiosum (whitespotted bambooshark)
Pathway
cpla04020
Calcium signaling pathway
cpla04148
Efferocytosis
cpla04218
Cellular senescence
cpla04310
Wnt signaling pathway
cpla04370
VEGF signaling pathway
cpla04625
C-type lectin receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
cpla00001
]
09130 Environmental Information Processing
09132 Signal transduction
04310 Wnt signaling pathway
122560052 (nfatc2a)
04370 VEGF signaling pathway
122560052 (nfatc2a)
04020 Calcium signaling pathway
122560052 (nfatc2a)
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
122560052 (nfatc2a)
09143 Cell growth and death
04218 Cellular senescence
122560052 (nfatc2a)
09150 Organismal Systems
09151 Immune system
04625 C-type lectin receptor signaling pathway
122560052 (nfatc2a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cpla03000
]
122560052 (nfatc2a)
Transcription factors [BR:
cpla03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
RHR (Rel homology region) NF-AT
122560052 (nfatc2a)
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Gene cluster
GFIT
Motif
Pfam:
RHD_dimer
TIG
Motif
Other DBs
NCBI-GeneID:
122560052
NCBI-ProteinID:
XP_043566181
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Position
20:19055562..19196843
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AA seq
965 aa
AA seq
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MSFIYNEPDQQVDSEEFDFSALFDNSHDEDFATREAENVPASHKGIVHPSGIGYPTIDVS
HYGSQSCSSMASAVLSGEHMSEYSQAENRDFKCYLEAVKPPVSSGVESPRIEITPSPGLF
HVTPHAASCGEQTYHSPTVIPRVTLPVPGSESIVYRDPLSPASSGSSTSWHSFVSHESSC
SHYGMSPQTSPLTSPCVSPKNGSEEYQGQGAHHSPRTSPVNSPSTHIENWQGARSPSPTP
RTSSRSSSPCGKRRYSCDRSRTPSPQASPRVIAIEESNVHQFSNSASLADAMSTLTTDSN
HDLGEVLPIKARIMDLTPPSSLKTDMCKDEKLASFATLNFAELSGQCQDVKKDIYSIDPF
FLMPPHPLHRTKPKPPCSIPSLPPLEWQLLSSSDPYELKIEIQPKPHHRAHYETEGSRGA
VKAPNGGHPVVQLHGYMENKPLSLHIFIGTADERLLRPHAFYQVHRITGKTVSTTSYEKI
CGNTKVLEIPLLPENNMKAVIDCAGILKLRNADIELRKGETDIGRKNTRVRLVFRVHIPQ
VSGRTVSLQVASNPIECSQRSAHELPMVEKQSTDNCFVTGGQRMILTGQNFTTESKVLFT
EKTHDGQQIWEVEATVDKDKSQPNILFVEIPRYRNQHIRTPAKVNFCVVNGKRKRSQPQR
FTYLPAVPIIKTEPTDECEDTIFCSTVHHRTMSQFYSTQQVMTPVMVTNPTSCLAGSLAS
CRTGFSSHDSKYQQQNPTGVVYQRSKGGSPNHLGYQPTAVMVPSIPIIQDAHKSVLVHAG
SPVQSSMTHHSPTNQSSTIIHHSHNNHESSSMIHNSPTNHQASLIQHSPTHQQLSSMIHH
SPTSQQLRYSTQQDYQRQVYSESDAHVPIVRSTTPQHHVQKNSPNQYAAVIQQQQQTSNA
IQKVSKNGASPSQLPLILDQQEKETTVTGVTVKQEPQNLDQAYLDDETTWDFFQRLEHFN
KLMKL
NT seq
2898 nt
NT seq
+upstream
nt +downstream
nt
atgagcttcatttacaatgaaccagaccagcaggtcgattcagaagaatttgatttttct
gcactttttgataacagccatgatgaagactttgccacgagagaggcagaaaatgttcct
gcttctcacaaaggcattgttcatccttctggaattggttatccaaccattgatgtctcc
cactatggatctcagtcatgtagctcaatggcatctgcagtattaagtggagaacatatg
agtgaatacagtcaagcagaaaacagagatttcaaatgctacctagaagctgtaaaaccc
cctgtttcgtctggagtagaaagtccaagaattgagatcacaccatcccctggactgttc
catgtaactccacatgcagccagttgtggagagcaaacatatcattctcccactgtgatt
cccagagttactttacctgtgccaggctcagaaagtattgtatatagagacccactcagt
cctgccagtagtggttcatccacaagttggcattcctttgtgtctcacgagtcaagctgt
tcccattatggcatgtcccctcagacatctccattaacatccccatgtgtctcaccaaag
aatggctcagaagaatatcaaggccagggtgctcaccattctccacgaacatcacctgtc
aactcaccatcaactcacattgaaaactggcagggtgcaaggtcaccgtccccaactccc
cgaacttcttcaaggtcatcatcaccttgtgggaagaggaggtactcctgcgaccgctct
agaacgccttctcctcaagcttcaccaagagttattgcaattgaagaatccaatgtacac
caattttcaaattctgctagtctggccgacgccatgagtactctcaccaccgattccaac
catgacttaggcgaagtacttccaataaaggctcggatcatggatcttactccaccatcc
tcccttaaaactgacatgtgtaaagatgaaaaacttgctagctttgccacactgaatttt
gccgagctttcagggcagtgtcaggatgtgaagaaagacatctacagtattgatccattt
ttcctgatgccccctcatccattacatcggacaaaacccaaacctccctgcagcatccct
tctcttcctcctttggagtggcagctgctgagttcatcagacccatatgaattgaagatt
gagatacagcccaagcctcaccatcgggcacactatgaaacagaaggcagccggggcgca
gttaaagctcctaatggaggtcatccagtagtccagctccatggctacatggaaaataag
cctttaagcctgcacatatttattggaaccgcagatgagcggctactaagaccacatgcc
ttctatcaagtccaccgcatcactggcaagacagtctcaaccaccagctatgagaaaatc
tgtggaaatacaaaggttttagaaattccacttcttccagagaacaacatgaaagcagtg
attgactgtgctgggatactgaagctgcgaaatgctgacatcgagctgaggaaaggggag
acggacattggcaggaagaacaccagagtgaggcttgtatttcgagtacacattcctcaa
gtcagtggcaggacagtgtcactacaggttgcttcaaatcccattgaatgctctcagaga
tctgcacatgaattgccaatggtggaaaaacagagcacggacaattgtttcgttacaggt
ggacaacggatgattctcactggtcaaaactttacgactgagtcaaaggtcctttttaca
gagaagactcatgatggacagcagatatgggaggttgaggcaacagtggataaagataaa
agccaacctaacattctttttgttgaaattccacgctatcggaaccaacatatccgcaca
ccagctaaagtgaacttctgtgttgttaatggaaaaaggaaaaggagccaaccacagaga
tttacgtatctccctgcagtgcctataattaaaacagagccaacagatgagtgtgaagac
accatattctgcagcactgtacatcatagaaccatgtctcagttttattctacacaacaa
gtcatgacccctgtaatggtcactaatcccacttcctgccttgcaggaagcttggcttcc
tgtcgtactggattttcttcacatgattcaaagtatcagcagcagaatccaacaggagtt
gtctatcaaagatccaaaggtggcagtcctaatcatcttggctatcaaccaactgcagtg
atggtgccatccattcccataattcaagatgctcacaaatcagtattggtgcatgctggg
tcacctgtccagtcttctatgacacaccactctccaaccaatcagtcttccaccataatt
catcattcccacaacaatcatgagtcttcttccatgatccacaattctccaacaaatcat
caagcgtctctgatccaacactccccaacccatcagcagctatcttctatgattcaccat
tcaccaaccagccaacagttgagatacagcacccagcaggactaccaacgccaggtgtat
tcagagagtgatgcacatgtgcccattgtgcggtccactacaccacaacatcacgtgcaa
aaaaatagcccaaatcaatatgcagccgtgattcagcaacagcagcaaacatccaatgca
atccagaaggtctcaaaaaatggtgcttcaccatctcagctcccactgatactggatcaa
caggagaaggaaactacagttactggagtcacagtgaagcaagaaccgcagaaccttgac
caggcatatctggatgatgaaactacatgggacttcttccaaagactggaacactttaat
aagttaatgaaattataa
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