Chiloscyllium plagiosum (whitespotted bambooshark): 122560110
Help
Entry
122560110 CDS
T08871
Symbol
prex1
Name
(RefSeq) phosphatidylinositol 3,4,5-trisphosphate-dependent Rac exchanger 1 protein
KO
K12365
phosphatidylinositol-3,4,5-trisphosphate-dependent Rac exchanger 1 protein
Organism
cpla
Chiloscyllium plagiosum (whitespotted bambooshark)
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RhoGEF
DEP
SOS1_NGEF_PH
PDZ_6
PDZ
PH
PH_10
IQ_SEC7_PH
ECT2_PH
Motif
Other DBs
NCBI-GeneID:
122560110
NCBI-ProteinID:
XP_043566293
LinkDB
All DBs
Position
20:complement(27888947..28111479)
Genome browser
AA seq
1649 aa
AA seq
DB search
MDEESHPENGVESGKDTDRQLRLRVCVMNEILKTERDYVGSLKFLKSSFLHRNHQNDGDK
SEKQITEEHLKILFSNIEEILDVHKLFLAALEYHLQPEPQPQHELGNIFLQFKDRFCVYQ
EYCSNHEKALRLLMELNKIPEVRAMLLNCMVLGGMKTTDIPLEGYLLTPIQRICKYPLLL
KELLKRTPKKHSDNSAVEKALQAMKAVCTNINETKRQMEKLEALEHLQSSIEGWEGSNLT
DICTELLQQGPLLKISAGNIQERVFFLFDNLLVYCKRKSRVASKKSTKRTKSINGAQYIF
RGRINTEVMEVENVEDGTADYHSNGYTVTNGWKIHNTAKNKWFVLMAKTAEEKQKWLDAI
LKEREQRESLKLGMERDAYVMISEKGEKLYHMMMSKKGNLIKDRRRKLSVVPKCFFGNEF
VSWLMDIGEISKAEEGVNLGQALLENGIIHHVSDKHHFKNEMVLYRFRYDDGTYKPRSEM
EDIMSKGVRLYCRLHCLFTPVVKDRDHHLKTYKSVVPASKLIDWLLMQGDCQTREEAVTL
GVGLCNNGFMHHVLEKSEFKDESQFFRLYADEEMEGTSSKSKQLRNDFRLVENIVVKSLL
IFPEEDNYGFEIEEKNKVIVVKSVQSGSSAEVAGLQVGRKIYSINEDLVFLRPILEVETI
LNQLHCSRRPLRMLIATKPKEIIKVPDSLEGLSFQICGAAPPFVHAVLKGSGAAAAGLLP
GQCVLKVNGNNVSKENYTEVLEHFSAYRNNPQHLLNTRSSQWIYRTVEDVDEMMKTKVNT
NSVYSISDLSMNDKLLDVPANQTKPCDHITESKQETDLQPIIDGVTSHVNMTVDNVYLEH
GVIYEYVSTVGIKCHVKEKMVEPKGCFNLTAKILEALAADDRQFVKNCRGLISSRNSLIF
KPQLEFSHLCETKLDTIGQRISNYLKFAQELKNKAWPSFKQASTSLHPLNSTDFCPSNCH
INVIEVSCPKNTTSLGRSFSIRFGRKNSFLGLEQDQGTINPMNYTRHSITTMAAPQWKCL
IVEEGERDQQLDPEELVNQQNGEVSQESGGLSFLLKQEDLEIQDTFFQLFIKLENSLKEM
KQYVMQINVLLSSITEPAQSETSEHSSSDLTLPPSVLMEENDIDKAEHCGTKRVCFVVNE
EEQDDSGHDTTSYRDSYSECNSNRDSVLSYTSDRSRSSYLGSDEMGSGDELPCDIRIPLD
KQDKLHGCLEHLFNQVDSIDAFLKGSVMTKAFEETDGISTEYNIQEFRQKVDQNIRCRSI
IQTNVQEDPWNLPCSINALVDNVQEYVEDGKNQLLLALLHCTDLELQLRRDVLFCQSLVA
AICSFSEQLLAALNHRYNNNGEYEEESKEASKKWLEQIAVTGVLLNFQSLLSPSVKDERI
MLEDTKVALSDLDNVTFYFRQLEHEYPVANNSITYHIDGSRQALKVIFYLENHNFMELPS
KFQNGGSLKLHTVLFTQALENRCSSENASAEEFQQLINSASLEKVKCYYRKLRAFYLERS
NLPSDSSTTAVKINQLLRPLNALEELRRLMELYIGPKHSTSTVNSSNNASGIAVLPISSE
LCNRLGACQIVMCSTGIQRSTLSVTLEQAVILARSHGLLPRCIMQATDIMRKQGARVENS
AKNLKVMDQMPQLVPRLYRLCQPPSDGDI
NT seq
4950 nt
NT seq
+upstream
nt +downstream
nt
atggatgaagaaagtcaccccgaaaatggagtggagagtggaaaggacacagatcggcag
ctccgtttacgagtttgtgtgatgaatgagattttaaaaacggagagagactacgtgggt
tccttgaaatttctgaaatcttcattcctgcacagaaatcaccagaatgatggcgacaaa
tcagaaaagcaaattactgaagaacatctcaagattttgttttctaacattgaagagata
cttgatgtgcataagttgttcttggcagctcttgagtaccatttacaaccagaaccacaa
cctcaacatgaacttggaaatatcttccttcagtttaaagaccgattttgtgtctatcaa
gaatattgtagcaatcacgaaaaagccttgagacttttaatggaattgaacaaaatacct
gaagtgcgggcaatgcttttgaactgcatggttctgggaggaatgaagaccacagatata
ccactggaaggctatttgttaaccccaatacagagaatctgcaaatatcctttattactt
aaagagttgctaaaacggacccccaaaaagcacagtgataactctgcagtggaaaaagcc
ttgcaagcaatgaaagccgtgtgcactaacattaatgaaaccaagaggcaaatggagaaa
ctggaagctttggaacatctgcagtcatcaattgaaggatgggagggttcaaatttgaca
gatatatgcactgagctgcttcagcaaggacctttattaaagatctcagctggaaatatt
caggagcgagtgttctttttgtttgataacttgctggtatactgcaaaagaaagtcaagg
gtggctagtaagaagtcaaccaagcgcaccaaatctataaatggtgcccaatacattttc
cgtggaagaatcaacaccgaggtaatggaagtggagaacgttgaagatggaacagctgat
taccatagcaatggctatactgtgacaaatggttggaagatccacaacacggctaaaaat
aagtggtttgtcttaatggccaaaactgctgaagaaaaacagaaatggttggatgcaatt
ctaaaggagcgagaacagagggagagtctgaagttgggcatggagcgtgatgcatatgtc
atgatctctgagaagggagagaagctctatcacatgatgatgagcaagaaaggaaacctc
ataaaggaccggaggagaaaactgtctgttgtcccaaagtgcttttttggcaatgagttt
gtttcctggctgatggacataggagagatcagtaaagctgaggaaggcgtgaatctgggt
caagccttgcttgagaatggcatcattcatcatgtttccgacaaacaccatttcaaaaat
gagatggtactctacaggtttcggtatgacgatggaacctataaacctcgaagtgagatg
gaagatatcatgtcgaagggtgtaaggttgtactgtcgattacattgcctcttcactcct
gtggtcaaagaccgagatcatcacctgaaaacctacaagtctgtggtgccagcaagcaag
ttgatcgattggctgctaatgcagggcgactgccagaccagagaggaagcggtcacactt
ggcgtgggactgtgtaataatggcttcatgcatcatgtgctagagaaaagtgaattcaag
gatgagtcccaattttttcgcctttatgctgatgaagaaatggaagggaccagctccaaa
agcaaacagttgcggaatgacttcagattggttgaaaacattgttgttaaatcccttttg
attttccccgaagaagacaattatggattcgaaattgaagagaaaaataaggtcattgtg
gtgaaatctgtacaaagtggttcttctgctgaggtggcaggccttcaggttgggaggaag
atttactccatcaatgaagatttggtttttcttcggccaattttggaagtggagaccatt
ttaaatcagttgcactgcagtcggcgaccactgaggatgctgattgcaacaaaacccaaa
gaaataatcaaagttcctgactctttggaaggactaagctttcagatatgtggagctgcc
ccaccatttgttcatgcagttctaaaagggtctggggctgcagcagcgggacttcttcct
ggccagtgtgttctaaaagtaaacgggaacaacgttagcaaagaaaactacactgaagta
cttgaacacttcagtgcatatagaaataatccacagcatttgctgaatacacgttcaagt
cagtggatatataggactgttgaagatgttgatgagatgatgaaaacaaaagtcaacaca
aatagtgtttacagtatttccgatctgtcaatgaatgacaaattgttagatgttccagcc
aatcaaacaaagccatgtgatcatatcactgagagcaagcaggagactgatctgcagccg
atcattgatggggtgacctctcatgtcaacatgactgtcgataatgtgtatttagagcac
ggtgttatctatgagtatgtcagtacagttgggataaaatgtcacgtcaaggaaaaaatg
gtggagcctaagggatgcttcaatttaactgcaaagattttggaagctttagcagcagat
gaccgtcagtttgtaaagaactgcagaggactgatatcgtctagaaattctctcatcttt
aagcctcaattggaattcagccatctatgtgagaccaagcttgataccattggccagaga
atttccaattatttgaagtttgcccaagagttgaaaaataaagcatggccctccttcaag
caagcttcaaccagtttacacccattaaacagcacggacttctgtccaagcaactgtcat
attaatgtcattgaagtatcctgtccaaaaaatactacctctctgggaagatctttcagt
atacgctttggtcgaaaaaattctttcctcggcctggagcaagatcaaggaactataaat
cctatgaactacactcggcacagcatcaccactatggcagcaccccaatggaagtgttta
atagttgaggagggagaaagagaccaacagctagatccagaggagttggtaaatcagcag
aatggagaagtgtctcaagaaagtggaggcctgagttttctattaaagcaggaagacctg
gagattcaagacactttcttccagctttttattaaactggagaattctttaaaagaaatg
aagcaatatgtaatgcaaataaatgtcctgctgtcctcaataactgagcctgcccagtct
gagacttcagagcacagttcatcagacctcacacttcccccatccgttctgatggaagaa
aatgatattgacaaagctgaacactgtggaacaaagagagtctgctttgtggtgaatgag
gaagagcaggatgactctggacacgatacaacaagttatagggattcctacagtgaatgt
aacagcaaccgagactctgttctatcctatacaagtgatcgcagcaggagctcttatctg
ggcagtgatgaaatgggatcaggtgatgaactgccttgtgacataagaattcctctcgac
aaacaggacaaattacatggttgcctcgagcacctttttaatcaggtggattccattgat
gcattccttaaggggtcagttatgaccaaggcttttgaagagacagatggcattagtaca
gaatacaacatacaagaatttcgacagaaagttgaccaaaacataagatgtcgaagtata
atccaaacaaatgtgcaggaagacccctggaatttgccttgttcgatcaatgccttagtg
gacaacgtacaggaatacgtagaagatggaaaaaatcaattgcttttagctctcctccat
tgcacagatctggagttacaattacgccgcgatgtcctcttttgtcaaagcctagtagca
gccatctgtagcttttcagagcagttgttggctgctttgaaccaccggtataataacaat
ggcgaatatgaagaggagagcaaggaagccagcaaaaagtggcttgagcagatagctgtt
actggggtccttctcaattttcagtctctgctctctccaagtgtgaaagatgagcgcatc
atgctggaagacaccaaggtcgccttgtctgatctggataatgtaacattctattttaga
cagctggaacatgaatacccagtagcaaacaactctatcacttaccatatagatggaagt
cgccaagcgttgaaagttatcttttatcttgaaaatcataactttatggagttgccttct
aagtttcagaatgggggaagtttaaagctacacacagtgctcttcactcaagctcttgag
aacagatgttcttcagaaaatgcatcggcagaagaattccaacaactgatcaattcggct
tctcttgaaaaagttaaatgttattatcgaaaactcagggctttctatctagaacggtct
aatttaccttctgattcttcgactacagctgtaaagataaaccagctgttacgtcctctc
aatgcactggaggaacttcggcggttgatggagttgtacataggcccaaaacattcaaca
tccacagtgaactcaagcaataatgcttccgggattgcagtcttgccgatatcttctgag
ctttgcaacaggcttggagcttgtcagattgttatgtgcagcactggtatacaaaggagt
actttaagtgtgaccctggagcaagcagttattttggctcgtagtcatggactcttacct
agatgtatcatgcaggcaacagacattatgagaaaacagggtgcaagggttgagaattca
gccaaaaatttgaaagtaatggatcagatgccacaacttgtaccaaggttataccggctc
tgtcaaccaccttccgatggagacatatga
DBGET
integrated database retrieval system
