Chiloscyllium plagiosum (whitespotted bambooshark): 122560125
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Entry
122560125 CDS
T08871
Symbol
pja2
Name
(RefSeq) E3 ubiquitin-protein ligase Praja-2 isoform X1
KO
K10634
E3 ubiquitin-protein ligase Praja2 [EC:
2.3.2.27
]
Organism
cpla
Chiloscyllium plagiosum (whitespotted bambooshark)
Brite
KEGG Orthology (KO) [BR:
cpla00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cpla04121
]
122560125 (pja2)
Enzymes [BR:
cpla01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
122560125 (pja2)
Ubiquitin system [BR:
cpla04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
122560125 (pja2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
zf-C3HC4
zf-rbx1
zf-C3HC4_2
zf-RING_11
zf-RING_UBOX
zf-RING_5
zf-ANAPC11
zf-C3HC4_3
Motif
Other DBs
NCBI-GeneID:
122560125
NCBI-ProteinID:
XP_043566333
LinkDB
All DBs
Position
2:complement(60325120..60429690)
Genome browser
AA seq
697 aa
AA seq
DB search
MGQESGKSAWPRPAGGYQTITGRRYGRRHAYISFRPSISKSWNHLKENEHQWEEMELNTV
SKDNGLSPSRILTTKELLPQCTACDLTMDAKSNAGCELQKENRFLPSSLNQRLFQCESND
FALPSSAEPLDNYSGSQSTGSSKWSIPNDFFETDSRRPTGIGFVNIDSYEPESSEGEDED
SNIQASLQKEGKLQKRLDTMLSELEKGVDYLNGLQSYLSAVMHEGNSSQIELPCSLALDN
LTSADIAVKGHQTELKEHRKTLPAVGSMEEINTYVKMEDVKEKRERNLDKASLSVQTEGN
IFCCMTEEPSSSEMVVRPKVRKERVETHSKRDQPSPDEFYSYCTGDMKANSRNECCGSNC
ALWNCRNKLHRDSKIGSGLNGKETTYVQKEQAAIQLKETLEENSFWDDFENYCNKGETSS
SLSSDEEWSAIWTSDFVLEQMHSSDESWETLSGVDEQQTEPNSISSSLDEEAFKHSYTVG
EQTSLEEGEIPWVAFNEESDSSSNSTDETEGLGQLAHSGLLILDDNNNFEDDSSVSEDLD
MEWRLLDELGEGLTAQAISSVDPQLLTFMALEERLAQAMEAALAHLESLAIDGEQAPPPA
PKETIECLPQLSISEGHNGLEQSCAICCSEYVKEELVTELPCHHLFHRPCVTLWLQKSGT
CPVCRHILTSTLPETATTAFLSEPEIPPSTRDGPAIR
NT seq
2094 nt
NT seq
+upstream
nt +downstream
nt
atgggtcaagagtctggaaagtcagcctggcccagaccagcaggaggttatcagactatc
actggaagaagatatgggagaaggcatgcttatattagctttcgcccttctatttccaag
tcatggaaccacttaaaagaaaatgagcaccaatgggaagaaatggagctaaacactgtt
tcaaaagataacggtttatctcccagtagaatcttaacaacaaaagaacttctgccgcag
tgcacagcatgtgacctaactatggatgctaaaagcaatgcaggttgtgaacttcagaaa
gagaataggtttttgccatcctctctgaaccaaagactttttcaatgtgagtccaacgac
tttgctttgcccagttctgcagagccattagacaattattcgggtagccaaagtacaggg
tcctccaagtggtcaattcctaatgatttttttgagactgattccagacgtccaactggc
attggttttgtaaatattgattcttatgaaccagaaagcagtgaaggagaggatgaagat
tcgaacattcaagcatctttgcaaaaagaaggaaaacttcagaaaaggttggataccatg
ctttcagaattagagaaaggtgttgactatcttaatgggctacagtcttatctctcagct
gtaatgcatgaagggaacagctcacagattgagctgccatgctctttggcactggacaat
ttgacttctgcagatattgctgttaaaggacatcaaacagaattgaaagagcataggaaa
acattaccagctgtgggaagtatggaagaaattaatacctatgtcaagatggaggatgta
aaagaaaaaagagaaagaaatcttgataaagcctcactgagcgttcaaacagaagggaac
attttttgttgtatgacagaggaaccaagctcttcagaaatggtagtaagaccaaaagtt
agaaaggaaagagttgaaacccattctaaaagagatcagccttcccccgacgagttttat
agttattgtactggggatatgaaagctaactcaagaaatgagtgctgtggatcaaattgt
gccttgtggaactgcagaaataagctccatagagattcaaagatcggatctggacttaat
ggcaaggaaacaacttatgttcagaaggaacaggccgccatccaactaaaagaaacactg
gaagaaaacagcttctgggatgactttgaaaattattgtaacaaaggtgaaacgagcagc
tctctaagcagtgatgaggagtggtcagcaatatggacctctgattttgttttagaacaa
atgcattctagtgatgagagctgggagaccttgtcaggagttgatgaacaacaaactgaa
ccgaacagcattagtagcagtctggatgaggaagcttttaaacatagctacactgtaggg
gaacaaacctctttggaagaaggagagatcccctgggtagcatttaatgaagaaagtgac
agcagcagcaatagtactgatgagactgaaggcttgggtcaacttgcacattcgggactt
ctaatcctggatgataacaacaactttgaagatgattcgagtgtaagtgaagatttggac
atggaatggagattgcttgacgaactcggtgaaggacttacagctcaagctatttcgtct
gttgatccacaacttcttacctttatggctctggaagagcgcttggctcaagcaatggag
gctgctctagcacaccttgagtctctggccatagatggtgagcaagctccccctccagct
cccaaggaaacaattgaatgcttaccacaactttcaatttctgaggggcataacggcctg
gagcaatcctgtgccatctgttgcagcgaatatgtgaaggaggagttggtgacggagtta
ccatgtcatcatctatttcataggccatgtgtaaccctctggctacagaagtctgggact
tgtccagtatgtcgtcacattcttacatcaacacttcctgaaactgctaccactgcattt
ttatcagaaccagagatccctccttctacccgtgatggtcctgcaatacgataa
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integrated database retrieval system
