Chiloscyllium plagiosum (whitespotted bambooshark): 122560187
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Entry
122560187 CDS
T08871
Name
(RefSeq) serine/arginine-rich splicing factor 6-like
KO
K12893
serine/arginine-rich splicing factor 4/5/6
Organism
cpla
Chiloscyllium plagiosum (whitespotted bambooshark)
Pathway
cpla03040
Spliceosome
cpla05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
cpla00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
122560187
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
122560187
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cpla03041
]
122560187
Spliceosome [BR:
cpla03041
]
Common components
Common spliceosomal components
SR proteins
122560187
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Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_3
RRM_5
Motif
Other DBs
NCBI-GeneID:
122560187
NCBI-ProteinID:
XP_043566508
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All DBs
Position
20:complement(38883094..38893918)
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AA seq
352 aa
AA seq
DB search
MPRVYVGRLSYQVREKDLERFFRGYGKLLEVDLKNGYGFVEFEDARDADDAVYELNGKEL
CGERIIVEHARGPRRDGSYGGGYGGGGGRSSGGYGYRRNGREKYGPPVRTEFRLIVENLS
SRCSWQDLKDFMRQAGEVTYADAHKQRMNEGVIEFRSYSDMKRALDKLDGTEINARKIRL
VEDRPRNRRSSSGSRSRSRSRSHRHSRSRSRRTSRSRSGSASKSRSRSRSQSKDHSRSKS
KSPERKSRSRGNSKVMSDKGSRSRSPSKSKSELNNKSHSRSKSPQVNGKGDAKSMSRSRS
KSRSRSREAPLLASPVNSKPRSANASPSNTRSRSASRSRSRSISRSRSGSKD
NT seq
1059 nt
NT seq
+upstream
nt +downstream
nt
atgccgcgtgtgtacgtcgggaggctcagttaccaagttcgggagaaggacctggagagg
ttcttcaggggttacggcaaactgctggaggtggacctgaagaacgggtatgggtttgtt
gagtttgaagatgcacgtgatgcagacgatgcggtctatgaactgaatgggaaagaactt
tgtggcgagcgcataattgtggaacatgcaagaggaccacgtcgtgatggaagttatggc
ggtggttatggtggtggtggaggtcgcagcagtggtggttacggatatcgaagaaatgga
agggagaaatatgggccacctgtccgtacagagttcagactgatcgtcgaaaatctttca
agccgttgcagctggcaagacctaaaagatttcatgagacaagcaggagaagtgacctat
gcagatgctcataagcagcgtatgaatgaaggagtcattgaattcagatcatactctgat
atgaaacgagctttggacaagctggatggcactgaaatcaatgcaagaaagattcgattg
gttgaagaccgcccccgtaatcgacgctcctcttctggtagtcgatcgcggtccagatcc
cgaagccatcgtcattcacgtagcagaagtcgtaggaccagtcgaagtcggtctggcagt
gcttcaaagagcaggtcacgttctcgatctcagagcaaggaccattccaggtccaaatca
aagtctccagaaaggaaatctagatcaagaggtaattccaaagtcatgtctgacaagggc
tctcgttctcgatcaccaagcaaatcaaaatctgaattgaataataagtcacacagcaga
tccaaatcccctcaagtaaatggtaaaggagatgctaaatcaatgtctcgttcacgttca
aagtcccgctcaagatcaagagaagcaccacttcttgcatcaccagttaattcaaagcca
agatcagcgaatgcatctccatccaacactcgttctagatcagcatctaggtcccgatct
agatcgatatctaggtctagatctggctctaaggattag
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