Chiloscyllium plagiosum (whitespotted bambooshark): 122560198
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Entry
122560198 CDS
T08871
Symbol
rpn2
Name
(RefSeq) dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 2 isoform X1
KO
K12667
dolichyl-diphosphooligosaccharide---protein glycosyltransferase subunit 2 (ribophorin II)
Organism
cpla
Chiloscyllium plagiosum (whitespotted bambooshark)
Pathway
cpla00510
N-Glycan biosynthesis
cpla00513
Various types of N-glycan biosynthesis
cpla01100
Metabolic pathways
cpla04141
Protein processing in endoplasmic reticulum
Module
cpla_M00072
N-glycosylation by oligosaccharyltransferase
Brite
KEGG Orthology (KO) [BR:
cpla00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00510 N-Glycan biosynthesis
122560198 (rpn2)
00513 Various types of N-glycan biosynthesis
122560198 (rpn2)
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
122560198 (rpn2)
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Motif
Pfam:
Ribophorin_II
Ribophorin_II_3rd
Ribophorin_II_C
Ribophorin_II_2nd
EcpD_mid
Motif
Other DBs
NCBI-GeneID:
122560198
NCBI-ProteinID:
XP_043566533
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Position
20:41164368..41217871
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AA seq
642 aa
AA seq
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MGAAGTGTLFTLALLAIAQAVTVKHYLSDSDIERLAQTLKQPYSNLENAYYTIVGLQKLG
DQVPDEQVACNFLKSQVDSRNVDSLFYAAEASQALSNCEIKVSNETRDLLLAAVSDDSSV
TQIYHAVGALSNLALPVASRDVLAALSAHLSKDDGSLGIIHALFAASYLSQQADLRSILE
EIEDLVARLDDLGGIYLQFEEGLETTALFVSAAYKLSDHAGMEPAIKEDQVIQLVNAIFS
KKHFTTLSEAFSIACAAAALSHNQYHIPVIVVAEGIASVSHKKPNLKLHVTNILSETLTS
ADVQVESAKSTMAKNTVLQQTSFALKGDIFELNFMEVKPPSGYYDFSLSVEGDSRFMGNH
VEIKVKVATEVDITNVDLSVVDRDQSISPKTTRVTYPSKAKGLVAADSHQSFALSFQLVD
VNTGTELTPHQTFVRLYNQKTDQEVVFVAEPDSKKVYKFDLDVAERKSEFNSVSGTYSLF
LIIGDATIENPILWHLADVAIKFPDEEVPTPVQTQNVFAPKPEIQHLFREPEKKPPIAVS
NTFTALVLAPLLLLIILWIKLGVNISNFTFSPSTIIFHLGHAGMLGLMYVYWTQLNMFQT
LQYLAILGSITFFAGNRMLAQKAVKRIAAEQSSRLAKYRTLR
NT seq
1929 nt
NT seq
+upstream
nt +downstream
nt
atgggagcagcaggtacagggactctgtttaccttggctttgttagccattgcacaggcc
gtcactgttaagcactatttgtcagattctgatattgaaagattagcacaaactttaaaa
cagccttattctaatttggagaatgcctattacaccatagttggtttgcaaaagcttggg
gatcaagtaccagatgaacaggtcgcttgcaactttttgaaatcgcaagtagactccaga
aatgttgactcccttttctacgctgctgaagcgagtcaagccctctcgaattgtgaaatt
aaagtcagcaatgaaactcgagatcttttgttggcagctgtgagcgatgattcttcagtt
acccagatttaccatgcagttggagctttgagtaatcttgctcttcctgtggcatctcgg
gatgttcttgcagctctttctgctcacctatctaaagatgatggatctttgggaattatc
catgcattgtttgctgcttcttacctatctcagcaggctgatctaaggagcattctggaa
gagattgaggatctggttgcacgtcttgatgatttgggaggtatttatcttcaattcgaa
gaaggattagaaacaactgctttgtttgtgagtgcagcatataaactttctgaccatgct
ggaatggagccagcaatcaaagaggatcaagtcattcagcttgtcaatgctatattcagt
aagaaacattttaccacattgtccgaggctttcagcattgcctgtgctgcagcggctttg
tcccataatcagtaccatattccagtcattgtcgtagctgaaggaattgcttctgtttcg
cacaagaagcccaacctaaagttgcatgtgacaaatattttgtctgagactctgacttca
gctgatgttcaggttgaaagtgccaagtctacaatggcaaaaaacacagttcttcaacaa
acatcctttgctttgaaaggtgatatctttgaattgaattttatggaagtaaagccacca
agtggatattatgacttttctctcagtgtggagggtgatagccgttttatgggaaaccat
gtggagatcaaagtcaaggttgccactgaagtcgatatcactaatgttgacctctcagta
gttgacagggatcaaagcatttcaccaaagaccaccagggtgacttatccttcaaaagcc
aaggggcttgttgctgctgacagtcaccagagctttgcattatcattccagttggtagac
gtgaatactggaactgagcttactccacatcaaacttttgtacgtctctacaatcagaag
actgatcaggaggtcgtttttgtggcagaaccagacagtaaaaaagtgtacaaatttgac
ctagatgtggctgaaagaaaatctgaatttaactcagtttctggaacctattccctcttt
ttgatcattggagatgcaacaattgaaaacccaattctctggcacctggctgatgttgct
attaagtttcctgatgaagaggttccaactcctgtgcaaactcagaatgtctttgcccct
aagcctgaaattcagcacctgtttcgggagcctgaaaagaagccacccattgcagtctca
aatactttcactgcccttgttctagcacctctcttactgcttataattctgtggatcaaa
cttggtgtcaatatctctaatttcaccttttctccgagcaccatcatcttccatttgggc
catgctggaatgttgggactcatgtatgtatactggactcaactgaacatgtttcagact
ctgcagtatcttgctatacttggcagcatcacattctttgctgggaacagaatgttagct
cagaaggcagtaaagaggattgcagcagaacaaagcagtagattggcaaaatataggact
cttcggtaa
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