Chiloscyllium plagiosum (whitespotted bambooshark): 122560216
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Entry
122560216 CDS
T08871
Name
(RefSeq) calcium-responsive transactivator-like isoform X1
KO
K15623
protein SSXT
Organism
cpla
Chiloscyllium plagiosum (whitespotted bambooshark)
Pathway
cpla03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
cpla00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
122560216
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
cpla03036
]
122560216
Chromosome and associated proteins [BR:
cpla03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
122560216
GBAF(ncBAF) complex
122560216
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SSXT
Motif
Other DBs
NCBI-GeneID:
122560216
NCBI-ProteinID:
XP_043566575
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All DBs
Position
20:complement(43951940..44071259)
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AA seq
446 aa
AA seq
DB search
MSVAFASARQRGKGEVTQATIQKMLDENNHLIQCIMDYQSKGKTAECSQYQQMLHRNLVY
LATIADSNQNMQSLLPAPPSQNLTMGPGGMNLSGSNQALHSQNVPSDTMGGGIPPSPLMQ
SQMSNGPSHVSVQQSGPAAIPSSSMTMPVNNHGSAGAYSHSVPSSQSMQMQSQGQSMANY
GSRTNMSMQTGQVPMMHQQAATSHYSTPQGSGQHYQGPSAMGMMGQSNQGNNIMGQRPMG
PYRSSQQGSSQQYIGQEDYYGEQYGHGQGPTDSINQQYYPDGHGEYAYQQSSYAEQGYER
SFEESSQHYYEGGNSQYTQQQTAYQQGPTQQQTYSQQQYPTQQSYPGQQQGYGPSQGAAS
QYPGYQQGQGQQYGSYRTAQPGPSAQQQRPYGYEQCNNPAEVLDVSVGLQINTASTMTSN
QKRASGTALEVLHTGTVRKLPAIGNS
NT seq
1341 nt
NT seq
+upstream
nt +downstream
nt
atgtctgtggcatttgcatcagctcgccagcgggggaaaggggaggtcacccaagccacc
attcaaaagatgttggatgaaaacaatcatttgatacaatgtatcatggattaccagagt
aaaggcaaaactgcagaatgttctcaataccaacaaatgctgcacagaaatttggtttac
ctggcaacaatagcagattccaaccaaaatatgcagtcgttgctacctgctccaccttcc
caaaacctgacaatgggacctggaggaatgaatctttctggatcaaatcaagctttacac
tcacagaatgttcccagtgacaccatgggaggaggtatacccccttctccattaatgcag
agccagatgagcaatggtccgtctcatgtttcagtgcagcagtcagggccagcagcaata
ccgagctcttcaatgaccatgcctgtaaataaccatggaagtgcaggcgcttatagtcac
tctgtcccctcatcacaaagcatgcagatgcagagtcagggccagtcaatggcaaactat
ggatctcggacaaacatgagcatgcaaactggtcaagttcccatgatgcaccagcaagcc
gcgacctcacattacagtaccccgcaaggaagtggtcaacattaccaagggccatcagcc
atggggatgatgggacaaagtaaccaaggcaacaacataatggggcaaaggccaatgggg
ccatataggtcatcacaacaaggttcttctcagcaatacattggacaggaagattactat
ggtgagcaatatggacatggccaaggacccacagattccattaatcaacaatattaccct
gatggccatggtgaatatgcatatcagcaatcatcatatgcagaacaaggttatgagagg
tcgtttgaggaatcctcacagcattactatgaaggaggaaattcccagtatacccaacag
cagacagcttaccagcagggaccaacccagcagcaaacttactcccaacagcaatacccc
acccagcagagctacccaggccaacaacaaggatatggtccatcccagggagctgcttct
cagtatccaggttaccaacagggacagggacagcaatatggaagctacagaactgctcaa
ccagggccctcagctcagcaacagaggccttatggatatgaacagtgcaacaatccagct
gaggtgctagacgtgagtgtgggactgcaaatcaacactgccagcaccatgacttcaaat
cagaaacgggcctctggcacagctttggaggtactgcatacaggcacagtacggaaacta
ccagcaataggaaacagttga
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