Chiloscyllium plagiosum (whitespotted bambooshark): 122560243
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Entry
122560243 CDS
T08871
Symbol
dhx35
Name
(RefSeq) probable ATP-dependent RNA helicase DHX35
KO
K13117
ATP-dependent RNA helicase DDX35 [EC:
5.6.2.6
]
Organism
cpla
Chiloscyllium plagiosum (whitespotted bambooshark)
Brite
KEGG Orthology (KO) [BR:
cpla00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cpla03041
]
122560243 (dhx35)
Enzymes [BR:
cpla01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
122560243 (dhx35)
Spliceosome [BR:
cpla03041
]
Complex C
Other components
Complex C specific factors
122560243 (dhx35)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OB_NTP_bind
HA2_C
Helicase_C
HA2_N
AAA_22
ABC_tran
DEAD
Cas3-like_C_2
AAA_19
AAA_7
nSTAND3
AAA_30
AAA_23
Motif
Other DBs
NCBI-GeneID:
122560243
NCBI-ProteinID:
XP_043566662
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All DBs
Position
20:complement(48487294..48554901)
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AA seq
701 aa
AA seq
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MAAPMLVPKFWKPGTEGPGVGLSEERVSSAESSDTAVIYNRYASLSIEQQRQKLPIFKHR
NHILYLVENYQTVVIVGETGCGKSTQIPQYLLEAGWTAEGRVIGVTQPRRVAAVSVAGRV
AEERGAALGHEVGYSIRFDDCTDFYATRIKFLTDGMLVREMMADPLLKKYSVLLLDEAHE
RTLYTDIAIGLLRKIQKKRGDLRLIVSSATLDAEKFRNFFNMNETKDPSKDTCAILTVEG
RTFPVDIFYTLSPVPDYVKATVDTVTKIHQNEGDGDILAFLTGQEEVEMVVSMVIEQARA
LSRSGMKKHLRVLPMYAGLPPGEQMKVFERMSPNCRKIVVATNIAETSITINGIVFVIDC
GFVKLRAYNPRTGIESLVVTPVSQASAAQRAGRAGRNRSGKCFRLCTEETFEKLPESTVP
EMQRSNLAPVVLQLKALGIDNVLRFHFLSPPPAQSMVQALELLYALGGLNDQCFLTDPLG
LHMAEFPLNPMFAKMLLESGNFGCSQEILSIAAMMQIQNVFVVPPNQKSAAAREHRKFAV
AEGDHLTMLNIYEAFVKHNKNSQWCQKHFLNYKGLIRATTVREQLKKLLSKFRVPKKSSE
GDPDPILRCIVSGFFANAAKFHYSGFYRTIRDDYELHIHPTSVLYGEKEPQWVVYNEIIQ
TSKYFMRDVTAIQSSWLLELAPHFYRRRTSISQRVKKARVT
NT seq
2106 nt
NT seq
+upstream
nt +downstream
nt
atggcggcccccatgttagtgccgaagttttggaaaccaggtaccgagggacctggtgtg
ggtttatctgaggagcgagtgagttctgcagaatcaagtgacactgcagtgatttacaat
cgatatgcatccctctctatagaacaacagaggcaaaagcttcctatctttaagcacagg
aatcacatcctttatttggtagaaaactatcagaccgtggtgatagttggtgaaaccgga
tgtggaaagagtactcagattccacagtacctgttggaagctggctggacagcagaaggc
cgggtgatcggtgtgacgcagccccggagagtggccgcagtttcagtggcaggacgagtg
gcagaggaacgtggcgcagccttgggtcatgaagttggctactctatccgttttgatgac
tgtactgatttctatgcaacaagaatcaagtttcttacagatggaatgcttgttcgggaa
atgatggctgatcctttattgaagaaatacagcgttctactgttggatgaagcccatgag
cgaaccttgtacacagacatagctattggcttattaagaaagattcagaagaaaagaggc
gatcttcgacttattgtgtcctctgctacactagatgcagagaaatttcggaactttttc
aatatgaatgagaccaaggaccccagtaaggacacatgtgccatcctgactgtggaggga
cggacatttccagttgacatattttatactttaagtccagttcctgattatgtgaaagct
acagtggacacggtcacgaaaatccaccagaatgagggtgatggggatatcctagcattt
ctcactggccaggaggaagtggagatggtggtttccatggtgatagagcaggcccgtgct
ctttctcgcagcgggatgaaaaagcacctccgtgttcttccaatgtatgcagggctgcct
cctggcgaacagatgaaagtctttgaaagaatgtcccctaactgcaggaagatagtggtg
gccacaaacattgcagaaacctcaatcactattaatggtattgtttttgtcattgactgt
ggctttgtgaagctgagagcctacaatcccagaacaggtattgaatctctcgtggtaact
ccagtctcccaggcatctgcagctcagcgagcaggacgagcggggcgaaatcgctcagga
aagtgcttcaggctatgcacagaggaaacttttgagaagttgcctgaatccacagtgcca
gagatgcagcgcagcaaccttgctccagtcgtactccagctaaaagcactgggcattgac
aatgtgctgagattccattttctgtctcctccaccggcccagtcaatggtccaggcattg
gaactcctttatgcactaggaggtttgaacgatcagtgcttccttactgaccctctcggc
ctccacatggctgaatttccattgaatcccatgtttgctaaaatgctgctggaatcagga
aactttgggtgctcccaggagattttgagtatagcggccatgatgcagatacagaatgtg
tttgtggtacccccaaaccagaaaagtgcagcggcaagagagcaccggaagtttgctgtg
gctgagggagatcacctcacaatgctgaacatctatgaggcctttgttaagcacaataaa
aactctcagtggtgccagaagcatttcttaaactacaaaggacttattagagccacaaca
gtacgtgaacaactgaaaaagttattgtccaaattcagagtgccgaagaagtcaagtgaa
ggtgacccggatcctattctgcgatgtattgtttcaggcttctttgcgaatgctgcaaag
tttcattactctggattctacaggaccattcgagatgattatgaacttcatattcatcca
acctctgtgttatatggagagaaggaaccacaatgggttgtgtataacgagatcatccag
acatccaagtactttatgagagatgtgactgcaatccagtcttcatggttgttagagtta
gccccacacttctatcgaagaagaacttccatttctcagagagtaaagaaagctcgagtt
acctga
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