Chiloscyllium plagiosum (whitespotted bambooshark): 122560287
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Entry
122560287 CDS
T08871
Name
(RefSeq) RNA-binding protein 39
KO
K13091
RNA-binding protein 23/39
Organism
cpla
Chiloscyllium plagiosum (whitespotted bambooshark)
Brite
KEGG Orthology (KO) [BR:
cpla00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cpla03041
]
122560287
Spliceosome [BR:
cpla03041
]
Common components
Common spliceosomal components
General mRNP proteins
122560287
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
RRM_1
RBM39linker
RRM_occluded
RRM_5
RBD_DEAH11
RRM_7
Motif
Other DBs
NCBI-GeneID:
122560287
NCBI-ProteinID:
XP_043566772
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All DBs
Position
20:complement(53161875..53195814)
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AA seq
414 aa
AA seq
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MQPGIKISRRRSRSRSPHKKDKSPIREPIDNISPEERDARTVFCMQLAARIRPRDLEEFF
SSVGKVRDVRMISDRNSRRSKGIAYVEFVDVSSVPLAIGLTGQKLLGVPIIVQASQAEKN
RAAALANNLQKGTAGPMRLYVGSLHFNITEEMLRGIFEPFGRIENIQLMMDSETGRSKGY
GFITFSDAECAKKALEQLNGFELAGRPMKVGHVTERSDSSNASSFLDSDELERTGIDLGT
TGRLQLMARLAEGTGLQIPPAAQQALQMSGNISLGAMAAVTDLQARIIQQTEALNPPVTV
NTPPIATQCFQLSNMFNPQSEDDPAWDQEIRDDVIEECNKHGGVIHIFVDKNSPQGNVYV
KCPTIAAAAAAVGALHGRWFAGKMITAAYVPLPTYHNLFPDSLTTTQLLTPARR
NT seq
1245 nt
NT seq
+upstream
nt +downstream
nt
atgcaacccggtatcaaaataagtcgaaggcgctcccgaagcagaagcccacataaaaag
gataaaagtccaataagggagccaatcgataatatttctcctgaagaaagagatgcccga
actgtgttctgtatgcaacttgcagcacgaattcgaccgagagatttggaagaattcttt
tcatctgtgggaaaggttcgagacgtcagaatgatatcagataggaactcaaggcgttca
aaaggaattgcttatgtggaatttgttgatgtgagctctgttccactcgccataggctta
actgggcagaagctgcttggtgtgccaattattgttcaggcttcacaggctgagaagaac
cgagcagcagctcttgctaacaacctacagaaaggcacagctggaccaatgaggctatat
gtaggatcgttgcacttcaatattactgaagaaatgttgagaggaatttttgagcccttt
gggagaattgaaaacatccaactgatgatggatagtgaaaccgggcggtcaaaaggttat
ggattcataacattttctgatgctgagtgtgcaaagaaggctttggaacagttgaatggc
tttgagcttgctggtagaccaatgaaggttggtcatgttacagagcgatcagattcatcc
aatgcaagctcgttcttggacagcgatgaactggagaggactggcattgaccttggaacg
acaggacgcctacagttgatggctaggcttgcagaaggaacagggttgcaaattccccca
gcagcacagcaagcattgcagatgagtggcaatatttcattgggtgccatggcagcagta
acggacttgcaagcaagaattatccaacagactgaagcactgaatcctcctgtgactgta
aataccccaccaatagcgacgcagtgttttcagctctccaacatgtttaacccacagtcg
gaagatgatccagcctgggaccaagaaattcgtgatgatgtgattgaagaatgtaacaaa
catggaggtgtaattcacatatttgtggacaaaaattcgccccagggaaatgtctatgtg
aaatgtccgactattgctgctgcagctgctgctgttggtgccttgcatggaaggtggttt
gctggaaaaatgatcacggctgcatatgtgccacttccaacttaccacaatctcttccca
gattcattgacaactacccagctgttgactccagcaagacgatag
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