Chiloscyllium plagiosum (whitespotted bambooshark): 122560322
Help
Entry
122560322 CDS
T08871
Name
(RefSeq) elongation factor 1-alpha 2
KO
K03231
elongation factor 1-alpha
Organism
cpla
Chiloscyllium plagiosum (whitespotted bambooshark)
Pathway
cpla03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
cpla00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
122560322
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cpla03019
]
122560322
03016 Transfer RNA biogenesis [BR:
cpla03016
]
122560322
03012 Translation factors [BR:
cpla03012
]
122560322
04131 Membrane trafficking [BR:
cpla04131
]
122560322
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
cpla04147
]
122560322
Messenger RNA biogenesis [BR:
cpla03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Trans-acting binding proteins
122560322
Transfer RNA biogenesis [BR:
cpla03016
]
Eukaryotic type
tRNA transport factors
tRNA export factors
122560322
Translation factors [BR:
cpla03012
]
Eukaryotic type
Elongation factors
122560322
Membrane trafficking [BR:
cpla04131
]
Autophagy
Chaperone mediated autophagy (CMA)
Other CMA associated proteins
122560322
Exosome [BR:
cpla04147
]
Exosomal proteins
Proteins found in most exosomes
122560322
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GTP_EFTU
GTP-eEF1A_C
GTP_EFTU_D3
GTP_EFTU_D2
MMR_HSR1
GTP_EFTU_D4
Motif
Other DBs
NCBI-GeneID:
122560322
NCBI-ProteinID:
XP_043566864
LinkDB
All DBs
Position
20:complement(58809059..58845223)
Genome browser
AA seq
464 aa
AA seq
DB search
MGKEKIHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAAEMGKGSFKYAWVL
DKLKAERERGITIDISLWKFETPKYYITIIDAPGHRDFIKNMITGTSQADCAVLIVAAGV
GEFEAGISKNGQTREHALLAYTLGVKQLIVGVNKMDSTEPPYSEKRYDEIVKEVSAYIKK
IGYNPITVPFVPVSGWHGDNMLEASPNMPWFKGWKVERKEGNANGVTLLEALDTILPPTR
PITKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGMVVTFAPVNITTEVKSVEMHHEALS
EALPGDNVGFNVKNVSVKDVRRGNVCGDSKNDPPTEACNFTAQVIILNHPGQISAGYSPV
IDCHTAHIACKFAELKEKIDRRSGKKLEDNPKTLKSGDAAIVEMSPGKPMCVESFSKYPP
LGRFAVRDMRQTVAVGVIKNVEKKAVTAGKITKSAQKAQKAQGK
NT seq
1395 nt
NT seq
+upstream
nt +downstream
nt
atgggcaaagagaagattcacatcaacattgtggtcatcgggcatgtcgattccggcaaa
tccaccaccaccggacacctcatctacaaatgtggcggcatcgacaagagaaccatcgaa
aaattcgagaaggaggcggcagagatgggtaaaggttccttcaaatacgcctgggtcctg
gacaagctgaaagctgaacgtgagcgaggtatcactattgacatctctctgtggaagttt
gagacaccaaagtattacatcaccatcattgatgctcctggccacagggacttcattaag
aacatgatcactggaacctctcaggctgactgcgctgtgctgatagtggctgctggtgtt
ggtgaatttgaagctggcatctccaagaacggccagacccgtgagcacgcgctcctggcc
tacactctcggggtgaagcagctcatcgtgggggtcaacaaaatggactccaccgagcct
ccgtacagtgagaagcgctacgatgaaattgtgaaggaagttagcgcctacattaaaaag
attggctacaacccaatcactgtcccctttgtgccagtgtccggttggcatggtgataac
atgttggaggcctcacccaatatgccatggttcaaaggttggaaggtcgaacgcaaggag
ggcaatgccaatggggtgaccctactcgaagccctggacacgattctgcccccaacccgc
cccatcaccaaacccctgcgcctgccccttcaggacgtttacaagattggaggtattggt
acagtccctgttgggcgtgtggagactggggtgctgaaaccgggcatggtggtgaccttt
gcccccgtcaacatcacgacagaggtgaagtcggtggagatgcaccatgaagccttgtct
gaggctctgcccggggacaacgtgggcttcaacgtgaagaacgtgtccgtcaaggatgtt
cgccgtggcaacgtgtgtggagacagcaagaatgacccacccacagaagcctgcaacttc
actgcccaggtcattatcctgaaccaccctgggcagatcagtgctggctactccccggtc
attgactgccacaccgcacacattgcctgcaagtttgctgagctcaaggaaaagattgac
cgccgttctggcaagaaattggaggacaatcccaaaaccctgaagtctggtgatgctgca
attgtggagatgtctcccgggaagcccatgtgcgtggagagcttttccaagtaccctcct
ctggggcgtttcgctgtgcgtgacatgaggcagacggttgccgtgggtgtcatcaagaac
gttgagaaaaaagcggtcactgctggcaagatcacaaagtctgcacagaaggctcagaaa
gctcagggcaaatga
DBGET
integrated database retrieval system
