Chiloscyllium plagiosum (whitespotted bambooshark): 122560456
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Entry
122560456 CDS
T08871
Symbol
ciita
Name
(RefSeq) MHC class II transactivator
KO
K08060
MHC class II transactivator [EC:
2.7.11.1
]
Organism
cpla
Chiloscyllium plagiosum (whitespotted bambooshark)
Brite
KEGG Orthology (KO) [BR:
cpla00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
cpla01001
]
122560456 (ciita)
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
cpla04054
]
122560456 (ciita)
Enzymes [BR:
cpla01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.11 Protein-serine/threonine kinases
2.7.11.1 non-specific serine/threonine protein kinase
122560456 (ciita)
Protein kinases [BR:
cpla01001
]
Serine/threonine kinases: Other
TAF1 family
122560456 (ciita)
Pattern recognition receptors [BR:
cpla04054
]
Cytoplasmic pattern recognition receptors
NOD-like receptors
122560456 (ciita)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NACHT
LRR_6
NLRC4_HD2
LRR_4
NB-ARC
LRR_14
AAA_16
AAA
nSTAND_NTPase5
nSTAND6
CARD
AAA_22
nSTAND3
RNA_helicase
Motif
Other DBs
NCBI-GeneID:
122560456
NCBI-ProteinID:
XP_043567023
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All DBs
Position
21:complement(49573913..49660133)
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AA seq
1298 aa
AA seq
DB search
MLILLSIWCKCQGMIHSRKDLLGLINVLSQAPPSKFQDLLSDLLEKGLLTKDGYRHYNQC
EPEDLPRTILVSVLGKEESYCQAFLSLLCSHFPWICGVFQQVSNNKDQTWRNGQPGNMRS
QSCTIQLPSLKDHSYLALLQEEHCSAQMAMSSTCGQNGEVTCGTGLDSNHCDLYKEILED
FCELDRTYEPCDVGIEGILKYLQDPRPLNAIELEQYFAANGDCPSASGIPSQDSTSFSDA
PRAKCLRGDEENLPPSPEHSNNSADILSPTIYLSDINHLKELKNHVAQIGSDASLNSVKG
DESIMNSPAVSSAGFQFFPSYAVPQQVVKVPVNGAVHSRASTCFLVLNESLATLEITTPL
STSPLHSPRSSIPESTPKNIPVDPWSALALTVNTDSQTASPEVSPTGPGFSSPQSVNVHS
SPESVTNAQPVDSPTSPVSLDSERLDLETESSGEESSGPSSPTIKSYSKTRGVEACTEMV
KEYLRDMSQHSYICHEHDEMLLEDIYVDVTMIEVQAENKSAKNASKCLDKECKIYDIAER
ERAAVNLSNLLNVSGKRPRETKIVSLLGRAGIGKSVLVQKICHDWVNGSFRQFEFVFWFK
CRMLNFAKQYTLKDLLFQPFLPTLKNTDEVFQYLCHNSRKVLLILDDFEDLHHHDGLLQS
SVCGSAERPHTVKQLLAGLLQRKLLKGCTMLITARPKETFNQYLGRVDKIVEVLGFHPLH
VQEFLHRYFEDSSLAAEAMVCLQEQRYLLSICSTPLLCRFICFVLKTKRRTGDGRLVLPS
TLTRLFLNIFHILLQGKTQHIMALHRQNILELSKHAFAGVQCHYSVCEASRAVEMSNFAL
KHGLLRPFLMNSEGKGQECGKTFSHSCLQNFLAGLYLLFSEDVKCKGLMKLISLEHRKRK
SQEDWLDVARRFLVGLAFQEGNEFLHGFSHHPKANVKGKKQKSLQKYLAELDVSALSTSK
LVELCHCVYETQSAELTARVAAKLDQRLSFRGTRLTATDIFVLLYMMQSSPNNFAVDLRE
TNIDLPGIQQFVELRNVTSFRVSVCDVIKLWEHLEQNGFRELLRQSLLKFSVNPFEIKSL
KDIDDLDLLVQIHKDRRFLSSTHDTTGSELYELPAVRTLQVLEFALGPVDGPQGFQKLTK
ILPALAFLKYLDLEGPSSQKVKMSENKIGDEGAERLAKVLSNLTSLEKLTLSRNQIADRG
AQELARSLPNLKFLKTLSLYDNIIGDKGAEKLAEILPIMKSLKVLDVKFNKITDTGAQRL
TQSLKDCPHIETIWLWSPTITHWMSEHIQQIDVRINLQ
NT seq
3897 nt
NT seq
+upstream
nt +downstream
nt
atgttgattttactttcaatatggtgcaagtgccaaggaatgattcactccagaaaagac
ctacttggcttgattaatgtactttcgcaagcacctccttcaaaattccaagatttactg
agtgacttgttggaaaagggccttttaacgaaggatggctatcggcattacaaccaatgt
gagcccgaggacttgccgcggaccatccttgtatctgttcttggcaaagaggaaagttac
tgtcaagcatttctctcccttctctgctcccattttccctggatttgtggggtgtttcaa
caagtttccaacaacaaggatcaaacatggagaaatggacaaccaggcaacatgagaagc
caaagctgcaccatacagttgccatcactaaaagaccacagctacttggctctgcttcag
gaggaacattgttcagcacagatggctatgtcaagcacctgcggtcagaatggagaagta
acttgtggaacaggtcttgacagtaatcattgcgacctttacaaagagattttagaggac
ttttgtgaactggatagaacttatgaaccatgcgacgttggcattgaaggaattttgaag
tatttgcaggacccacggccactaaatgcaatagaacttgaacaatattttgcggccaat
ggagattgtccaagtgcttcgggaattccatctcaagattccactagtttctcagatgct
ccgagagccaagtgtttaagaggagatgaagagaatctacctccttctccagaacattcc
aacaattcagcggacatcttgtctccaaccatctacctttcggacatcaaccatctgaag
gaactgaaaaaccatgttgcccagattggatcagacgcttccttaaactcagtcaaaggt
gatgaatcgatcatgaacagtccggctgtcagttctgctggtttccagtttttcccatca
tatgcagtaccacagcaagtcgtcaaggtgcctgtcaatggagctgtacattcaagagcc
tccacctgctttttagttctaaatgagagcttggcaactcttgagattacaacaccacta
tcgacatcgcctctgcattcaccacggagctcaataccggaatcaactcccaagaatatt
ccagtggacccatggagtgctttagctcttactgtgaacacagactctcagactgccagt
cctgaagtcagtccaactggtccaggcttctccagtcctcaatctgtcaatgttcatagc
tcaccagagtccgtgaccaatgctcagcctgtggatagtccaacctctccagtctctttg
gacagtgagagactagatcttgaaacagagtcatctggtgaagaatcatcaggaccatca
agtccaacaatcaagtcgtacagcaaaacaagaggtgtagaagcttgtacagaaatggtg
aaagaatatctgagagacatgagccaacattcttatatttgccatgaacatgacgaaatg
cttcttgaagacatttacgtggatgtcacaatgattgaggttcaagcagaaaataagtct
gcaaaaaatgcctcaaagtgtttggacaaggaatgcaaaatctatgatatagcagagcga
gaaagagctgctgtaaacttgagcaatctccttaatgtttcaggaaaacgaccaagagaa
accaaaatagtttccttactggggagagcagggatcggtaaaagtgtacttgtccaaaaa
atctgccatgactgggtgaatgggtccttcaggcagtttgagtttgttttctggtttaag
tgcaggatgctcaattttgcaaagcaatacactttaaaagatctacttttccagccgttc
cttccgaccttaaagaacacggacgaagtctttcagtatctctgccacaactcccgcaaa
gtcctgctcattttggatgactttgaagacttgcaccaccacgatggcctgctgcagtcc
tcggtgtgtggctcagcagagagaccccacaccgtcaaacagctgcttgcaggcctgctc
cagaggaagttgctgaagggttgcacgatgcttattacagcaaggccaaaagaaactttc
aaccagtatctcgggagagtggacaaaatagtggaagtgctggggtttcacccgcttcat
gtgcaggagttcctgcacaggtactttgaagactcctctttagctgctgaagccatggtt
tgtcttcaggagcagcggtacctgctcagcatctgctccacccctttactatgcagattc
atctgttttgttctcaaaaccaagcgccggactggagatggccgtttggtattgccatcc
actctcactcgtttgttcctgaacatttttcacatcctgttgcagggtaaaactcaacac
atcatggctttgcacaggcagaacatcctggagttgagcaaacatgcgtttgcgggggtc
cagtgccattacagtgtgtgtgaggcctccagagcagtagaaatgtccaattttgctttg
aagcacggccttctaagacccttcctgatgaatagcgaaggaaaggggcaggagtgcggc
aagactttctctcattcttgtctgcagaacttcctggcgggactttacttgttgttttcc
gaagatgtcaagtgcaaagggttgatgaagctaatctccttggagcacagaaagcggaaa
tctcaggaggactggctcgacgttgctcgcaggttcctggtaggactggcttttcaggaa
ggaaatgagttccttcacggcttctcccatcatccgaaggccaacgtcaaaggcaagaag
caaaagagcctgcagaaatatttggctgaactcgacgtctctgcactcagcaccagtaag
ttggtggagctctgtcactgtgtttatgaaacgcagagcgctgagctgactgcacgggta
gctgctaaactcgaccagaggttgtccttcagaggcacgaggctgactgcaactgacatc
ttcgtactgctctacatgatgcagagctcaccaaataactttgctgtcgacctgagggaa
acaaacatcgacttgcctggaatccagcagtttgtcgagttgaggaatgtcacctcattc
agagtgtcggtatgcgatgtgataaaactttgggaacatttggagcaaaatgggttccgt
gagctgcttcgtcagtcacttcttaaattttctgtgaatcctttcgagattaagagtttg
aaagatatcgatgaccttgatttactggtacaaattcataaagatagaagattcctttca
agcacacacgacacaacaggaagtgaactctatgagctacctgctgtcaggacattacag
gtgctggagtttgctcttggcccagtggatggacctcaggggtttcaaaaattaactaag
attctaccagctctggcatttttgaagtatctagatcttgaaggtccaagctcccagaaa
gttaaaatgagtgaaaacaaaattggagatgaaggagctgagagactagcaaaggtgttg
tctaatctaacatcgctagaaaaactgacattgtcgcggaaccaaatagctgaccgagga
gcacaggagctggctagatcacttcccaacctgaagtttttaaagacactgagtctgtat
gacaatatcattggtgacaaaggggcagaaaaattagcagaaatactcccgataatgaag
tcgttgaaagttctagatgttaaatttaataaaatcacagacactggagcccagaggctg
actcagagtttaaaagattgtccccatattgagacaatatggctatggagcccaacaatt
acacactggatgtcagaacacattcaacagattgatgttcgaattaatttacagtag
DBGET
integrated database retrieval system
