Chiloscyllium plagiosum (whitespotted bambooshark): 122560520
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Entry
122560520 CDS
T08871
Symbol
traf7
Name
(RefSeq) E3 ubiquitin-protein ligase TRAF7 isoform X1
KO
K10646
E3 ubiquitin-protein ligase TRAF7 [EC:
2.3.2.27
]
Organism
cpla
Chiloscyllium plagiosum (whitespotted bambooshark)
Brite
KEGG Orthology (KO) [BR:
cpla00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cpla04121
]
122560520 (traf7)
Enzymes [BR:
cpla01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
122560520 (traf7)
Ubiquitin system [BR:
cpla04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRAF proteins
122560520 (traf7)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_CDC20-Fz
WD40_Prp19
WD40_WDHD1_1st
Beta-prop_TEP1_C
Beta-prop_TEP1_2nd
WDR55
EIF3I
Beta-prop_EML
Beta-prop_SCAP
WD40_MABP1-WDR62_2nd
Beta-prop_CAF1B_HIR1
Beta-prop_EML_2
Beta-prop_WDR75_1st
Beta-prop_WDR90_POC16_2nd
NBCH_WD40
Beta-prop_IP5PC_F
WD40_like
Beta-prop_SPT8
zf-RING_UBOX
Beta-prop_DCAF4
zf-C3HC4
zf-C3HC4_2
zf-C3HC4_4
Beta-prop_Nup120_160
zf-TRAF
Beta-prop_EIPR1
Sina_ZnF
zf-C3HC4_3
Beta-prop_IFT140_2nd
zf-RING_5
WD40_MABP1-WDR62_1st
Beta-prop_LRRK2
WDR90_beta-prop_4th
DUF4164
PKcGMP_CC
Motif
Other DBs
NCBI-GeneID:
122560520
NCBI-ProteinID:
XP_043567137
LinkDB
All DBs
Position
21:9315982..9381767
Genome browser
AA seq
670 aa
AA seq
DB search
MTSTKNNRYNRFSGGAANIPVIDNTSITRMETTFGPAYSTVTTITKADGTNTFKQHRRTP
SSSSTLTYSPRDEDDVMPPISTPRRSDSAISVRSLHSESSMSLRSTFSLHEEEDEQEPLV
FAEQPSVKLCCQLCCSVFKDPVITTCGHTFCRRCALTSEKCPVDNAKLTVVVNNIAVAEQ
IGELFVHCKYGCRPGSNGKPGAFEVDPRGCPFTVKLSGRKDHEGSCDYRPVRCPNNPNCP
PLLKMNLDAHLKECEHIKCPHSKYGCTFVGNQDTYEAHLEVCKFEGIKEFLQQTDDRFHE
MQVGLAQKDQEIAFLRSMLGKLSEKLDQLEKSLELKFDVLDENQSKLSEDLMEFRRDASM
LSDELSHINARLNMGILGSYDPQQIFKCKGTFVGHQGPVWCLCVHSTGDLLFSGSSDKTI
KVWDTCTTYKCQKTLEGHDGIVLALCIQGNKLYSGSADCTIIVWDIPALQKVNTIRAHDN
PVCTLVSSHNMLFSGSLKAIKVWDIVGTDLNLKKELTGLNHWVRALVASQNHLYSGSYQT
IKIWDIRTLECVHVLQTSGGSVYSIAVTNHHIVCGTYENLIHVWDIESKEQVRTLTGHVG
TVYALAVISTPDQTKVFSASYDRSLRVWSMDNMICTQTLLRHQGSVTALAVSRGRLFSGA
VDSTVKVWTC
NT seq
2013 nt
NT seq
+upstream
nt +downstream
nt
atgacctcaaccaagaacaatcgctacaaccgtttctctggaggtgccgcgaacatacct
gtgatagacaataccagcattacaaggatggaaactacttttggtccagcgtattctact
gttacaaccatcactaaagctgatgggacaaataccttcaagcagcatcgacggaccccg
tcatcgtccagcaccttgacctattcaccaagggatgaggatgatgtaatgcctcctatc
agtactccacgtcggtcagactcagcgatatctgttaggtctctacactcagaatccagt
atgtccctacgatctacattttctctgcacgaagaggaagatgagcaggaaccattggtt
tttgcagaacagccttcggtgaagttatgctgccaactttgttgcagtgtgttcaaggat
cctgtcatcacaacatgtggacacacattttgtagaaggtgcgccttaacatctgaaaag
tgccctgttgacaatgcaaagctgacagttgtagttaataacatagctgtggctgagcag
attggagagttgtttgtccattgtaaatatggctgccggccaggttcaaatggaaaacca
ggggcctttgaagttgacccacgtggatgtcccttcactgttaaattgagtggtagaaaa
gaccatgagggcagctgtgactaccgaccagttcgttgtcctaacaatccaaattgtccc
ccgctcttaaaaatgaaccttgatgctcatcttaaagaatgtgaacacattaaatgtcct
cactccaagtatggatgcacgtttgttggaaatcaggacacctatgaagcccacctggag
gtgtgcaagtttgaaggtattaaggagttcctgcagcaaactgatgaccgctttcatgag
atgcaagtaggcctggctcaaaaagaccaagagattgccttccttcggtcaatgcttggg
aaactctctgagaaacttgaccagttggagaaatcactggagctaaagtttgatgttttg
gatgagaaccaaagtaaactcagtgaggatctaatggagttccgaagagacgcatcaatg
ctaagtgatgagctttcacacatcaatgccaggttaaacatgggaatcctgggctcttat
gaccctcagcaaatatttaagtgtaagggtacctttgtgggccatcagggtccagtttgg
tgtttatgtgtccactctactggcgatctgctcttcagtggctcttcagataaaactatc
aaggtatgggatacatgtacgacatacaaatgtcagaagactctggaaggacacgatggt
atagttttggctctgtgcattcaagggaacaagttatacagtggctctgcagattgcaca
ataattgtttgggatattccagctttgcaaaaagtcaataccatcagagcacatgacaat
ccagtttgcactttggtatcgtctcacaatatgctcttcagtggctcactcaaagctatt
aaggtctgggatattgtgggaacagatctaaatctgaagaaagaactcaccggtttgaat
cattgggtgcgtgcgctggtggcctctcaaaaccatctttacagtggatcctaccagact
atcaagatctgggacataaggactctagagtgtgtgcatgtactgcagacttctggtggt
agtgtatactccatcgcagttactaaccaccacattgtgtgtggaacctatgaaaatctt
atccatgtatgggatatagaatcaaaagaacaggttcgaacgctgactggccatgtaggc
acagtgtatgcgttggctgtaatttcaacaccagaccagaccaaggtcttcagtgcatcc
tatgatcgatcacttagggtttggagtatggacaacatgatctgtacacagacattgctc
cgtcaccaaggcagtgttactgctcttgctgtgtccagagggcgactcttctccggtgct
gtggacagtacagttaaagtctggacctgttag
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