Chiloscyllium plagiosum (whitespotted bambooshark): 122560620
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Entry
122560620 CDS
T08871
Name
(RefSeq) dmX-like protein 1 isoform X1
KO
K24155
rabconnectin-3a
Organism
cpla
Chiloscyllium plagiosum (whitespotted bambooshark)
Pathway
cpla04142
Lysosome
Brite
KEGG Orthology (KO) [BR:
cpla00001
]
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome
122560620
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cpla04131
]
122560620
Membrane trafficking [BR:
cpla04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
122560620
Endosome - Lysosome transport
Acidification regulators
Rabconnectin-3 complex
122560620
RAVE complex
122560620
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rav1p_C
Beta-prop_WDR5
Beta-prop_THOC3
Beta-prop_WDR3_1st
WD40
WD40_Prp19
WD40_CDC20-Fz
Beta-prop_TEP1_2nd
Beta-prop_EML_2
WD40_WDHD1_1st
WDR55
Beta-prop_WDR3_2nd
Beta-prop_WDR36-Utp21_1st
Beta-prop_WDR36-Utp21_2nd
EIF3I
WD40_Gbeta
Beta-prop_WDR90_POC16_2nd
Beta-prop_EML
Beta-prop_IFT140_1st
Beta-prop_VPS8
WD40_MABP1-WDR62_2nd
Beta-prop_HPS5
Beta-prop_Vps41
Beta-prop_DCAF4
WD40_MABP1-WDR62_1st
Beta-prop_EIPR1
Beta-prop_CAF1B_HIR1
Beta-prop_SCAP
VPS11_N
NBCH_WD40
Motif
Other DBs
NCBI-GeneID:
122560620
NCBI-ProteinID:
XP_043567375
LinkDB
All DBs
Position
2:66491862..66728493
Genome browser
AA seq
3060 aa
AA seq
DB search
MNLHQVLTGAVNPGDSCFSVGNVGDEPFTAYASGCDIVILASDFERLQIIPGAKHGNIQV
GCVDCSMHQGKIAASYGNVICIFEPIALLNQKTKHSTQLNYQWQKSGQFALESVVHNLAW
DPQGIRLLTGSSCLQLWSNGNLEANINEEEAADETDPSKVSDWRCIWESKTASPIHLLKV
SPDGEFFATVGKDDCLVKVWYNSSSWQTAVMAPVIPVDKKEGDIDFSFVYLAHPRAVTGF
SWRKTSKYMPRGLACNVLLTCCKDNVCRLWAETLLPSDTLISGDGHTQWSESVWTTNNLK
RNISNREKLNFRSFRIGRRRSSGLVAHSGYLPHQQDAHEVHRNSPLHANSLCHFHIAASI
NPATDIPLLPSITSLSLSEHEETNGPFVVHWLNNKELHFTLSMEVFLQQLRRNLEQQSPE
SVADDVGQMASKSDDDIDEGSEYHKGFMQSVLSDRGNGEKTSSAVMIDHKIEVLFAEWNK
NADMLFSIHPIDGSLLVWHVDWLDEYQPGMFRQVQVSFASRIPVAFPTGDANSLSKSIVM
YACTKNVDLAIQQGKLKPPGMTHSTSGMLISAGQNKSSGSLKLSIFTPNVLMISKHADGS
LNQWAVSFAEESAFSTVLGVSHKSRYCGHRFHLNDLACHSVLPLLLTTSYHNAIRTPDDG
NLHNESSFHSLQFRSSLSRNKRNIGTAAVFQDSNAIYSELILWRVDPVGPLSYSGGVSEL
ARINSLHVSAFSNVAWLPTLIPSYCLGAYCNSPSACFVASDGHYLRLYQAVIDAKKLLSE
LSNPEIAKFVGEVFNIVSQQSTARPGCIIELDAITELYGKETQLLHVFKEDFILVNQPKK
MQQKQGQTSNETSPQQEAEEPHDGFSEKFFLVVIEHKENNRSVLHMWHMHLKSDSISVDH
ATETPLLSPEDQNGFASEKLHSPFFKKYQACKANLQSASRLALSSKRVYSQELALPEGVE
ITRVTPSAGHLSSSSVHPACLAPYLLATSCSDGKVRFWRCQVSAHSASSAAGDSLESKFS
YCWEEWPLLIEGGLVNSSAVSVPGRPVDVSCSYTSRLAVAYKQSKQINEHSSKHFTMHVC
IFECESTGGSQWILEQTIHLDDLSLSGAILDPRISIDSNLVVYNKQESHLTDHQMTFEAK
PLVHLDWVSKEDGSHILTIGIGSKLLMYGQVSGMIQNQAKKEAPAVFSLSLWDNAKEVSQ
SRWVLLRSVDLVSSVDGSLSLPVSLSWVRDGILVVGMDCEMHVYSQWQPHDKLDPVITEV
ENGSTPSVVSLAKYGNVNGSNPYLFKKNLTRSMTGLAQKFGGKKIPFQWNVEMEDSGLFE
ASHDLSPTLPQYHPLQLLELMDLGKIRRSKAILSHLVKCIAGEVITVNDAETSHERRLRS
LTISASGSTARDPLMTNKSENPDYTEIDSIPPLPLCALLAADEDISHTTFEKPSKRPNIN
KKNCRQQSTVNNYDELFAMSNLGTDLPDGFSVDDDIEQKVIDLSQYSLTYFGPEHARVLS
SHLLHSSLPGLTSMEQMFLMALADTVATISTDIGESRERTQGGETLDECGLRFLLAMRLH
TFLLTSLPPVYRAQLLRQGLSTCHFAWAFHSEAEEELLNMIPAMQRGDPHWSELRAMGIG
WWVRSTNILRRCIEKVAKAAFQRNNDPLEAAIFYLAMKKKAVLWGLFRSLQDKKMTEFFG
KNFSDDRWRKAALKNAFALLGKQRFEQSAAFFLLGGSLKDAVEVCLERLHDVQLALVIAR
LYESEFEVSSTYKSILVRRILGYDPKSKCFNFSLRNSDPVLRSMAYWILEDYTNSLNTLL
EQGMKENDNCSVTEYSKSTSCSPGVFNFYNYLRTHPLLLRRHFASSEKTMSQMGLTVESD
LADKISLAERRLFFSTANAHFKAGCPMLALEVLSKMPAVTMKPKNLQNETSSYLTVNFSS
EESKHKVLGCDCSSSIVNGLGSKVPSDWLSNGQSTSSLSFDWSQSSLTIEDQPLELKWDS
DKEDEEEETGLSMKEINPQCPTAAKIEGESYCNFSSSADDFLSTSEDVIAAQLKFGACLK
ILTTELRTLSTGYEVDGGKLRFQLYNWLEREITALQKTCNYNVDLEAIKDSFDFPESEHA
GNGIVDQQKSLHQQRYLQRRRLWLLENQPLLRMFLSYCSLHGSHGGGLASVRMELILLLQ
ESQQEHSAKQVTSPFVQLASIPLLFACTASAKTVVANPRLHLSNLTQDIVNTIVEFDSPP
HPDMQNNKIYVMHTVAASLSACLYQCLCDGHYYGSSYANQFTGMVYQSFLFAQQRSNRAA
SLDGTITPNTSPDQWPGIKELNHLLNSAGDEDKPKLTILLCEVLTAVYLSLFVHGLGTHS
SNELFRLVAHPLDSKMWAAVFGGGVQQPLKNQIEPKSVTGRWLPEHSQQQIVMYSVDCVG
FSKALAVFNPARSASAAEGRTPDEHHNSFKGTGSKATNREAPSYSTSLPVVSQVIPVYKE
KFIPPELSIWDYFIAKPFIPAVQSKFEYDSEESQDSDDEEDVFASGTQLQEHSNSNSFSW
SLMRYAMVQLVLHNLKKFYPMAGLDLSELPVCSPSCHAILKTLQRWEQVLLRRLELFGGP
PKDFISMHASEGTMSSGPALLIHKALLEPTNTPFKSKHHTALPVKRLWQYLVKQEEVQEI
FIRNIFTKQRCHNEVEADSGYPGGRARIVHKESDIITAFAINKANRNCVAIATSHDIQEL
DVSAILATQIYTWVEDEFELESKGSDEFLVVHARDDFGDLQCSTPYTPTVPGTPINMPWL
GSMQTGRGASVMIKRNMNNARRMASHPTLPYYLTGAQDGSVRMFEWGHSHQLACFRPSGN
SRITRIRFNHQGNKFGIVDGDGFLTFWQTSPVALGATPKPYLTWQCHNKTANDFVFVSSS
TLIATAGQSSDNRNICLWDTLVPQTNSLVHAFTCHDSGATVLAYVSKQQLLISGGRKGYV
CIFDLRQRLLRQTFQAHDSPIKAIAVDTAEDYFITGSAEGNMKVWSLSTYNLIHTFSNEH
ARQSLFRNIGTGVMQIETGPANHMFSCGADGTMKMRVLPDRFSTGSGKLDIWQDDVRFIL
NT seq
9183 nt
NT seq
+upstream
nt +downstream
nt
atgaatcttcaccaggtcttaaccggtgccgtcaaccccggcgacagttgtttctcggtg
ggcaacgtcggcgatgaaccgttcacggcttatgcttcagggtgtgatatcgtgatttta
gccagtgattttgaaagacttcaaattattcctggagccaaacatggaaatatccaagtt
ggatgtgttgattgctccatgcatcagggaaagattgcagcatcgtatggaaatgtaatc
tgcatttttgagcccattgcacttttaaaccagaaaactaaacattctacgcagcttaat
tatcaatggcagaagagtggacaatttgcattggagtcagtggtgcataacttagcatgg
gatccacaaggaattcgtctcttgactggttccagttgtttgcagctttggtccaatgga
aatcttgaagctaatattaatgaggaggaagctgcagatgagaccgatccaagtaaagtc
agtgattggagatgcatctgggagtctaaaactgcatctcccattcatctattaaaagtg
tctccagatggtgaattttttgcaacagttggaaaggatgactgtcttgtgaaagtgtgg
tataattccagcagctggcagacagcagtgatggcaccagtcataccagtggataagaaa
gaaggagatattgatttttcttttgtatacttagcccatcctagggctgttactggattt
tcttggcggaaaaccagcaagtacatgccaaggggtctcgcatgtaatgttctgttgacc
tgctgcaaggacaatgtttgtcggttatgggcagagactttacttccaagtgatactttg
atttctggagacggccacactcagtggtctgaatctgtctggacaaccaacaacctgaag
aggaacatctccaatcgggaaaagttgaatttcagatcctttcgtatagggaggaggcga
tcatctggtcttgttgcacacagtggatatttaccccaccagcaggatgcacatgaagtc
cataggaattcacctctacatgcgaattcactctgtcactttcacatcgcagctagtatt
aatccagcaacagacattccactgctgccctccatcacttcattgagtttaagtgaacat
gaagaaactaatggaccttttgttgttcattggctaaacaacaaggaattgcactttacc
ttatcaatggaggtctttttacagcagttacgaaggaacctggagcagcaatctccagaa
tctgtagcagatgatgttggacaaatggcaagcaaatctgatgatgatattgatgaaggc
agtgaatatcataaaggatttatgcaatctgtactttcagacagaggtaatggagaaaag
acctcatcagctgtcatgattgatcataaaattgaagtgctattcgcagaatggaacaag
aatgcagacatgctcttcagtatccaccccatagatggatccttactggtgtggcatgtt
gactggcttgatgagtatcagcccgggatgtttcgacaagtgcaggtttcatttgcctct
agaattcctgtggcattccccactggagatgcaaactctctcagcaagagtattgttatg
tatgcctgtacaaaaaacgtagatcttgctattcagcaagggaaactgaagccaccaggc
atgactcattccacatctggcatgttaatctctgctggtcaaaataaatcatctggtagt
ttaaagctcagcatcttcacacctaatgtgctcatgatttcaaaacatgcagatggatcc
ttgaatcaatgggctgtcagttttgcagaagagtctgcattttcaactgtccttggtgta
tctcacaagtcacgttactgtggtcatcgctttcatctcaatgatttagcttgtcattcg
gttttgccattattgctgactacttcctaccacaatgcaatacggacaccagatgatgga
aacctgcacaatgaaagcagttttcactccttacaatttcgtagttcattgtctagaaac
aagagaaacattggtacagcagcagtgttccaggattccaatgcaatatatagtgaacta
attctttggcgagtagatccagttgggccattatcgtattctggaggggtatcggagttg
gccagaatcaattctctccatgtttcagctttttcaaatgtcgcttggctgccaacttta
atcccaagttactgtctaggtgcatattgcaattctcctagtgcttgctttgtggcaagt
gatggtcattatttgagattatatcaagctgttattgatgccaaaaagcttttaagtgag
ctttccaatccagaaatcgctaaatttgttggagaggtattcaatattgtaagccagcag
tcaacagcaagaccaggctgcataatagaattggatgcaatcactgagctttatgggaaa
gagactcagttacttcacgtctttaaggaggattttatattagttaatcaacccaagaaa
atgcagcaaaagcaaggacagacttctaatgaaaccagcccacaacaggaagcagaagaa
ccacatgatggcttttcagaaaaattctttttggtggtcattgaacataaggagaacaac
cgctcagtattgcatatgtggcacatgcacctgaaatccgattcaatatctgttgatcat
gctactgaaactccgttgttatctccagaggatcagaatggttttgcctctgagaagtta
cattctcctttcttcaaaaaataccaagcttgtaaagcaaatttgcaaagcgccagtcga
ttggcattgagctcaaaaagagtttatagccaagaattagctcttccagaaggagtggaa
atcactagagttactccctctgcagggcatctgagttcttcttcagtacatccagcttgc
cttgcaccatatcttctggcaacgtcttgctcagatggaaaagtccgattctggcgatgt
caagtgtcagctcattcagcatcttctgcagctggggatagtttggagagtaaattttcc
tattgttgggaagaatggcctttactgattgaaggaggacttgtgaacagcagcgctgtt
agtgtaccaggaagaccagtggatgtaagctgttcttatacaagccggcttgctgtggct
tacaaacagtcaaaacaaattaatgaacattccagtaaacacttcaccatgcatgtgtgt
atatttgaatgtgaatcaacaggaggctcgcaatggattcttgaacagacaatccatctg
gatgacttgagtctgtcaggtgccattttggatccaagaatcagcattgatagtaactta
gtggtttacaataagcaggaatctcatctgactgatcatcaaatgacttttgaagcaaaa
cctttggttcacttagattgggtttcaaaggaagatggatctcatatcttaacgatagga
attggatctaaacttctaatgtatggacaggtttctggaatgatacaaaatcaagccaag
aaagaagcaccagcagttttctctttgtctttgtgggataatgccaaagaagtgtctcag
tcgaggtgggtgcttctaagaagtgtggatttggtttcctcagtggatggatcattgtca
ttgccagtttcactttcttgggtgcgtgatggtatcctcgtggtgggaatggattgtgaa
atgcatgtttattcacagtggcaaccacatgataaattagatccagtgataactgaagtt
gaaaatggtagtactccttcagtagttagtctggcaaaatatggcaatgtgaatggttcc
aatccttacctattcaaaaaaaacctgacgagatcaatgactgggcttgctcagaaattt
ggtggtaaaaaaattccatttcagtggaatgttgaaatggaggactctggcctttttgaa
gcatctcatgatttgtctcccactctgcctcagtaccatcctttacagctcttggagtta
atggacttgggtaaaatcagacggtccaaagctatcctatctcatttagtcaaatgtata
gcaggagaagtaatcactgtaaacgatgctgaaactagccatgaacgacgactcagatct
ctgacaattagtgcaagtggcagcacggcaagagatcccttaatgacaaataaaagtgaa
aatcccgactatacagaaatagactcaatcccccctcttcctctgtgtgcacttttagct
gctgatgaagatatttctcataccacttttgaaaaaccaagcaaacgacctaatatcaac
aagaaaaattgcagacaacaatcaacagtaaacaattatgatgaattatttgcaatgtcc
aaccttggtacagatttacctgatggcttcagtgttgatgatgacattgagcagaaggtt
attgacctttcccagtacagtcttacctactttggccctgagcatgctcgggtactttct
agtcatttgctgcattccagtctgcctggtcttaccagtatggagcaaatgtttttaatg
gcattggcagatacagtggcaactatcagcactgacataggagagagcagagagagaacc
caaggtggagagacccttgatgaatgtggcttgagatttcttttagccatgaggctccat
acattcctgttaacatcactacctccagtctatcgagcacaacttcttcgtcaaggtcta
tctacttgtcattttgcctgggcctttcattcagaggcagaggaggagctgctaaatatg
atccctgcaatgcaaagaggagatccccactggtcagaacttagagctatggggataggc
tggtgggtacgcagcacaaacattcttcgcagatgtatagaaaaggtagctaaagctgca
ttccagagaaataatgatcctctagaagcagctatattttatctcgctatgaagaaaaag
gctgtattatggggtctgttcagatctctccaggataaaaaaatgacagagttttttgga
aaaaatttcagtgatgataggtggaggaaggctgcgttgaagaatgcctttgcgttgtta
ggtaaacaacggtttgagcagtcagcagctttcttccttttgggtggttcccttaaggat
gcagttgaggtttgtctcgaaagacttcatgatgttcagttagctcttgtaatagcacgc
ttatatgaatcagaatttgaagtgtcatccacctacaagtctatacttgtcagaaggatc
ctaggctatgacccaaagagcaaatgttttaacttttctctaagaaattctgatccggtg
ttgcggagtatggcatattggatattagaagattacaccaactcgctgaacactctgttg
gaacaggggatgaaagaaaatgataattgcagtgtgacagaatacagcaagtctacttca
tgcagtcctggggtatttaatttctacaactatttgcgaacccatccacttttgttgcga
cgacactttgcttcttcagagaagacaatgtcacagatgggtttaactgtggaaagtgat
ctggcagataagatcagcttagctgaaagacgattgttcttttcaactgcaaatgcacac
tttaaagctggttgtccaatgttagctcttgaagttttgtctaaaatgcctgcagtcacc
atgaaaccaaagaatttacagaatgaaacaagctcttatttgacagttaatttttcatcc
gaagaatctaaacataaagttttgggttgtgattgctcgtcatcaatagtcaatggtttg
ggatcgaaagttccatctgattggctgtcaaatggacaatccacttcgtctcttagtttt
gattggagtcagtcatctctaacgattgaagaccagccattagaattaaaatgggatagt
gataaggaagatgaagaggaggagactggcctgtcaatgaaggaaataaatccacagtgt
cccactgctgcaaagatcgaaggagaaagttactgtaatttctcaagttcagctgatgat
tttttaagtacatcagaagatgtcattgcagcacagttaaaatttggagcttgtttgaag
atacttacaacagagctacgtacattgtctactggatatgaagttgatggtggaaaactc
cgcttccaattatacaattggcttgaaagagaaattacagccctacagaaaacatgtaat
tacaatgttgatcttgaagctatcaaagatagttttgactttcctgaaagtgaacatgca
ggaaatggtattgttgaccaacaaaagtcattgcatcagcaaaggtatttacaacggagg
agactgtggcttctggaaaaccaaccacttctaaggatgtttcttagttattgtagtctc
catgggtctcatggtggaggcctggcatcagtcaggatggagttgattcttcttttacag
gaatcgcaacaggagcattcggcgaaacaggttactagtccttttgtgcaacttgcatca
atacccctgctatttgcctgcactgcaagtgccaaaactgtggtggctaatcctagactc
catctaagcaaccttacccaggacattgtgaatactattgtagaatttgattctcctcca
catccagacatgcaaaacaacaagatctatgtaatgcacactgtggcagcttctctgtct
gcatgcctgtaccaatgcctttgtgatggccattattatggttcttcatatgcaaaccag
ttcactgggatggtataccagagttttctgtttgcgcagcaacgttcaaacagagcagca
agtttagatggtacaataactcccaacacttctccagaccagtggccaggtataaaggaa
ctaaatcatctcttgaattctgctggagacgaggataaacccaaactgacaatcctactc
tgtgaggtattgacagcggtttaccttagtctttttgttcatggcttgggaacgcactcc
agcaatgagctattccgccttgtagctcatcctctcgatagcaaaatgtgggctgcagtt
tttgggggaggtgtccagcaacctctgaagaaccaaatcgaacctaaatctgtaacagga
aggtggttacctgagcatagtcaacagcagatagtaatgtactccgtggattgtgtgggg
ttttcaaaagctcttgcagtcttcaatcctgcgcgttctgcaagtgcagcagaaggtcgt
actcctgatgagcatcataactctttcaagggcacaggctcaaaagcaacaaacagagaa
gcaccctcatacagtacttctcttccagttgtcagtcaggtgattccagtctataaagag
aagttcatccctcctgaactcagcatctgggattactttatagcaaagcccttcattcct
gcagtacagagcaaatttgagtatgattcagaagaaagtcaggacagtgatgatgaggaa
gatgtttttgcttcaggcacacagcttcaggagcattcaaattctaactcgttcagctgg
tccttgatgcgatatgctatggtacagttggtgcttcataatttgaagaagttttatcca
atggcagggctggatctatcagagctcccagtttgttctccttcctgccatgcaatttta
aaaactcttcagcgctgggaacaagtgttacttcggcgtcttgagttatttggtggccct
cctaaagatttcatctcaatgcatgccagtgaaggcacaatgtcttcaggtcctgctctc
ctcattcataaagcattgctggagcccaccaatacaccattcaagtcaaaacaccacacc
gctcttcctgttaaaagactttggcaatatcttgtgaaacaggaagaagtacaagagatt
ttcattcgaaatattttcacaaaacagagatgtcacaatgaggtggaagctgattctggt
taccctggtggaagggcaaggattgtgcataaagaatctgacatcattacagcatttgca
attaataaagctaatcggaactgtgttgccatagccacaagtcatgatatccaggaacta
gatgtgtctgcaatcctggctacccagatctacacttgggttgaagatgagtttgaactg
gaatcaaaaggatctgatgagtttctggttgttcatgctcgagatgattttggtgatttg
cagtgcagcacaccttatactcccacagttcctggcacaccaataaacatgccatggctg
ggcagcatgcagactggcagaggggcgtctgtgatgatcaagaggaatatgaacaatgcc
agaagaatggcttcacatccaaccctaccttattacctaactggtgctcaagatggtagt
gttcgaatgtttgagtggggtcactctcatcaactagcatgctttcgaccttctggcaac
tccaggataaccagaatacgatttaatcatcagggtaataagtttggaattgttgatggt
gatggattcttgaccttctggcaaacaagcccagttgctttaggagctacacccaaacct
tatctgacctggcagtgccataacaagactgcaaatgattttgtttttgttagttcgtct
actttaatagcaacagctggacaatctagtgacaacaggaatatctgcctttgggataca
cttgtgccacaaaccaatagtctagttcatgctttcacctgtcatgacagtggagccacc
gttttggcatatgtatcaaagcagcaacttttgatatctggtggaagaaagggttacgtt
tgtatatttgatctacgtcagcgactgctgcgtcaaacctttcaggcacacgattcacct
ataaaagcgattgctgtagatacagcagaggactacttcattactgggtctgctgagggt
aatatgaaggtttggagtttgtctacttacaacctgattcacacattctcaaatgaacat
gctcgacagtcactcttcagaaacattggaacgggagtcatgcagatagagactggtcca
gcaaatcacatgttctcgtgtggagctgacggtacaatgaagatgcgtgtcctgccagat
cgttttagcacaggaagtggcaagttagatatctggcaagatgatgttagatttatatta
tga
DBGET
integrated database retrieval system
