Chiloscyllium plagiosum (whitespotted bambooshark): 122560728
Help
Entry
122560728 CDS
T08871
Name
(RefSeq) trinucleotide repeat-containing gene 6A protein-like isoform X1
KO
K18412
trinucleotide repeat-containing gene 6 protein
Organism
cpla
Chiloscyllium plagiosum (whitespotted bambooshark)
Brite
KEGG Orthology (KO) [BR:
cpla00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cpla03019
]
122560728
03036 Chromosome and associated proteins [BR:
cpla03036
]
122560728
Messenger RNA biogenesis [BR:
cpla03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
122560728
Chromosome and associated proteins [BR:
cpla03036
]
Eukaryotic type
Gene silencing
piRNA pathway
122560728
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TNRC6-PABC_bdg
Ago_hook
RRM_1
RRM_occluded
Motif
Other DBs
NCBI-GeneID:
122560728
NCBI-ProteinID:
XP_043567644
LinkDB
All DBs
Position
21:complement(32646710..32817830)
Genome browser
AA seq
2081 aa
AA seq
DB search
MRGLEANATKEAQDKLNRDRVQEKEEQLMEERKKRKDDKKKKEAALKKAIEQKNKVPEPT
KTSQSQPQPANPNSGTSTTTSNNSNAKRVPANTQQQALSRYPPREVPPRFRHQEQKQLLK
RGQQLPSAVGTTTPVLTNLSGGSAVTLHPVTNGQLQYSSKTQTGMPPIRDLVSHSPNQSD
LNHSGLGSHYENSHWGPVSTNGDSSTNWDKVIVDGSDKEAWPSITGSDPELASECMDVDS
ASSSGSEKNLNIMASGSTDDDGNRTGNGNGSSSQFVVGNVGNNVGNGSINGPWGGSRGPL
SSTCQGSSENVDGKPESDHGKLNAWGSIGSTSTANLGGWPILENDGNAVHGPMPGSNSGN
NVQRSTVGQMLNNQSVNMELSIHGSWEGMQDNAGAEVNGTRNISFSGQPQNLNTEMNGPN
NTTNPLTSSLPNSTSSMQTNELPKLTGPGGWGVPLGMSTVNPSQLQATSITNGTSVSKPG
NGGISEGMNSGSNGTTWGTSGTNYPGEKCPGSNSNLGQTCGDTVNATLAQSAVNGSGSTA
YRSNGGSNRGGVAWESGVVNTHNIAWGAGNNTGSGGARRVWGNSAPNANTGTNVSNGEWS
KLPNNQHSNNGLNGNCNRKGTNGWKNLDDALCGQNQNTVCQPNEQNNVWVRTPSTSGTAD
SEGSTESTGSRHDRMSVGSGDGTGRRGEKRKPDQPGMVQSILSRTDLDPRVLSNTGWGQT
PIKQNTAWDIEPSAKSERKTDNGTEAWGGCVAQTSNSGGWGDGPGPVSNDTSSVSGWGDP
KPATVSCNTGWGDTKGSSSQGGWEDNSAATGLVKSNQTWGGNKEEKSATWNDAQKVKQGW
VDGQKSNQGWGISGADGWGENSRNGQWGDSQKSSSATWDNDGERSGWNESGRSSTGRSTW
ASSNNSNPNSTSGWGDPAKAAQSPGWGEPAKAAQPQGWGEPAKAAQPQGWGEPTKPNSSA
DWTKPQDSNGSWGAAPPPNKSSGSGWLNGPMPASSKEEEPTGWEEPSPESIRRKMEIDDG
TAAWGDPSKYNYKGVNMWNKNTHSSGNNSEQPAQVQPPPAPQQTPPQQLPQQMPPPSAMQ
NKENGGSGWGDPCNVQTNTESTWGEPPALTATVDNGTAAWGQPMDTGTSWREPVNDNAGT
SGWGNTPAAPPPPNRPVPKPMQDGWGDEEASVPGTRHSSWEEEEGESVMWNSNISQDSTS
SSNWTSKKMAQKGMIKGGNKQDDMWMNQLMKQFSNIGFPRESAEETKSNKMDIPIGVLRD
KRMEMDKHGMNIGEYNGIIGKGHASRPLISKESSMERNPYYDKLSLSLSNQDGIIAEEPQ
NLSYMSAPSVKLPPSNSALPNQAFGSMGLGIQNLNSVRQNGNPNIFGGSNAAAQARGMQQ
PPAQPLNSSQPNLRAQVPPPLLSPQVPASLLKYATANGSLNTALLNFGPQQVAMLNQLSQ
LNQLSQLSQISQLQRLLLQQQKAQNQRNVPGPMRQSQEQAARVLNMQQMLQHPRQLETSL
LKQQPPPPHQPSMKPFPENLMPPTPHELQTKEPPSLNTYSSYPLGGFPQPSPGQSDPTVS
QAAHLSPMPSQYPMPKMFLPDNSPNHNLLSPPLCNASNHIPGSPIHQHAGRKPATQERSL
SRGLNPNLNVPLDFGSIVNLKEPQSQQSRLKQWTASENLPVNSSLDQNSSKHGATSSGLS
ICSGKLLEESPFGHFDISMNSLASPPGSIGDGWPSAKSPSDKLSSNVNWPPEFRPGEPWK
GYQNIDPETDPYVTPGSVMTSLSISTARDLDLLRDRNNGSSSSMNTTLPSTSAWSLVGAS
SYNSSLSSTAQSTPARIGDPKSTWSPGPVTNASLAHELWKVPLPPKNTTAPSRPPPGLTN
QKPSSSWGNSSLRVGGGWGTSESRYNPGPSWGDISSGRITNWLVLKNLTPQIDGSTLRTL
CMQHGPLITFHLNLPHGNALVCYSSKEEAAKAQKSLHMCVLGNTTILAEFASEDEINRFF
AQGQSLTPSLGWQSLGSSQNRIASIESSHPFSNRNDLNHWNGAGLSGTGSGDLHGTSLWG
TPNYSTSLWGTPSSNDTRGIGSPSPINAFLPVDHLGSGESI
NT seq
6246 nt
NT seq
+upstream
nt +downstream
nt
atgagaggattggaggctaacgctaccaaagaagctcaagataaactaaacagggataga
gtgcaagaaaaggaagaacagttgatggaagaaaggaaaaaaagaaaagacgacaagaag
aaaaaggaagccgctttgaagaaggcaattgaacaaaaaaataaagtgccagaaccaacc
aagaccagtcaaagccagcctcagcctgccaaccccaacagcggcacttccacaactacc
agcaacaatagcaatgccaagcgtgtcccagccaacactcagcagcaagccttgtctcgt
tatccacctcgtgaagtaccgccgcgctttagacaccaggaacaaaagcaactgctgaaa
agaggccagcaactaccatcagcagttgggaccacaacaccagtactcaccaatttgtct
ggaggcagtgctgtaactctacacccagtaaccaacgggcagctgcaatacagcagcaaa
actcagacaggcatgcctcccattcgggatttggtcagccactcccctaaccagtcagat
ttaaaccacagtggtttgggatcgcattatgaaaactctcactggggacctgtctctacc
aatggtgactcttctacaaattgggataaagttattgtagacgggtctgacaaagaagcc
tggccttcaatcactggcagtgacccagagttggcttcagaatgtatggacgttgactct
gcttcaagctctgggtcagagaagaacctcaatatcatggcttcggggagcacggatgat
gatggcaacagaacaggcaatggaaatggatcttcaagtcagtttgtggttggaaatgtc
ggcaataatgtaggaaatggaagtattaatgggccttggggtggatctcgaggccctttg
tcaagcacatgtcagggttcatcagaaaatgtagatggcaaaccagaaagtgaccatggt
aaactgaatgcttggggcagcataggttccacatcaactgccaacctaggtggctggcct
attttagaaaacgatggaaatgctgtgcatggacctatgcctggtagcaattctggcaac
aatgttcaacgtagcactgtaggtcaaatgctaaataatcagagtgttaatatggaattg
tcgattcatggttcttgggaaggaatgcaggataatgcaggtgcagaagttaatggtaca
aggaacatttcattcagtggacaacctcaaaaccttaacactgaaatgaatggaccaaat
aacactactaaccctttgacctctagcttaccaaactctactagttcgatgcagacaaat
gaactgcctaaacttacagggcctgggggatggggtgtacccttaggaatgagcacagta
aacccatctcagcttcaggccacttcaattacaaatggcacttccgtttctaaaccaggc
aatggaggaattagcgaaggaatgaacagtgggtctaatggtacgacttggggtacatct
ggcactaactaccctggagaaaaatgtccaggctcaaacagcaatttgggacaaacttgt
ggtgacactgtgaatgcaactctagcacaatctgctgtcaatggatctgggagtactgcc
tacagaagtaatggtggaagcaatagaggtggagttgcttgggaatctggtgtggtcaac
acccataatattgcttggggggcagggaacaatacaggctccggaggggctagaagagtc
tggggaaactcagcaccaaatgcaaacactggcactaatgtctcaaatggggaatggagc
aaactgcctaataatcagcattccaataatggtctaaacggaaattgtaacaggaaggga
acaaatggatggaagaatctagatgatgctctttgtggtcaaaatcagaatactgtgtgt
cagccaaatgaacagaacaatgtgtgggttagaactccatcaacgtctggtacagcagac
agtgaaggaagcacagagagcacagggagtcgtcatgatagaatgagtgtaggaagtggt
gatggcactggcagacgtggtgaaaaaaggaaacctgaccaacctggaatggtccaaagt
attctgagtagaactgacttggatccacgtgtcctttccaatacaggttgggggcagact
ccaatcaaacaaaacactgcctgggatattgaaccttcagcaaagagtgagagaaaaact
gacaatggaacagaagcttggggaggttgtgttgctcaaacttctaactcaggggggtgg
ggggatgggcctggccctgtcagtaatgatacctcatcagtatctggatggggcgatcca
aagcctgctacagtctcttgcaacacaggatggggagacaccaaaggctcaagcagccaa
gggggttgggaggataattctgctgctacagggttggttaagagtaatcaaacatgggga
ggaaataaagaagagaagtcagctacatggaatgatgcgcaaaaggtcaagcaaggatgg
gttgatgggcagaaatcaaaccaaggttggggaatttctggagctgacggatggggagaa
aattcaaggaacggccagtggggggattcccagaagagtagttcagccacttgggacaat
gatggtgagagatctgggtggaatgaatctggaagatcaagcacaggccgaagcacttgg
gcaagtagcaacaattcaaaccccaacagtacttcaggctggggtgatccggccaaggct
gctcagtccccggggtggggcgaaccagctaaagctgctcagccccagggctggggagag
ccagccaaggctgctcagccccagggctggggggagcccaccaaaccgaatagctctgca
gactggactaagccgcaggacagtaatggctcttggggagctgcacctcctcctaataaa
tcctctggctctggctggctcaatggcccaatgccagcctcatcaaaagaggaagaacct
acaggctgggaggaaccttcaccagagtctattcgccgcaaaatggaaatcgatgatggc
actgctgcctggggagacccgagcaagtataactataagggtgtgaatatgtggaacaaa
aacacacacagcagtggcaacaactctgagcagccggcacaggtccagcccccgccagca
ccgcagcagactccgccacaacagttgccacagcaaatgccaccaccaagtgccatgcaa
aacaaagagaacggtggctctggttggggagacccttgcaacgttcagacaaacactgaa
tccacttggggagagccaccagctctaactgcaacagtggacaatggaactgcagcctgg
ggtcaacccatggatacaggaaccagctggagagagccggttaatgacaatgctggtacc
tctggatggggtaacaccccagctgccccaccacctccaaatcgacctgtgcccaaacct
atgcaagatggctggggtgatgaggaagcatcggtgccaggaacccgtcactccagctgg
gaggaagaagagggagagtctgtgatgtggaacagcaacatctcacaggatagcacctcc
tcttcaaactggacatcaaaaaagatggctcaaaagggcatgataaaagggggaaacaaa
caagatgatatgtggatgaatcaattaatgaagcaattctctaacattggatttcctagg
gagtctgctgaagaaaccaagagcaataagatggacatacctattggtgtgttgagagat
aaaagaatggaaatggacaagcatggcatgaacattggagaatataatggcattataggc
aaaggacatgcttctcgtcctctgatttccaaagagtcttccatggaacgcaatccttac
tatgataagctgtctttgtctctgtccaatcaagatggcattatagcagaagagccccaa
aacctatcgtacatgtccgcaccaagtgtgaagcttcccccttcaaacagtgcactacct
aatcaggcctttggctcaatggggctgggcattcaaaacttgaattctgttagacagaat
ggcaatcctaatatatttggcggcagcaatgcagcagcacaagccaggggcatgcaacag
cctccagcacaacctcttaactcatctcagcctaatctccgcgctcaagtgcctcctcca
ttattatcccctcaggttccagcatcattactgaagtatgcaacagctaatgggagccta
aacactgcactattaaattttggcccccagcaggtagccatgctgaaccagctctcccag
ttgaaccaactgtctcaactttcacagatctcccagctacagcgactgctgcttcagcaa
cagaaggcacagaatcagaggaatgtgccaggacccatgcgtcagtctcaagaacaggct
gctcgtgtgctcaacatgcaacagatgctgcaacacccccgtcaactggaaacaagcctt
ctgaagcagcagcctccaccaccgcatcagccctccatgaagcctttcccggagaacctc
atgccccccaccccacatgagctgcaaacgaaagagccgccttcgctcaacacatacagc
agctaccctttaggtgggtttccacaacccagtccaggtcaatctgatcccacagtatcg
caagctgctcacctttccccgatgccctctcaatatcctatgcccaaaatgtttcttcct
gacaacagccctaaccacaacctcctcagccctccactgtgtaatgcaagcaaccacata
ccaggctcacccatccatcaacatgcaggaaggaagcctgccactcaagaaaggtctttg
tcaagaggcttgaatccaaacttgaatgtacccctggatttcggcagtattgttaacctg
aaagagccacaatcccaacaatcccgactgaagcaatggactgcttcagagaaccttcct
gttaattcctctctagatcaaaactccagcaaacatggtgctacttcaagtggtcttagt
atttgttctggcaagttgcttgaagaatctccttttggtcactttgacatttccatgaac
tctctggccagtcctcctggatctattggagatggctggccaagtgccaaatcacccagt
gataagctctctagcaatgttaactggccaccagagtttcgtcctggtgagccttggaaa
ggttatcaaaacattgaccctgaaactgacccttacgtcactcctggcagtgtgatgaca
agtctatcgatctctactgcccgggatcttgacctcctcagggacaggaataatgggtcg
tcctcatctatgaacaccacgctgccttcaactagtgcctggtcccttgttggtgcctcc
agctacaatagttccctcagcagtacagcacaaagcactccagccagaatcggtgacccc
aaatccacttggtctcctggtccagttaccaatgcttcccttgctcatgagctgtggaaa
gtccccctgccccccaaaaacactactgctccatcccgtccaccaccagggttgactaat
cagaagccttcgtcctcgtggggaaatagctcgctgcgtgtgggcggaggatgggggact
tcagagtccagatacaatcctggtccaagctggggtgacatcagctcagggagaataacc
aattggcttgttctcaagaacctcacgcctcagattgacggctctactttgcgtacactg
tgcatgcagcacggcccactaataacattccaccttaacctgccccatggaaacgctttg
gtctgttacagttcgaaggaagaggcagccaaggcacagaaatctctacacatgtgtgtt
ttagggaacactaccattcttgctgagtttgccagtgaagacgagattaatcgcttcttt
gcacaaggccagtcgctgaccccctctctgggctggcaatctctgggatccagccagaac
cgtatcgcatccattgaaagttcccacccattctcaaatcgcaatgatctcaatcactgg
aatggtgctgggttgtctggaacaggtagtggagacctccatggcacttcactctggggt
acccccaattattccacaagcctgtggggaaccccaagcagcaatgacacgcggggaatc
ggcagcccctcccccatcaatgctttcctccctgttgaccaccttggaagtggagagtcc
atctga
DBGET
integrated database retrieval system
