Chiloscyllium plagiosum (whitespotted bambooshark): 122560776
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Entry
122560776 CDS
T08871
Symbol
shmt1
Name
(RefSeq) serine hydroxymethyltransferase, cytosolic
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
cpla
Chiloscyllium plagiosum (whitespotted bambooshark)
Pathway
cpla00260
Glycine, serine and threonine metabolism
cpla00630
Glyoxylate and dicarboxylate metabolism
cpla00670
One carbon pool by folate
cpla01100
Metabolic pathways
cpla01200
Carbon metabolism
cpla01230
Biosynthesis of amino acids
cpla01240
Biosynthesis of cofactors
cpla04981
Folate transport and metabolism
Module
cpla_M00141
C1-unit interconversion, eukaryotes
Brite
KEGG Orthology (KO) [BR:
cpla00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
122560776 (shmt1)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
122560776 (shmt1)
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
122560776 (shmt1)
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
122560776 (shmt1)
Enzymes [BR:
cpla01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
122560776 (shmt1)
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Motif
Pfam:
SHMT
Aminotran_1_2
Motif
Other DBs
NCBI-GeneID:
122560776
NCBI-ProteinID:
XP_043567790
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Position
21:38038278..38074832
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AA seq
481 aa
AA seq
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MANIIGNTSDRWETHTAMLVEPLSTNDPEVYDIIKKEKSRQRLGLELIASENFASRAVLE
ALGSCMNNKYSEGYPGQRYYGGTEFVDELERLCQKRALDLYNLDPEKWGVNVQPYSGSPA
NFAVYTALVEPHGRIMGLDLPDGGHLTHGFMTEKKKISATSIFFESMPYKVNPETGYIDY
DRLADNAQLFHPKLIIAGVSCYSRNLDYARMRQIADDNGAYLMSDMAHISGLVAAGVVPS
PFEYSDVVSTTTHKTLRGCRSGMIFYRKGVRSTDPKTGKEIMYNLESLINQAVFPGLQGG
PHNHAIAGVAVALKQAMTPEFKLYQKQIVANCKALSSALVNLGYKIVTGGSDNHLILVDL
RNQGTDGGRAEKVLEKCAIACNKNTCPGDKSALRPSGLRLGTPALTSRGFQEEHFRTVAA
FIHRGIQITLEIQRDVGAKASLKEFKERMMTDKDYQSKIRQLKEEVEMFASKFPIPGLAD
L
NT seq
1446 nt
NT seq
+upstream
nt +downstream
nt
atggcaaatatcattggtaacacttcagacaggtgggaaactcatactgcaatgctggtg
gaacccctcagtaccaatgatccagaggtatatgacatcattaagaaggagaagagccgt
cagagacttggcttggagctcattgcctctgagaactttgcaagccgagctgtgttggag
gctctgggctcgtgcatgaataacaaatattctgaggggtatcctggacagaggtattat
ggtggcactgagtttgtagatgagttggaacggctgtgccagaaacgagcattggatcta
tacaaccttgacccagagaaatggggagtcaatgtccagccatattcaggctctccagcg
aactttgctgtttacacagctctcgtggagccacatgggagaatcatgggattggacctt
cctgatggtggccacttgacccatggcttcatgactgaaaagaagaaaatttctgccacg
tccatcttctttgagtcaatgccatacaaggtaaaccctgaaactggttatattgactat
gacaggttggcagataacgcccaactcttccacccaaagctcatcatcgcaggggtgagc
tgttactcccgtaatctggattatgccaggatgcgacagattgctgatgacaatggtgcc
tacctgatgtcagacatggcacacatcagtggcttggtggcagccggggtggtgccctct
ccatttgaatacagtgacgtggtttccacaacaacacacaagaccctccgtggctgcagg
tccgggatgatcttctacagaaaaggagttcgcagcactgatccgaagacaggaaaggag
atcatgtacaacttggaaagtctgatcaatcaggcagttttcccggggctgcaaggtggg
ccccacaaccatgccatcgcaggagttgctgttgcactcaaacaggcgatgactccagaa
ttcaagctttaccaaaaacagattgtggcaaactgcaaggctctttcatcagcattggtg
aatctgggatacaagattgttactggtggctcagataatcatctgatcctggtggatcta
cgcaaccaaggcacagatgggggcagagctgagaaggttctggaaaagtgcgccattgct
tgcaacaagaacacctgtccaggtgacaaaagtgccttacgtcccagtggccttcgcctg
ggaacaccagctctcacctcccgaggattccaggaagagcatttccgcacagtcgcagct
ttcattcacagagggatccagataacactggagattcagagagacgttggtgcaaaggca
tcactcaaagaattcaaagagaggatgatgactgacaaggactaccagagcaagatcaga
caactaaaggaggaagtggagatgtttgcgtccaaattcccaattcctgggttggctgat
ctttaa
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