Chiloscyllium plagiosum (whitespotted bambooshark): 122560808
Help
Entry
122560808 CDS
T08871
Name
(RefSeq) actin-related protein 2/3 complex subunit 1B-like
KO
K05757
actin related protein 2/3 complex, subunit 1A/1B
Organism
cpla
Chiloscyllium plagiosum (whitespotted bambooshark)
Pathway
cpla04144
Endocytosis
cpla04517
IgSF CAM signaling
cpla04530
Tight junction
cpla04810
Regulation of actin cytoskeleton
cpla05100
Bacterial invasion of epithelial cells
cpla05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
cpla00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
122560808
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
122560808
09144 Cellular community - eukaryotes
04530 Tight junction
122560808
09142 Cell motility
04810 Regulation of actin cytoskeleton
122560808
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
122560808
05100 Bacterial invasion of epithelial cells
122560808
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cpla04131
]
122560808
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
cpla04812
]
122560808
Membrane trafficking [BR:
cpla04131
]
Others
Actin-binding proteins
Arp2/3 complex
122560808
Cytoskeleton proteins [BR:
cpla04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Arp2/3 complex
122560808
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_EML_2
Beta-prop_THOC3
Beta-prop_WDR5
Beta-prop_WDR3_1st
WD40_CDC20-Fz
WD40
WD40_WDHD1_1st
WD40_Prp19
ANAPC4_WD40
Beta-prop_RIG_2nd
Beta-prop_CAF1B_HIR1
WDR55
Beta-prop_Aladin
Beta-prop_WDR36-Utp21_2nd
Beta-prop_WDR35_TULP_N
Beta-prop_WDR3_2nd
Beta-prop_WDR19_1st
PEP5_VPS11_N
Beta-prop_WDR75_1st
Beta-prop_HPS5
WD40_Gbeta
Beta-prop_TEP1_2nd
Beta-prop_IFT140_1st
Rax2
eIF2A
WD40_MABP1-WDR62_2nd
WD40_MABP1-WDR62_1st
RMC1_N
EIF3I
WDR90_beta-prop_4th
RAG2_PHD
Beta-prop_SPT8
DUF4423
Motif
Other DBs
NCBI-GeneID:
122560808
NCBI-ProteinID:
XP_043567853
LinkDB
All DBs
Position
21:complement(43707587..43740630)
Genome browser
AA seq
369 aa
AA seq
DB search
MSYHSFLLEPISCHAWNKDRTQIAICPNNHEVHIYKKEGSKWNRIHELKEHSGHVTGIGW
APESNRIVTCGTDRNAYVWTLKGNVWKPTLVILRINRAARCVKWSPKENKFAVGSGSRVI
SVCYFEQDNDWWVCKHIKKPIRSTVLNLDWHPNNVLLAAGSSDFKCRVFSAYIKEVEEKP
SPTPWGSKMPFGELLFESSGTGGWVHGVCFSDSGNRLVWVSHDSTVCVTDANKKSMIATL
DTASLPLLTVTFITENSLVAAGHDCYPVLFTYDSSKDTVTFSKKLDIPKQKVQGGMTALA
KFRNLDKTASADNTTTSLETLHKNSISQISIIEGGKKNCSKFCTTGMDGGMAIWDIKTLE
ADLKDLKIV
NT seq
1110 nt
NT seq
+upstream
nt +downstream
nt
atgtcttaccacagcttcctgcttgagccaatcagctgtcatgcctggaataaagacagg
acccaaattgctatttgtcccaacaaccatgaggttcacatttacaagaaagaagggtcc
aagtggaacaggattcacgagttgaaggaacacagtggccatgtgacagggattggctgg
gctccagagagcaatcgaattgtgacctgtggcactgaccgtaatgcctatgtctggacc
ctgaagggaaatgtttggaagcctactcttgttattttaagaatcaaccgtgctgcccgc
tgtgtgaagtggtcaccaaaggagaacaagtttgcggtgggcagtggatcacgagtgatt
tctgtctgctattttgagcaggataacgattggtgggtttgtaaacacatcaagaaaccc
attcgttccactgtgctgaatctggattggcatcccaataacgttctgttggctgctgga
tcctctgacttcaaatgcagggttttctctgcctacattaaggaggttgaggagaaaccg
tcacccacaccatggggttcaaagatgccatttggagagctgttgttcgagtccagtgga
actggaggctgggttcacggagtctgtttctcagacagtgggaaccgcttggtctgggtc
agccatgatagcactgtgtgtgtcaccgatgccaacaagaagtcaatgattgctaccctt
gacacagcatctctacctctcctgactgttacatttatcacagagaacagtttagtcgca
gcaggtcacgactgctacccagtgctgttcacttatgacagcagcaaagacacagtgacg
ttcagcaagaaactggacattcccaaacagaaggtgcaaggtggaatgacagctttggca
aagttcaggaacctggacaaaaccgcctcagctgataacaccaccaccagcctggagacc
ctgcacaagaacagcatcagccaaatttccattattgagggtggaaagaagaactgttct
aagttttgtaccactggtatggatggtggaatggcaatctgggatattaagacgctggaa
gctgatttgaaagatttgaagattgtctga
DBGET
integrated database retrieval system
