Chiloscyllium plagiosum (whitespotted bambooshark): 122560891
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Entry
122560891 CDS
T08871
Name
(RefSeq) eukaryotic peptide chain release factor GTP-binding subunit ERF3A
KO
K03267
peptide chain release factor subunit 3
Organism
cpla
Chiloscyllium plagiosum (whitespotted bambooshark)
Pathway
cpla03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
cpla00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
122560891
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cpla03019
]
122560891
03012 Translation factors [BR:
cpla03012
]
122560891
Messenger RNA biogenesis [BR:
cpla03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Surveillance complex
122560891
Translation factors [BR:
cpla03012
]
Eukaryotic type
Release factors
122560891
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GTP_EFTU
GTP-eEF1A_C
GTP_EFTU_D3
GTP_EFTU_D2
PAM2
MMR_HSR1
Motif
Other DBs
NCBI-GeneID:
122560891
NCBI-ProteinID:
XP_043568049
LinkDB
All DBs
Position
21:54407759..54458227
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AA seq
574 aa
AA seq
DB search
MDSKDVADYAPDSWELAADTDVEAQMNSSFSRLNVNAKPFVPNVHAAEFVPSFLRSSDEA
GETLEGSDATDASMEVSESAAPVENGDTEAGSEESWDQKAEPSEAEPGGGPAGDGGPPLV
TPVGMEEEEDVSMPTVAVVVEPGAPRKEHVNVVFIGHVDAGKSTIGGQIMYLTGMVDKRT
LEKYEREAKEKNRETWYLSWALDTNQEERDKGKTVEVGRAYFETQKKHFTILDAPGHKSF
VPNMIGGASQADLAVLVISARKGEFETGFEKGGQTREHAMLAKTAGVKHLIVLINKMDDP
TVAWSQDRYEECKEKLVPFLKKVGFNPKKDIHFMPCSGLTGANLKERAENCSWYTGLPFI
PYLDNLPHFYRASTGPVRVPIVDKYKDMGTVVLGKLESGLIGKGHQLVMMPNKHNVEVLG
LLSDDVETETADPGENLKIRLKGIEEEEILPGFILCDHGSLCHSGRTFDAQIVIIEHKSI
ICPGYNAVLHIHTCIEEVQIAALICLVDKKSGEKSKTRPRFVKQDQVCIARLRTAGTICL
ETFKDFPQMGRFTLRDEGKTIAIGKVLKLIPEKD
NT seq
1725 nt
NT seq
+upstream
nt +downstream
nt
atggattcgaaagacgtggcggattacgccccggattcctgggagctggcggccgacacg
gatgttgaggcccagatgaattcctccttctcccggctcaatgtgaacgccaaaccgttc
gtccccaatgtgcacgcagcggagtttgtaccctccttcctgaggagctcagacgaggcc
ggggagacgctagaagggtcagatgcaacagatgccagcatggaagtctctgagtcagct
gcgccggtagaaaatggcgatacagaagcaggatctgaagagtcatgggatcaaaaagca
gagccaagtgaagcagaaccaggaggtggtcctgctggcgatggtgggccacctttggtg
actccagtaggaatggaagaggaggaagatgtgtctatgcccacggttgcagtggtggta
gaaccaggtgctccaaggaaggaacatgtaaatgttgtattcattggtcatgtagatgct
ggaaaatccactattggtggccagataatgtacctcacaggtatggttgacaaacgaaca
ctggagaagtatgagagggaggccaaggaaaaaaacagagaaacatggtatctttcctgg
gctttggacactaaccaggaggagagagacaagggtaaaacagtagaagtgggccgtgca
tattttgaaacacagaagaagcacttcaccattttagatgctccaggtcacaaaagcttt
gtaccgaatatgattggtggggcatctcaagctgacctcgctgtcttggttatatcagcc
aggaaaggtgaatttgaaacaggctttgagaaaggaggtcaaacacgagaacatgctatg
ttagcaaaaacagcaggagtgaaacatctgatagttcttatcaacaaaatggatgatcca
acagtagcctggagccaagatcgatatgaggaatgcaaggaaaaacttgtgccatttttg
aagaaagttggtttcaatcctaaaaaggatattcactttatgccttgttctggactaact
ggtgcaaacttaaaagaacgagctgagaactgctcttggtacactggattaccatttatt
ccctatctggacaatttaccacacttctatagggcatctactggacccgtgcgagtaccc
attgtagataaatataaggatatgggtactgtggttctcggtaaactagaatctggatta
attggaaaaggacaccaacttgtcatgatgccaaataaacacaatgttgaagttctgggt
ctcctgtctgatgatgtagaaactgaaactgcagacccaggtgaaaatctaaagatacga
ctgaaaggtattgaagaggaggagatactgccaggattcatcctgtgtgatcatggcagc
ctttgccactcaggacgtacttttgatgctcagatagttataattgaacataaatccatc
atctgcccaggttacaatgcagtgctgcacattcatacttgcattgaagaggtgcagatt
gcggccttaatctgcctggtagataagaagtctggagaaaagagcaagacacggcctcgt
tttgttaaacaggatcaggtttgcattgctcgtctaagaacagctggaactatctgcctt
gagaccttcaaagatttccctcaaatggggcgctttaccttgagagacgaaggtaaaact
attgcaattgggaaggtccttaagctgatcccagaaaaggattga
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