Chiloscyllium plagiosum (whitespotted bambooshark): 122560914
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Entry
122560914 CDS
T08871
Symbol
vps35l
Name
(RefSeq) VPS35 endosomal protein-sorting factor-like isoform X1
KO
K25731
VPS35 endosomal protein-sorting factor-like
Organism
cpla
Chiloscyllium plagiosum (whitespotted bambooshark)
Brite
KEGG Orthology (KO) [BR:
cpla00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cpla04131
]
122560914 (vps35l)
Membrane trafficking [BR:
cpla04131
]
Protein recycling
Others
Retriever complex
122560914 (vps35l)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF5667
Motif
Other DBs
NCBI-GeneID:
122560914
NCBI-ProteinID:
XP_043568103
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Position
21:58300383..58454877
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AA seq
976 aa
AA seq
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MAAVLWHSRDRNYKAELKSCCFEAVPLEFGDFHPLKLITVTESKTKKIVRKGSTSSTSSS
SSSSMMDPLSSMLDGSDPLSQFVATADPLTSAVMGAGKNNANMDPGKKQRDKAEDTAVGS
DFEPWSGKRTYILTRYTTTEKLSINLFLGSEKGKATSPGSAVSEKVRTRLEELDDLEEGS
QKELLNLTQQDYINRIEELNQSLKDAWATDQKVKALKIVIQCSKLLSDTTVIQFYPSKFV
LITDILDTFGKLVYERILSMCGSSRVSLPGNPVPDTFGPDEVNETAKETCLNWFFKIASI
RELISRFYVEVAILKCNTFLSKTGISETLPRLTSMIRGIGDPLVAIYARAYLCRVGMEVA
PHLKDNLNKNFFDFLSTFKQIHGETVQNQLAVQRVEIPVYLTLYSPAIDWILQCIAYRAP
ETLLTEMMDRCKKLGNNALLLNSVMSAFKPEFIAARSMDFIGMIKDCEESGFPKHLLFQS
LGLNLALADPPENDRLQILNEAWKVITKLKNPQDYVNCAEVWIEYTCKHFSKREVNTVLS
DVIKHLTPDRAFEDAYPQLQSIIAKVLDQFHDFAVLFSMEKFLPFLDMFQKECVKVEVCK
SIMNVFIRQQQELTRDPVILNALMHICKTMHDSVNALTLEDEKRSLAILISGFIRMVSFG
RDFEQQLSFYVEARSTFCNLEPVLIQLIHSVNQLAMETKKVMKGNHSRKTAAFVRACAAY
CFITIPSLTSIFARLNLYLLSGQTALANQCLSQADAFFKAAISLVVEVPKMINIDGKMRT
SEGFLLEFLNNFFSTLLIVPDHPEQGVLYLVRGLLNVIQDYIWEDHSDSKVRIYINVLHL
LAAASQETYLYHVEKVDSNDNLYGSDPKFLAEINKLAETLIGQILDHLKTLGKDETLKRQ
SALALSLFNSILTHGDLQNHKLNQLTINLWNLAQKHGFADTKIMVRTLEHIKRQSKQPSM
SHFADLMLRLPLQSRT
NT seq
2931 nt
NT seq
+upstream
nt +downstream
nt
atggctgctgtgttgtggcactccagagacaggaattacaaagcagagttaaagtcgtgc
tgcttcgaggctgtacctctcgaatttggtgacttccatcctctgaaacttattacagtc
actgagtcaaagactaagaaaatagtgcgtaaaggaagtacttcttctacatcatcttca
tcctccagttcgatgatggaccctctgagcagcatgctggatgggagtgatcctctgtca
cagtttgttgcaacagcagatcctctgacgtctgcagtcatgggagcaggaaaaaacaat
gccaacatggatcctggtaagaaacaacgtgacaaagcagaggacacagcagttgggagt
gactttgagccatggtctggaaaacgcacctatatacttacacggtacacgactacagaa
aaactttccattaatttatttctgggatctgagaaaggtaaagccacaagtcctggatct
gctgtttcagaaaaagtgaggactcgtttagaagagttggatgacctggaggagggatct
cagaaagagctgttaaacttgacacagcaggattacataaacaggattgaagaattaaat
cagtcactaaaagacgcatgggctacagatcaaaaagtgaaagcactgaaaatagttata
cagtgctcaaagctgctgtccgatactaccgtgatccagttttacccaagcaaatttgtt
ttgatcactgatattttggatacctttggtaaactagtgtacgaaaggattttatccatg
tgtggaagtagtcgtgtttcccttcctggaaaccctgtaccagatacctttggtccagat
gaagtgaatgaaactgcgaaagaaacttgtttgaactggttcttcaagattgcctcaatc
agggagctcatttccagattttatgtggaggtggccatattaaaatgtaatacattcctt
tctaaaactggtatctctgagactctccctcggttgacctctatgataagaggcattggt
gatccattggttgctatctatgcgagagcgtatctttgcagggttggaatggaagtggca
ccacatttgaaagacaacttgaataagaacttttttgatttcctctccacatttaaacaa
attcatggcgaaacagttcaaaaccagctcgctgtgcagcgggtggaaatcccagtctac
cttacactatattctcctgctatagactggattcttcaatgtattgcatacagagcacca
gagactttacttacagaaatgatggacagatgcaagaaacttggaaacaatgctttgctg
ttgaactcggtaatgtcagcatttaaaccggaattcattgcagcaagatctatggatttc
attggaatgataaaggactgtgaggagtctggttttcccaagcatcttcttttccaatcc
ttggggttgaacttggctttggctgatccacctgagaatgacagattgcaaattctgaat
gaagcttggaaggttattaccaaacttaagaatccacaggattatgttaactgtgctgag
gtttggatagagtatacatgcaagcatttctcaaaacgagaagttaatactgtgttatca
gatgtcattaagcatttaactccagatcgagcttttgaagatgcttacccacagcttcaa
tcaattatagcaaaagtactagatcagtttcatgactttgcggttctattttcaatggag
aagttcctccctttcctggatatgttccaaaaagagtgtgtcaaagtggaggtctgcaaa
tcaattatgaatgtttttattaggcaacagcaagaattgacccgtgaccctgtcattctt
aatgctctgatgcatatttgcaagacaatgcacgactctgtcaatgctttaacattggaa
gatgaaaaacggagtttggccattttaatcagtggatttatcagaatggtttcatttggt
cgtgactttgagcagcagctaagcttttatgtggaagcccgatcaaccttctgcaacttg
gaacctgtccttatccaattgatccatagtgtgaatcagcttgcaatggaaacaaagaaa
gtaatgaaaggcaatcattccagaaagacagcagcgtttgtgcgggcttgtgctgcatat
tgtttcattacaattccatcgctgacgagtatctttgcacgtcttaatctctacttgctc
tctggtcaaacagctcttgcaaaccagtgcctttcgcaagctgatgccttttttaaagca
gcaatcagccttgttgtggaagtaccaaaaatgataaacatagatggaaaaatgagaaca
tctgaagggtttcttctggaattccttaataacttcttttccacgttattgattgtacct
gatcatccagagcaaggtgtcttgtatttggtgagaggccttttgaatgtgatccaggac
tacatttgggaagatcattctgattcaaaagtacgaatctatataaatgttttgcatttg
ttggctgcagcaagtcaagaaacttatctttatcatgtggaaaaagtggattccaatgat
aatctctacggcagtgaccccaaattcttggctgaaattaataaacttgctgaaactctg
attggacaaatcttagaccatctcaagactcttggaaaagatgagactttgaagcgacaa
agtgctttggcgttatccttgtttaacagcatactcacccatggagatctgcaaaaccat
aaacttaatcagctgacaataaatttgtggaatcttgctcaaaaacatgggtttgctgac
accaagatcatggtgagaacattagaacacatcaaacgccaaagtaaacaaccaagcatg
agtcattttgcagatttaatgttgaggcttccactccagtcccggacctaa
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