Chiloscyllium plagiosum (whitespotted bambooshark): 122561020
Help
Entry
122561020 CDS
T08871
Symbol
jmjd1cb
Name
(RefSeq) probable JmjC domain-containing histone demethylation protein 2C
KO
K11449
jumonji domain-containing protein 1C [EC:1.14.11.-]
Organism
cpla
Chiloscyllium plagiosum (whitespotted bambooshark)
Brite
KEGG Orthology (KO) [BR:
cpla00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
cpla03036
]
122561020 (jmjd1cb)
Chromosome and associated proteins [BR:
cpla03036
]
Eukaryotic type
Histone modification proteins
Histone demethylases
122561020 (jmjd1cb)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
JmjC
FYVE
zf-C5HC2
C1_2
Motif
Other DBs
NCBI-GeneID:
122561020
NCBI-ProteinID:
XP_043568232
LinkDB
All DBs
Position
22:4501568..4563512
Genome browser
AA seq
2159 aa
AA seq
DB search
MMNSQTTSGKQNQHQQKIIRSNKRKESDSSIPDEDKIKEDKCENPVKEESSKNKIKQSVN
KRRKQEEGEKQVTLERLKTVSNSDTESSESENSSNKVILDSSSEQSSEKELENKIISDNT
KDEGKSQDDTGTEEQMEIDWSSPCDERQEVKNDNGILKSEHADTQIDPQSIEFGRQQSIK
LQEVSPRCTVKVKTTSESLSLESSSETTQKPSVQNSVSDVSNGTLPDNLLNKTVNIPSHG
LTSQNLETNLSTPMHLIVNKRTSDFQKSAAELHLNNKIITEDKSEARAFSTVKETNNRSE
KEKSANSSGQELTASYKNKPNKTNTLPDTLKPKIAYPCNPTACITKPTTRCKNDSRSSLQ
LVGSKTVMETTKSPLIVDKNERFTVYRDPALVGHDTGAKSLSPYLHPHLHPLHTSSHSSS
LTTNSSHPALRAASHHVSSSPRTSVSSSAHILSSGSPHSVHSTHHLPTVLPGVPSGPLVC
GHLDSVHVRNLNPLTLAHHQQFLQQQSSPLLGQTHPSAYNQLGLYPIIWQYPNGTQLSPG
LSMTSSKWVHPDNPLSAEASLRRNASSPWLPQHTSVSSADSLGLLSHIPVRPASAEPHRP
LKLASHSSPPLSKATVVYKKEEIDKKNVVNSKHSVTAAQTKLEFNHDRLSHGRESQLARG
FTSTAFCQSKEKRSVQEPSDSHNKYNEERRRILQESIEVARFASTIKTNEVVKDSYSRIP
SLPTDGPKSQNIKQGGETEHCARELYTSKNSLAHSMPQSNYFTTLSNSVVNEPPRLYLSK
DIIHPYAEKTNSSTPILSYNKTLSKPPPLIKHQPECEGLVGKITEQFPHQMTSQPPSTNN
NDHGRTREQLTISQSNPLKSMPSLHRAPVYHPLSHPVIERKEGNYRNLSPPTLTPVQPVN
AAKISELQKPPTLLPEPRVDGKICIHNPVVSSLDVWKTGVGNLGKPVCHLEKSGNKVAPA
SVIVRPSSIAKQEHKGNIQSNLKNSGRGSVLVQSNLIEDLNSSKVKDIWRINVPDVNLDT
TGAEHEKNFKASCSDNGTKSVVVSNSCNSMINPIAPATASKLLSSSETSITYCSSYITIT
NSVEGQIIPKTSTHFGTGTQECKINTTSAVVFSTAAARTGNTTQNNTGASSTTDYYQLKK
HKAALAMAHSASTTANNNESTSLKSVRTASSLSPNNTGIIDVSYKTSSITNGQIAQSSQP
GYHTKLKKAWLTRHSEEDKNTSKVENTETAGKDAKKLVLVNQSTSISNDVDKAGQSEEEK
TEQEGRKTRRGIKRIYESGSESDASDESENKSEHRVKRQPKPTYKKRQNDLQKRKADTER
EEEEVKPNGTLYRITKEKEKNKIKLQSDGLPRSVLKDWRKVKKLKQTGEPFLQDGSCSEI
APNLQKCRECRMVRYRKNEEFNQSAVFCRFYYFRRLAFSKNAVLRIDGFSTPDQYDDEAV
NLWLPSDSMDLDIESSKYILRNIDNTFYQIETSEKTAMSWLKRDAKVAWKRAVKGVQEMC
DACEATLFNIHWVCQKCGFVVCLDCYEARGRRGSKVDKELYVWLKCVKGQVHDTKNLMPT
QIIPSTVLTDIGDMMRSFEASWGIVPHDPSTSEQSVQLAKLYTTNGISQGVLNQNTIISM
AKQPSASENPKTNGSSTSPQNNITTEKTKELPVSKAVKVKLSQLDKTEDCKTTAVCFSNE
HGSTLRDLLTSTAEKLQFGSTDAGIAFAPVFSAGTPTGRGARSMPNLLDDIIASVVENKI
PASKSVKLCGKEETKQNLQETKKLNTQTISTNHSEVPHSWLCDGFLLWLQDPTNSNNWKI
FRECWRRDQPVLVSGVHKKLNSNIWKPESFCEEFGDQKVDLVNCKDGSIISNTKIQDFWD
GFEDLTKRIKSKNGESMLLKMKDWPSGDDFRTVMPSRFDDLMKNLPLPEYCDPEGNLNLA
SRIPSFFVRPDLGPKLYGAYGQSTIKEHGTTNLHLDIADVINVLVYVGVPKGNGNNHRAA
ILKKIEEDEIDDTTKKRLKDGDELPGALWHIFSAKDTHKIKEFLQKSHEDQGQESPDHDP
IRDQTCYLNKKLRRRLYEESGIRSWSIFQFLGDAVLIPAGALRQMQSIHSCIQVSEDFVS
PEHSMQSFHLSQELRHQSKHELNYEDKLQVKNIIYHSVKDAVGTLRMHEEKILNTSQNA
NT seq
6480 nt
NT seq
+upstream
nt +downstream
nt
atgatgaattcccagaccacatcaggaaagcagaatcagcatcagcaaaaaatcattcgt
tcaaacaaaaggaaagaatctgatagcagtataccagatgaagataagataaaggaggac
aaatgtgagaatcctgtaaaagaagaatcttcaaagaacaaaataaagcagtctgttaat
aaaaggagaaagcaagaagagggtgaaaagcaagtgactttggaaaggctgaaaacagtt
tctaactctgatactgaaagcagtgagtctgaaaactctagtaataaagtcatcttggat
tcttcctctgagcaaagttcagaaaaagaactggaaaataaaatcatttctgataacact
aaagatgaaggcaagtcccaggatgacacaggaacagaggaacagatggaaatcgattgg
tcatctccctgtgatgaaaggcaggaggtaaagaatgacaatggaatactgaagtcagaa
catgctgatacgcaaattgacccccaaagtatagagtttggtcgacaacagagtataaaa
ttgcaagaagtgagtccaaggtgcactgtaaaagtaaaaacaaccagtgaatctttgtct
ttggaatcttcatcagaaaccacacaaaaaccatctgtacagaactctgtatctgatgtc
agtaatggaactttaccagacaatctgcttaataaaactgtcaacatcccttctcatggc
cttacatctcagaacctggaaacaaacctcagtactccaatgcatttgattgtgaacaaa
cgtacttcagactttcagaaatcagcagcagagctgcatctaaataataaaattatcact
gaagacaaatctgaagctcgtgcattctcaactgttaaggaaaccaataatagatcagaa
aaggaaaaatctgctaattcctcaggacaagaactcactgcttcttacaaaaacaaacca
aataaaacgaacactttacctgatactctgaagcctaaaatcgcttatccttgcaaccca
actgcttgtatcaccaagccaacgacaagatgtaaaaatgactcaagatccagcctccaa
cttgtgggctcaaagactgttatggaaactacaaaaagccctttaattgttgataagaat
gagcgctttacagtttacagggatccagccttggttggacatgacacaggggctaaatct
ttgtctccatatttgcacccacatcttcatcctcttcatacctcatcgcattcatcttcc
ttgaccacaaatagttctcatccagccctaagagcagcatcgcatcatgtttccagttca
ccacggacttccgtgtcaagcagtgctcatattctcagtagtggctcaccccattcagtt
cactctacccaccaccttccaactgtcttaccaggagttccatcggggcctttggtgtgt
gggcatttagattctgtgcatgtaagaaatttaaatcccttaacactggctcaccatcag
cagtttttacagcaacagtcatctccgctccttggccagacccatccatctgcttataac
caacttggactctatccaataatctggcagtatccaaatggcactcagttgtctccaggg
ttgagtatgacctcatctaagtgggtccaccctgataaccctctgagtgctgaagcttct
ttgaggaggaatgcatccagtccttggctacctcagcacaccagtgtgtcctcagctgac
agtctgggattactaagccacatcccggtgcgccctgccagtgctgaacctcatcgaccc
ttgaaattggcttcacattctagtccacctctgtcaaaggcaactgtagtttataagaaa
gaagaaattgacaagaaaaatgtagttaattccaaacattctgtcactgctgctcaaacg
aagcttgaatttaaccatgatagactttcacatggacgagaaagtcagctggctagaggg
tttacaagcactgccttttgtcagagtaaggagaaaagatcagtgcaggaaccaagtgac
agtcacaataaatataacgaagagagacggcggattctgcaggagagtattgaagtcgct
cgttttgcttctacaatcaagacaaatgaagttgtgaaagattcctattccagaatacca
tctttgcctactgatggtccaaaatctcagaacataaaacaaggtggagaaacggagcat
tgtgcaagagaactttatacatcaaagaattcactagcacattctatgcctcagagcaac
tattttactactttgtcgaatagcgttgtaaatgagcctccaaggctatatctgtctaaa
gacataatacatccgtatgctgagaaaacaaattcttcaacacctattctttcatataac
aagactctgtccaaaccaccacctcttattaaacatcagcctgagtgtgagggtttagtt
ggcaaaattacagaacaatttccccaccaaatgacatctcagcctccgagcacaaataat
aacgatcatgggagaaccagagaacaattaacaatttcacagtcaaaccctctgaaaagt
atgccatctttacatagggctccagtttaccatcctctatctcatcctgttatagaacgc
aaagaaggtaattatcgcaacctatccccaccaaccctgactccagtacaacctgtgaat
gctgctaagatttctgaactccagaaacctccaactttactcccagaaccaagggttgat
gggaaaatttgtattcataatcctgtagtttcctcactagatgtctggaaaactggtgtt
ggaaaccttggtaagccagtttgtcacttagagaaaagcggcaacaaagttgctccagca
tctgttattgtaagaccatcttccattgccaagcaagaacataaaggaaatattcaaagc
aacttaaagaactctggaagaggaagtgtattagtgcaatcaaatctaatagaggacctt
aactcatcaaaagtcaaagacatatggagaatcaatgtacctgacgtgaacttggacact
acaggtgcggagcatgagaaaaactttaaagcttcatgttcagacaacggcacaaaatct
gttgttgtaagcaactcatgcaatagcatgattaaccccatagctcctgccacagcaagt
aaacttttgagtagcagtgaaacaagtataacctattgttcctcttacatcacaatcact
aacagtgtagaagggcaaattattcccaaaacttcaactcattttggaacagggacacag
gaatgtaaaattaataccacatccgctgtagttttctcaacagctgctgccagaacagga
aacactactcagaataacacaggagcctcaagtacaactgattattaccagctgaaaaag
cataaggcagcattggctatggcccattcggcgagtactactgctaataacaacgagtct
acaagccttaaaagtgtaagaactgcttcatctctttctcctaataatactggaataata
gatgtgtcttataaaacaagttctataaccaatggccagattgctcaatccagccaacct
ggttatcacacaaaacttaaaaaagcctggttgactagacactctgaagaagacaaaaat
acaagtaaagtggaaaatacagaaacggcaggaaaagatgccaaaaagctagttttggtt
aatcaatcaacttccatatcaaatgatgttgacaaagcaggtcaatctgaggaagaaaaa
actgagcaggaagggcgaaaaacaagaagaggaataaaaagaatatatgaatctggatct
gaaagtgatgcttcagatgaaagtgaaaataaatctgagcatagggtcaagcgtcaacct
aagccaacttataaaaagaggcaaaatgacttgcaaaaacgaaaagctgatactgagaga
gaagaggaagaagtcaaacctaatggtactttatacagaattacaaaggaaaaggagaag
aataaaattaaactccagagtgatggtttaccacggtcagtgttgaaggattggcggaaa
gttaagaaacttaaacaaactggagaaccttttctgcaagatggctcatgctctgagata
gcaccaaatcttcaaaagtgtagagaatgtcgtatggtacgttacaggaaaaatgaggag
ttcaatcagtcagcagtattctgcagattctactatttccgccgactggcattcagtaag
aatgcagtattaaggatagatggattttcaactccagatcagtacgatgatgaagcagta
aacctgtggttacccagtgattccatggatttggacatagaatcttccaaatacattttg
agaaatattgataatactttttatcaaatagaaacatctgagaagactgctatgagttgg
cttaaacgcgatgccaaagtagcctggaagagagcagtaaaaggagttcaggaaatgtgt
gatgcatgtgaagccacattgtttaacatccattgggtttgccagaaatgtggatttgtg
gtctgtttggactgctatgaagcaaggggaagaaggggttctaaagtcgataaggaactc
tatgtctggttgaagtgtgtcaaaggccaagttcatgatacaaagaacctgatgcccacg
cagattatcccaagcactgtcttaacagatattggagacatgatgcgttcttttgaagct
agctggggaattgttccacatgatccctctactagtgaacaaagtgtacaacttgccaaa
ctctacacaactaatgggatttcacagggtgtcctaaatcagaataccattatctcaatg
gctaaacaaccctctgcaagtgaaaatccaaagaccaatggcagctccaccagccctcag
aacaacatcactactgaaaaaaccaaagaactacctgtgtccaaggcagtgaaggttaaa
ttaagccagcttgataaaacggaagattgcaaaactactgctgtgtgtttcagtaatgaa
catggctcaactctacgagatttgcttacctcaacagctgaaaaattgcagtttggctca
actgatgctggcattgcctttgccccagtcttctctgcaggaacccctactgggagagga
gcaagaagcatgccaaacctcttggatgacataattgcatcggtagtggaaaataagatt
ccagcaagtaaatcagtgaaattatgtggaaaagaagaaacaaagcagaatttacaagaa
accaaaaaactcaacacacaaacaatcagcacaaatcattctgaagtaccacattcttgg
ctttgtgatgggtttttactctggctccaagatcctacaaattccaacaattggaagata
ttcagggaatgctggagacgtgaccagcctgttcttgtatctggtgtgcacaaaaaacta
aattccaacatttggaaacctgaaagcttttgtgaggaatttggagaccagaaggttgac
ctagttaactgcaaagatggcagtataatctccaacacaaaaattcaagacttctgggat
ggttttgaagatttaacgaaacgaatcaaatctaaaaatggggaatccatgttactgaag
atgaaggattggccctctggtgatgatttcagaactgtgatgccttccaggtttgatgat
cttatgaaaaatttgccactaccagagtattgtgatccagaaggaaatctgaacttggca
tcccgaatcccaagtttctttgtacgaccagatttggggccaaaactatatggtgcttat
gggcaatcaaccattaaggaacatggaacgaccaatctccacctagacattgctgatgta
atcaatgtgcttgtttatgttggtgtgccaaaaggaaatgggaacaatcacagagcagct
atcttgaaaaaaattgaggaagatgaaattgatgacaccacaaagaaacgattgaaggat
ggggacgagcttccaggtgctttgtggcacatcttttcagccaaagatacccacaaaatt
aaggaatttctacaaaagagtcatgaggatcagggtcaggaatcacccgaccatgatccg
atccgcgatcagacctgttacctaaataagaaactgcgccgaagactctatgaagaaagt
ggaatacgcagctggtccatcttccagttcttgggtgatgcagtcttaataccagcagga
gcacttcgtcagatgcaaagtattcacagttgcattcaggtctctgaggactttgtatca
ccagaacattcgatgcaatctttccatctctcacaggaactgaggcaccagtcaaaacat
gagctaaactatgaggataaactgcaggtaaaaaacataatataccattcagttaaagat
gctgtgggaaccctgagaatgcatgaagaaaagatattgaatacatcacagaatgcttaa
DBGET
integrated database retrieval system
