Chiloscyllium plagiosum (whitespotted bambooshark): 122561026
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Entry
122561026 CDS
T08871
Symbol
arid5b
Name
(RefSeq) AT-rich interactive domain-containing protein 5B isoform X1
KO
K25857
AT-rich interactive domain-containing protein 5
Organism
cpla
Chiloscyllium plagiosum (whitespotted bambooshark)
Brite
KEGG Orthology (KO) [BR:
cpla00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cpla03000
]
122561026 (arid5b)
Transcription factors [BR:
cpla03000
]
Eukaryotic type
Helix-turn-helix
ARID
122561026 (arid5b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ARID
Motif
Other DBs
NCBI-GeneID:
122561026
NCBI-ProteinID:
XP_043568247
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All DBs
Position
22:complement(5325697..5450956)
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AA seq
1203 aa
AA seq
DB search
MEPDSVKWVGSPCGLHGAYIFYKAFKFSLEGRPRILSLGDFFFVRCKPGAPICIAELQLL
WEERNNKQLLSSSKLYFLPEDTPKGRSIGHGEDEVVAVSEKVVVKLDDLMKWACSDFGTW
TRGLGAVSLKPSMRKELGMNGQKEALNQYRHCTLNSGLNFKDVLKEKADLDADDDGGDVD
GTKIIVLSYPQYCRYRTMLKRIQNRSSSWLVNEFVMALGGIAILNGSTRILYCRDTFDHP
TLIENESVCDEFAPNLKGRPRKKKPPSQKRDTQALNGLRDSNEDSDGKASAKAKCEPKAT
MVKPKNNSSNCKNPPADEKSEVAADEECRAEEQTFLVTLYKYMKERNTPIERIPYLGFKQ
INLWTMFQAAQTLGGYEAITARRQWKQIYDELGGNPGSTSAATCTRRHYERLILPYERYI
KGEEDKPLPPVKPRKQESSPPESESKVRAAATKRKTEPNRKVKRERDVVQKVKECSEAIA
ATESSQEMDKWRADVALPRDGVVTQTETGEKDQDRCDISEGSDSRGTQAKDKVSKANSDQ
SNRKEAELLSLHKGLTAHLIDVTAQSQAESKASLASCQDHESPQQPMDRPANDVQEKVAG
TVAMTEKDTEKGYLSDQGSNVVSPGAANSSIHSDQSPKDEVENWAGGIQSESIQRMPPGQ
VGKGNLNPLPGPLKDKEELLVTTKTEACPSYLPLVYSRGHPGIMSPLAKKKFLSQVSGGL
PNNNPIGAPPPLISTKKCGEDGEEMVTAESNFLQGSTPEQLAINRPSVIQHAHSFQKRNT
DERGGTLKHDGLNKLSDSEAAYLSKHHLNCSESFKSCASYPFTADTIDNENKGSEKKGCQ
PSQVSSFLADFYSSPHLHNLYRHTEHHLVNDHTSKYLNTVMKDKGSSFVQNKNQDAVYLR
HLSTLHRSEKKCAVKPPTEEQPTDLSLPKLKKTLPKSSLNSVIHLPSPLDIKSTTASTQP
AHTDCNPKACRVPPMPIPTSTNSGEVALPPSTKLEEAVRPAISSKGGSQIIGSSKPIKRN
REGMDNGSSQSPDKKLRAVSPMPLAKELALREKPSDLEGESSKNQGPGIILEGHKFPLPT
PIFPGVYPGAFVSQVQDMCDGLGSAFPVDYAHPLQYLKNQAVLSPLMQPLAIHSFMIPAM
QRQILASTGASPQLYRHLSAAAAPVAASYGDLLHHSLYPLASLNPQVAYSTSPISSLHPS
TKL
NT seq
3612 nt
NT seq
+upstream
nt +downstream
nt
atggagccggactcagtcaagtgggttggatctccgtgcggtttacacggagcctacatt
ttctacaaagctttcaaattcagtcttgaaggcagaccacgaatcctctccctcggagac
tttttctttgtaagatgtaagccaggagctccgatttgcatagcagaactccaactgttg
tgggaagagagaaacaacaagcaacttctgtcgagttccaaactctactttctcccagaa
gatacacccaagggcaggtcgatcggccacggagaggatgaagttgttgctgtatcggag
aaagtcgttgtgaagttggatgacctgatgaaatgggcgtgctcagatttcggcacatgg
acacggggcctgggggctgtgtcactgaaaccgtcgatgagaaaggaactgggtatgaat
ggacaaaaagaagccttgaatcagtatcggcattgcaccctgaacagtggcctcaatttc
aaggatgtgttaaaagaaaaggctgatcttgatgctgatgatgatggtggtgatgttgat
ggcaccaaaatcattgtcctcagttacccccagtactgccgctatcggactatgctgaag
agaattcaaaaccgatcgtcgtcttggctggtcaatgaatttgtaatggccctgggtggc
attgcgatattaaatggaagtacccggatcctctactgccgtgacacatttgatcatccg
actctgattgaaaatgagagcgtttgcgatgagtttgcaccaaatctcaaagggcgccca
cggaagaagaaacccccctcccagaagcgggacacccaagctctgaatggcctgagagat
tccaacgaggattcggatggaaaagccagtgccaaagcaaaatgtgagcccaaagccacg
atggtgaaacccaagaataacagcagcaactgcaaaaatcccccggctgatgagaaatcc
gaggttgcagctgatgaagaatgcagagctgaggagcaaacattcctcgtcacactttac
aaatacatgaaggaaagaaatacgccaatagaacggataccgtacctcggatttaaacag
attaacctttggaccatgtttcaagcagctcaaactctcggaggatatgaagcgataact
gctcgtcgacagtggaagcagatatatgatgaattgggcggcaatcctggcagtaccagt
gcagcaacgtgtactcgcaggcattatgaaaggctgatcttgccatatgaaagatatatc
aaaggggaggaggacaagcctttgcctccagtcaagcctcggaagcaagagagcagccct
cctgagagcgagagcaaggtgagggcagctgcaaccaaacggaagacagaaccaaatcga
aaagtgaaaagagaacgagacgttgttcagaaagtgaaagagtgttctgaggcaattgca
gccacagagagcagccaagagatggacaaatggagagcagacgtggccttgccaagggat
ggagtggtaacacagactgagactggagagaaggaccaggacaggtgtgatatctccgaa
ggttcagacagcagagggacccaggccaaggacaaagtcagcaaggcaaacagtgaccag
tcaaacagaaaggaggctgagctgctatctttgcacaagggccttacagcccatttgata
gatgtgacagcacagagccaggcagaaagcaaggccagcttggcatcctgtcaggatcac
gagtcgccgcaacagccaatggacaggccggcaaacgacgtccaggagaaagtcgctgga
acggtagccatgacggagaaagatacggagaaaggatacctgtctgatcagggttcaaac
gtggtgtcgccaggagctgccaacagctccattcattctgatcagtcaccaaaggatgag
gttgagaattgggcggggggcatccaatcagagagcatacagagaatgccacctgggcag
gtggggaagggtaacctgaatcctttgcctgggcccctcaaagataaggaggagctgctt
gttacaacaaaaactgaggcttgccccagctatctgcccctggtctactccaggggtcac
cctggcatcatgtcaccactcgccaagaagaagttcttgtctcaggtcagcgggggtttg
cccaataacaatccaattggagccccacctccgctgattagtactaaaaaatgtggtgag
gatggtgaagaaatggttacagcggagagtaattttttacaaggctccacgccagaacag
ttggctatcaatcgaccttctgtgattcaacatgcacatagttttcaaaagagaaatact
gatgagcgaggggggacattgaaacatgatggtttgaataaattgtctgattctgaggca
gcttatctttcgaagcatcaccttaattgctcagaatcattcaaaagctgcgcttcttac
cctttcaccgctgatactatagacaatgaaaataaaggttctgagaagaaaggttgccaa
ccatcacaagtgtcaagttttctagcagacttctactcctccccccacctacacaatctt
tacagacacacagaacatcatcttgttaatgaccacacatcaaaatacctgaacacggtc
atgaaggataaaggttcttcgtttgtgcagaataaaaaccaggatgctgtctatttaagg
catctttcaacactgcaccggtcagaaaagaaatgtgcagtgaaacctcctacagaagag
cagcccactgacttgagtcttccaaagttaaagaaaacgctacccaagagctcattaaac
agtgtcattcatttaccatcgccactagacatcaagagcacaacagcaagtacacagcca
gcccacactgactgcaatcccaaagcttgccgtgtccctccaatgccaataccgaccagc
accaacagtggtgaagttgccctgcccccctcaacaaagctggaggaagcggtcagaccg
gcgatcagctccaaaggaggttcacagatcattggaagctctaaacccatcaagaggaac
cgagagggcatggacaatggcagcagccagagcccagacaaaaaactccgggctgtctcc
cccatgccactggcaaaggagctggccttgagggaaaagccatctgacttggaaggggag
agcagcaaaaaccagggtcccgggattatcctagagggccacaagtttccattgccgacc
ccgatattcccaggcgtgtatcctggagcctttgtatctcaggttcaagatatgtgcgat
ggcctgggctcagcatttccagttgactatgcccatcctttacaatacttgaagaatcag
gctgtgctgtctccactcatgcaaccattggccatccattccttcatgattccggcgatg
cagagacagatccttgcttcaaccggtgcctccccacaactgtatagacatctatccgca
gctgctgccccagtcgcagcgtcatatggagatcttttgcaccatagcctttatccttta
gcttctctgaacccacaggtcgcctattccacatcaccaatatcttctctacatcccagc
acaaaattataa
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