Chiloscyllium plagiosum (whitespotted bambooshark): 122561028
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Entry
122561028 CDS
T08871
Symbol
rhobtb1
Name
(RefSeq) rho-related BTB domain-containing protein 1 isoform X1
KO
K07868
Rho-related BTB domain-containing protein 1/2
Organism
cpla
Chiloscyllium plagiosum (whitespotted bambooshark)
Pathway
cpla04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
cpla00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
122561028 (rhobtb1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cpla04121
]
122561028 (rhobtb1)
09183 Protein families: signaling and cellular processes
04031 GTP-binding proteins [BR:
cpla04031
]
122561028 (rhobtb1)
Ubiquitin system [BR:
cpla04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul3 complex
Adoptor and target recognizing subunit (BTB)
122561028 (rhobtb1)
GTP-binding proteins [BR:
cpla04031
]
Small (monomeric) G-proteins
Rho Family
RhoBTB
122561028 (rhobtb1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BTB
Ras
Roc
iSirtuin
Motif
Other DBs
NCBI-GeneID:
122561028
NCBI-ProteinID:
XP_043568253
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All DBs
Position
22:5800222..5887003
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AA seq
699 aa
AA seq
DB search
MDTAMDYERPNVETIKCVVVGDNAVGKTRLICARACNTTLTQYQLLSTHVPTVWAIDQYR
VCQEVLERSRDVVDEVSISLRLWDTFGDHHKDRRFAYGRSDVVVLCFSIANPNSLNHVRT
MWFPEIKHFCPRTPVVLVGCQLDLRYADLEAVNRARRPLARPIRPNDILPPEKGREVAKE
LGIPYYETSVFDQFGIKDVFDNAVRGALISRRHLQFWKSHLKKVQKPLLQAPFLPPKPPP
PVMKIPDNPVSAFKPSHLLDNPLCADVMFILQNQVKIYAHKVYLATSSSKFYDLFLLDLT
AESQIHSEKNEKQVKLGQDHLMRTSSLDTDGDNCEISVGSTPSILRTSKSDSTLKMNIHE
DESSEMKGTPSGRSLSSWSKAFNHIHEEDLENPVMKRRGLMTVVKMDHSIQPGPFEAVLR
FLYTGQLDENEKDLMRIAQIAELLEVFDLRMMVENIQNKEAFMNQEITKAFHVRKANRIK
ECLAKGTFSDVMLKLEDGSINGHKSLLISSCEWMAAMFGGSFLESSNKEVYFPTTSKACM
QAVLEYLYTSQFSFSSKLDPIELIVLANRLCLPRFVALTEQYAVQELLKSVKEGDDIDGE
VLTYLELAQFHNAHQLAAWCLHHICTSYNSVCCKFRKEIKAISPENQEYFEKHRWPPVWY
LKEEDHYQRVKKEREKDEVAFHKHHSKRRWCFWHHSAVA
NT seq
2100 nt
NT seq
+upstream
nt +downstream
nt
atggacactgctatggattatgaaaggccaaatgttgaaactatcaagtgtgttgttgtt
ggagacaatgctgtgggaaagacacgactcatctgtgcaagagcatgcaataccacctta
acacagtaccagttgctgtccactcacgttcctactgtctgggcgattgaccagtatcgt
gtttgtcaagaggtgcttgaacgttcccgagatgttgtagatgaagtaagcatatctctc
aggctgtgggatacatttggtgaccaccataaggacaggcgttttgcatatggcaggtct
gatgtggtggtcctgtgcttctcaattgctaaccccaattcacttaaccatgtgagaaca
atgtggtttcctgaaatcaagcatttttgtccacgaacacctgttgtcttagttggctgt
cagttggacttgcgttatgctgatcttgaggctgtaaatcgtgcacgccgccccttagca
agaccaataagacccaatgacattttacctcctgaaaagggccgagaagtagccaaagaa
cttggaattccctattatgaaacaagtgtgtttgatcagtttggcatcaaggatgtattt
gataatgctgtcagaggtgcactgatttctaggcgacatcttcagttctggaaatctcat
ttaaagaaggtgcagaagcctttactgcaggcaccattcctaccacctaaaccaccacct
ccagtaatgaaaattccagataatccagtgagtgcttttaaacccagccatctgctcgac
aatccactgtgtgctgatgttatgtttatactccagaaccaggtgaaaatctatgctcac
aaggtatacctggctacctcatcatcaaaattttatgacctgtttttgttggatctaact
gctgaatctcagatacacagtgagaaaaatgagaaacaagtaaaactaggccaagaccat
ttgatgaggacttcaagccttgacacagatggcgacaattgtgagatcagtgttggttct
acaccatccattctgagaacatctaagagtgatagcactttgaaaatgaatatacacgag
gatgaatcttcagaaatgaagggaacaccatcaggaagatcactgtcttcgtggagcaaa
gcctttaaccatattcatgaagaagacctggagaaccctgtaatgaagaggaggggtctc
atgacagttgttaagatggaccattcaatccagccagggcctttcgaagctgttttacga
tttctctacacaggacagctggatgaaaatgagaaagatctgatgaggattgcacaaata
gcagaacttttggaagtttttgatttacgtatgatggttgaaaatattcaaaataaagaa
gcctttatgaatcaggagatcacaaaagcatttcatgtcaggaaagcaaaccgaataaag
gaatgcttagcaaaaggaacattttctgatgtaatgcttaaattagaagatgggagtatt
aatggccacaagtctttgttgatttctagctgcgaatggatggcagctatgtttggaggg
tcttttctggagagctcaaataaagaggtttactttcccaccacaagcaaggcttgcatg
caagcagttctagagtacctgtacaccagccaattctcgttcagttcaaagcttgacccg
attgagctgattgtcttggcaaacagactgtgccttccacgttttgtggctctgacagaa
caatatgctgtgcaggagttgttgaaatctgtaaaagaaggtgatgatattgatggggaa
gtgttgacgtacttggaactagcacaatttcataatgcacatcaactggcagcttggtgt
ttgcatcacatttgtacaagctacaacagtgtttgctgtaagttcaggaaagagataaaa
gcaatatcccctgaaaaccaagaatattttgaaaagcaccgttggccacctgtgtggtac
cttaaagaagaggaccattaccagcgagtgaaaaaggagcgcgagaaggatgaggttgct
ttccacaagcatcactcaaaacgcaggtggtgcttctggcaccattctgcagttgcctaa
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