Chiloscyllium plagiosum (whitespotted bambooshark): 122561065
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Entry
122561065 CDS
T08871
Name
(RefSeq) interferon-induced protein with tetratricopeptide repeats 5-like
KO
K24850
interferon-induced protein with tetratricopeptide repeats 5
Organism
cpla
Chiloscyllium plagiosum (whitespotted bambooshark)
Brite
KEGG Orthology (KO) [BR:
cpla00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
cpla03016
]
122561065
Transfer RNA biogenesis [BR:
cpla03016
]
Eukaryotic type
tRNA degradation factors
Other tRNA degradation factors
122561065
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TPR_19
TPR_14
TPR_17
TPR_12
TPR_2
TPR_8
TPR_1
TPR_11
TPR_CcmH_CycH
TPR_16
TPR_10
RMD1-3
TPR_Slam
ARM_TT21
CFAP70_TPR_C
TPR_15
CFAP70_mid_TPR
TPR_6
TPR_Psidin_N
TPR_7
ANAPC3
TPR_MalT
TPR_9
NatA_aux_su
TPR_YpiA_C
TPR-S
HAT_PRP39_C
Suf
TAtT
TOM20_plant
PRP6_TPR
DUF1512
Motif
Other DBs
NCBI-GeneID:
122561065
NCBI-ProteinID:
XP_043568360
LinkDB
All DBs
Position
22:13242005..13247451
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AA seq
466 aa
AA seq
DB search
MGDTEKDLLKVNLDQLQCHFTWTPQKENIDLDDMKQRLEDSIQLDVKYQARSYNHLAFIN
CLQGNCEEAIQNLKEAERILRERHGDDFEKRILVTYGNYVWVYYHMDRLEEAQSYLDKLE
TVCKLFPEASRFTAMIPELYGEKGWSLLTTAAQYYEEAKECFTKALEEDPDNIEWNVGYA
TALSRLEWFSVIPESHEPTESMKQFRRVLELDPDHAESMVQLALKLQEFNQKEEASTLVE
RALQRSPGHPYVLRYAAKFYRKQGDVENAVKLLEKALKITPNSSFLYHQIGQCQQIKLFA
LLKGPGSKLQEKEALIKQCKQYFGKAVELKPSFISAKLAFAAICSINKEYCEAKEIYSNL
LKLQSICPEDKQEIYYKAGLFELHSKEESKAITLLLEGFSIKCNSYLQKCFQTNLEKIAK
RRLQNNPGDLKALCILGVMYLLDGEVSGIRQHFAKIKLQELFNEEQ
NT seq
1401 nt
NT seq
+upstream
nt +downstream
nt
atgggtgatacagagaaagatttgttgaaagtgaatctcgatcagcttcaatgtcacttc
acgtggactccacagaaagaaaacatcgacttggatgatatgaaacaaagattagaagat
tcaatacaacttgacgtgaaatatcaagccaggtcttacaaccatcttgcctttataaac
tgtctgcaaggaaactgtgaagaggcaattcagaatttaaaggaagctgaaaggattctg
agggagagacatggagatgattttgagaaaaggatcttggtcacctatggaaactatgtc
tgggtttattatcacatggaccgactggaggaggctcagtcctacctcgacaagctggag
acagtctgtaaactatttcctgaagcctctcggtttacagcaatgatacctgagctttac
ggggagaagggctggtcactgttgactacagctgctcaatattatgaagaggcaaaggaa
tgttttacaaaggccctggaggaagatcctgacaacattgagtggaatgttggctatgcc
actgcactgtcccgtctggaatggttttctgttatcccagagagtcatgaacccactgaa
tcaatgaaacagtttagacgtgtgctggagctagatcctgatcatgctgaatccatggtg
cagttagctttaaaactacaggaattcaatcaaaaggaggaagcatccacattagttgag
cgagcgttgcagaggtcccctggtcatccatatgtgcttcgatacgcagcaaagttttac
aggaaacaaggagatgtagaaaatgctgtcaagctgttagagaaagcattaaaaattaca
ccaaactcatcatttttataccatcaaataggtcagtgccagcaaattaaattatttgca
ctgctgaaaggtccaggcagcaaacttcaagagaaagaagcattgattaaacaatgtaag
cagtattttgggaaggcagttgaactgaagccatcctttatatctgcaaaattggctttt
gcagctatctgctcaataaataaagaatattgtgaagctaaggagatctacagtaatcta
ctgaaattgcaatcaatttgtccagaagataagcaagaaatatattataaggctgggcta
tttgaacttcattctaaagaagaatcaaaagctatcacacttttgctagaaggattttca
atcaaatgtaactcatatctacaaaaatgctttcagaccaacttggagaagatcgcaaag
agacgacttcaaaataacccaggtgatcttaaggctttgtgtattcttggggtcatgtat
ctgctggatggggaagtgtctggaattcgtcaacactttgcgaagatcaaactccaagaa
cttttcaatgaagaacagtga
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