Chiloscyllium plagiosum (whitespotted bambooshark): 122561066
Help
Entry
122561066 CDS
T08871
Name
(RefSeq) interferon-induced protein with tetratricopeptide repeats 5-like isoform X1
KO
K24850
interferon-induced protein with tetratricopeptide repeats 5
Organism
cpla
Chiloscyllium plagiosum (whitespotted bambooshark)
Brite
KEGG Orthology (KO) [BR:
cpla00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
cpla03016
]
122561066
Transfer RNA biogenesis [BR:
cpla03016
]
Eukaryotic type
tRNA degradation factors
Other tRNA degradation factors
122561066
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TPR_2
TPR_8
TPR_12
TPR_1
TPR_14
TPR_11
TPR_17
TPR_19
TPR_10
TPR_CcmH_CycH
TPR_15
ANAPC3
TPR_7
TPR_MalT
NatA_aux_su
Suf
ARM_TT21_5th
ARM_TT21_C
ANAPC5
Motif
Other DBs
NCBI-GeneID:
122561066
NCBI-ProteinID:
XP_043568361
LinkDB
All DBs
Position
22:13275182..13280856
Genome browser
AA seq
499 aa
AA seq
DB search
MQSLSQCSNTWKDSWKPKLGQLQCHFTWTPLKENIDLDDMKHRLEDLIQAGVKYQAMSYN
HLAFIHCLLGNCEEAIQNLKEAERILRERHGDEFEKRILVTYGNYVWVYYHMDRLEEAQS
YLDKLEAVCKLFPEASRFTAMIPELYGEKGWSLLRSSRKYYEESKECFKKALEEDPDNTE
WIVGYATVLSRLEVFSGTTAHHQPRESVKWFRRVLELDPDDSVSMVMLALKLQEFKQKEE
ACVLVERALQKSPDLLYVLRYAAKFLRKEGDLERSLELLKKGLKIAPESAFLHHQAGLCY
KTKLMPLIKNPHLKNLHKLSSQQVTKLINQCKHHFKKASENRPLTFVIAKLDYAIICSLN
KEYLKVEEIFSNLLKSEQIHPDDKQSVYLQAGLFEMHHKRSESNAIAHFLEGLKLKRDSL
EWELCHKNLIKIATRQIDRNQTDSKAFGILGHVHQLTGEKRDAIECFEKALQIDCDNEEY
ISALLELRLSLQAQNDAPN
NT seq
1500 nt
NT seq
+upstream
nt +downstream
nt
atgcaaagtctgtcccagtgcagtaacacttggaaggattcctggaaaccaaaacttggc
cagcttcaatgtcacttcacatggaccccactaaaagaaaacatcgatttggatgatatg
aagcacagattagaagatttaatacaggctggtgtaaaatatcaagccatgtcttacaac
catctcgcttttatacactgcctgttaggaaattgtgaagaggcaattcagaatttaaag
gaagctgaaaggattctgagggagagacatggagatgaatttgagaaaaggatcttggtc
acctatggaaactatgtctgggtttattatcacatggaccgactggaggaggctcagtcc
tacctcgacaagctggaggcggtctgtaaactatttcctgaagcctctcggtttacagca
atgatacctgagctttacggggagaagggctggtcactgttgaggtcaagcaggaagtat
tatgaggaatcaaaggaatgttttaaaaaggctcttgaggaagatcctgataacacggaa
tggattgttggctatgccactgttctatctcgtctggaagtgttttctggtaccacagcg
catcatcagcccagagaatcagtgaagtggtttagacgtgtgttggagcttgaccctgat
gactcggtatccatggtgatgttggctctcaaacttcaggagttcaaacaaaaggaggaa
gcatgcgtgttagtggaacgagctttgcagaagtcccctgatcttctgtacgtgcttcga
tatgcagccaaatttctgaggaaagaaggagatttggaaaggtctttggagctgttgaaa
aaaggattgaaaattgctccagagtcggccttcttacatcaccaagcaggactgtgttac
aaaaccaaactaatgccactgatcaaaaatccacacctcaagaatcttcacaaacttagt
tcacaacaggtaaccaaattgatcaatcagtgcaagcatcacttcaaaaaggcaagtgag
aatcgccctttaacatttgttattgcaaagttggattatgcaataatatgctcattaaat
aaagaatatctcaaagtagaagagatcttcagcaacctactgaagtccgagcagatacac
cctgatgataaacaatcagtatatttacaggctggcttatttgaaatgcatcacaaaaga
tcagaatcaaatgccattgctcattttctggaaggacttaaattgaaacgtgactcattg
gaatgggaattatgtcacaaaaacttgatcaagattgcaaccagacaaattgataggaat
caaacagatagcaaggcctttggtatccttggacatgtacaccagctgactggggagaag
cgtgacgctattgaatgctttgaaaaggccttacaaattgattgtgacaatgaggaatat
ataagtgctcttttggaactccggctttcccttcaggctcaaaatgatgcaccaaactaa
DBGET
integrated database retrieval system
