Chiloscyllium plagiosum (whitespotted bambooshark): 122561191
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Entry
122561191 CDS
T08871
Symbol
lsm1
Name
(RefSeq) U6 snRNA-associated Sm-like protein LSm1
KO
K12620
U6 snRNA-associated Sm-like protein LSm1
Organism
cpla
Chiloscyllium plagiosum (whitespotted bambooshark)
Pathway
cpla03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cpla00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
122561191 (lsm1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cpla03019
]
122561191 (lsm1)
Messenger RNA biogenesis [BR:
cpla03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
122561191 (lsm1)
mRNA degradation factors
5'-3' decay
Lsm complex
122561191 (lsm1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LSM
Motif
Other DBs
NCBI-GeneID:
122561191
NCBI-ProteinID:
XP_043568658
LinkDB
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Position
22:complement(33808043..33830326)
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AA seq
133 aa
AA seq
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MNYMPGTASLIEDIDKKHLVVLRDGRTLIGYLRSVDQFANLVLHRTVERIHVGRKYGDIP
RGIFVVRGENVVLLGEIDLERETDTPLQRVSIEEILEAQRVQQHEKQEAEKAKSEALRER
GLSVPRTDTLDEY
NT seq
402 nt
NT seq
+upstream
nt +downstream
nt
atgaactacatgccaggaacagccagcctgatagaggacattgacaagaaacatttagta
gtacttcgagatgggagaacattaataggatatttaaggagtgtagatcaatttgctaat
ttggttcttcatcggacagtggaacgaatccacgtaggaagaaaatacggtgatattccc
agagggatttttgttgtccgaggagaaaatgtggtgcttctgggggaaatagatctggaa
agggagacggatactcccttacagagggtgtctattgaggagatcctggaagctcaaaga
gttcaacagcatgaaaaacaagaggcagaaaaggcaaaaagtgaagctttgagagaacga
ggattatctgtcccccgtacagatactcttgatgaatactaa
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integrated database retrieval system
