Chiloscyllium plagiosum (whitespotted bambooshark): 122561249
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Entry
122561249 CDS
T08871
Symbol
rrp12
Name
(RefSeq) RRP12-like protein
KO
K14794
ribosomal RNA-processing protein 12
Organism
cpla
Chiloscyllium plagiosum (whitespotted bambooshark)
Brite
KEGG Orthology (KO) [BR:
cpla00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
cpla03009
]
122561249 (rrp12)
Ribosome biogenesis [BR:
cpla03009
]
Eukaryotic type
90S particles
Other 90S particles
122561249 (rrp12)
Pre-60S particles
Other pre-60S particles
122561249 (rrp12)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRP12_HEAT
TOR1L1_N
CEP104-like_TOG
Motif
Other DBs
NCBI-GeneID:
122561249
NCBI-ProteinID:
XP_043568803
LinkDB
All DBs
Position
22:complement(42365692..42419160)
Genome browser
AA seq
1290 aa
AA seq
DB search
MSRSGRLRSGVKPKLKRWRKGQSSESNPETHRFRDAARSGFFSKPAGKSDLTVDVLKLHN
DLQSNSSLFDPRESSAEDPFSKCEEGAPSEETTGTFLSGLSDCSNLTFRRVQRLWESNSA
AHKEVCAVLAAVTEVIRSQGGNETETEYFAALMTTLEAVESEESIAAVVYLLNLVMRRVP
GPVLIKKFSDTAKVFMNLLSAQVNSGSTAGLRWILACLSTLLRRQDLTVWSFPSTLQVYH
GVLSFTVHVKPKVRKEAQRSICSILKGSDFMFGDLAPPHHPAAQSTARFCIKEIEESGGG
DQGTTTLHVLGLLKDVLPCFPVSCVKSCCETLLRVMTLSHVMVTACAMQAFHGLFVAKPN
STVLTGELNAQIITALYDYLPNIGDLQPVLAWLTVMEKAHISLCRLQGSLCLAHLPRLFC
TAVSCLLSSHTQLVVAAAETMKMLLRECVAPFANDIGVFTSSSPSGPASYICKMFRAVEN
GLTYRFHASWAFVLQVLSTFFEVIGKQAYPVMKQCVQTLCDLRETPYFAYTKELDRTVGM
AVECMGPESVLQAVPLQIDGTEETFDFPRSWLIPVIRDHVKHTRLTFFNQYFLPLAANLK
NRALELAQSGRPLEAKIYDTLQWQIWTMLPGFCTKPTDTAVAFKGIARTLGTVISDHPDL
RLTICQALRTLINKGCENETDRAEVSRFAKNFLPVLFNVYSTEPASGESAAYRLPVLDTI
KVYLTLTDQQLVCGFLDKASEKLKKAENSEFTRLSLMDLIVAMAPVVDELSMNNVFQTIL
PFLQSKDHHVQKKAYRILEEMCGGEREACRQFVHKHLEEMKETLLGSLKSAASPAKRPRL
KCLIHIVKQLSVEHQPFIVALLPEVIICMKEVSIGARRNGYTLLIEFGRAFLRFYEDSRE
AVGQYLALVYAGLTGSVTMISCTVLALTRLVFEFKDQMDVSTIEQLLQNICLLLQSKTRD
IIKSALSFIKVILFIMDTKVLAQQLQLLMESIGNLRDDMRRHFRVKLKNIFTKFIRKFGF
EMIDSMVPEEYHRVLVNIRKAEARNKRQRALKRAESGSESEDETPKQNGDSIEEILAESD
SDEEVIEKAEKVTKKQIIQKSSAWLKEGEADEPLNFLDQKVAQRVLATKPELKKKASIKH
DFPVLSDGRLVISQGAKDEQLKDSEDEANEILEEVGVKTKAAQKQKFKTADDDEEMQTDS
CYKAGGSGIHRQTLSKRNREYGAEYKSTKGRGDVKQRGKLDPFAYVPLNKSQLNRRKKAK
ICGQFKGLVRAARKGAEAGRRLQKKKQRLR
NT seq
3873 nt
NT seq
+upstream
nt +downstream
nt
atgtcgcggagcgggcggctacggtccggagtgaagccgaagctgaagcgctggcggaaa
gggcagagcagcgaatccaacccggagacccaccgcttccgggatgccgcgcggagcggc
ttcttcagcaaaccggccggtaagagtgatctgacagtggatgtgctgaaactgcataac
gaccttcaatccaacagttcattgtttgatccaagagagagttcagcagaagaccccttt
tccaagtgtgaggaaggtgcaccctcagaagaaaccactggcacctttctcagtggcctg
tctgattgcagcaacctgacctttcggcgagtgcagcgtttatgggaatccaactctgct
gcccacaaagaggtgtgtgctgttttggcagctgttacggaggtgattcgatctcaaggt
gggaatgagacagagacagaatattttgcagctttgatgaccacactggaagctgtagaa
tctgaggaatcaattgcagctgttgtctatctgctgaatttggtaatgagacgtgttcct
ggtcctgtcttgataaagaagttctcagacacagcaaaagtttttatgaatcttttatct
gctcaagtgaactcaggatctacggcaggtctgcgatggattcttgcctgcctctccaca
ctgttacgcaggcaggatttgactgtgtggagtttcccgtccactcttcaagtttaccat
ggtgtcctcagtttcactgtacatgtcaaaccaaaggtccggaaagaagcgcaacgcagc
atctgctctatactcaagggaagtgacttcatgtttggagacttggctccaccccatcat
ccagctgcacaatcgacagccagattctgcataaaggaaattgaggagtctggaggtggt
gatcagggtacaacaacactgcatgtgttgggtttgctgaaggatgtgctcccttgtttc
cctgtcagttgtgtaaagtcatgctgtgagactctgctcagagtcatgactctcagtcat
gtgatggtgacggcttgtgcgatgcaagcatttcatggactctttgttgccaaaccaaac
tcaacagtcctgacaggcgaactcaatgctcagatcataactgctttgtatgattacttg
ccaaatattggtgacctacagcctgtcctggcctggcttaccgtaatggaaaaagcacat
atcagcctgtgcaggttgcagggttccttgtgtttggctcatctccctcgtcttttctgc
acggctgttagttgtctcctttcatcacacacacagctcgtggttgctgcagctgaaacc
atgaagatgctgctgagagagtgtgtggctccttttgccaatgacattggtgtatttact
tcatcttccccatctggtcctgcctcctacatttgtaagatgtttagggcagtggagaat
gggctgacctatcgattccatgcttcctgggctttcgtactacaggtcctcagcacattc
tttgaggtcattggcaagcaggcctatccagtgatgaaacagtgtgtgcagactttgtgt
gatctgcgagagactccatatttcgcctacaccaaggagctggatcggactgtagggatg
gctgttgagtgcatggggccagaatctgttctacaggcagttcccctacagattgatggc
actgaggagacgttcgactttcctcggagttggctcattcctgtgatccgagaccatgta
aaacatacacggctcactttcttcaaccaatactttctacccttggctgcaaatctcaag
aacagagcacttgaactcgctcagtctggacgacctcttgaagctaaaatttatgacacg
ttgcaatggcagatttggacaatgctgccaggattctgcacaaaacccacagacacagca
gtggctttcaaaggtattgcgaggactttgggcacagtcatcagtgaccacccagacctc
cgactcaccatttgtcaggcgcttcgcacgctcatcaacaaaggttgtgaaaatgagact
gatcgagctgaagtgagtcgatttgccaagaatttcttgccagtcctgtttaatgtttat
agcacagaaccagcaagtggagagagtgcagcctacagactgcctgtgcttgacactatc
aaagtatacctgactctaactgaccagcagctggtgtgtggatttctggacaaggccagt
gagaagctgaagaaggcagagaattcagagttcacgcggctgtcacttatggacctgatt
gtggcaatggcacctgtggtcgatgagctcagcatgaataacgttttccagaccatcctc
ccattcttgcagagcaaagatcatcatgtccagaagaaggcctatcgaatccttgaggag
atgtgtggtggggagagggaagcatgcagacaatttgttcataaacatttggaggaaatg
aaagaaacattgctgggatctctgaagagtgcagcctctcctgcaaagaggccaaggtta
aaatgtctgattcatattgtcaaacagctgtcagtggaacatcagccattcattgttgcg
ttgcttcctgaggttataatctgcatgaaagaagtctccattggagctcgtagaaatggc
tacaccttattaattgagtttggacgggcctttttaaggttctatgaagactcgagagag
gctgttggccagtacctggcattggtatatgctggtttaactggatccgttacaatgatc
agctgcaccgttcttgcactcactcggctagtgtttgaattcaaagatcaaatggatgta
tctaccattgagcagctgcttcaaaacatctgtctcttgcttcagtccaaaacacgtgat
atcatcaaatcagccctgagttttatcaaagttattctgttcatcatggatacaaaggtt
ctggctcaacagctacagctgctgatggaaagtattggcaatttgcgggatgatatgaga
cggcatttccgtgtaaaattaaaaaatatcttcacaaaattcatacgcaagtttggattc
gagatgattgacagcatggttccagaggagtaccatcgagtgcttgtcaatattcgtaaa
gcagaggcccggaataagaggcaacgagctctgaaacgagctgagagtggctcagaaagt
gaagatgaaactccaaaacaaaatggggacagtattgaagagattctggccgagtctgat
tctgatgaagaggttattgagaaagcagagaaagtgacaaagaagcaaattatccagaag
agctctgcttggctgaaggaaggggaagctgatgaacctctcaattttctggaccagaaa
gtggcacagagggtgttagccactaaaccagagctgaagaagaaagcaagcattaaacac
gatttcccagtgttgtcagatggccgattggtaatcagtcaaggagcaaaggatgaacaa
ttaaaagactctgaagatgaagcaaatgaaatcttggaggaagttggtgtgaaaactaaa
gctgcacagaagcaaaaattcaaaactgctgatgatgatgaagagatgcagacagattca
tgctataaagctggaggttctggaattcacaggcagacactttcaaagagaaatagagag
tatggtgcagagtataaatcaacgaaaggacgaggggatgtgaaacagagagggaagctg
gatccttttgcctatgtcccacttaacaaatcacagctgaatcgaaggaaaaaggcgaag
atttgtggccagttcaagggcctggttagagctgcacggaaaggggcagaggctggtcgt
agattacaaaagaagaaacagagactgcgatga
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