Chiloscyllium plagiosum (whitespotted bambooshark): 122561260
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Entry
122561260 CDS
T08871
Symbol
cfap43
Name
(RefSeq) cilia- and flagella-associated protein 43 isoform X1
KO
K24223
cilia- and flagella-associated protein 43
Organism
cpla
Chiloscyllium plagiosum (whitespotted bambooshark)
Brite
KEGG Orthology (KO) [BR:
cpla00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
cpla03037
]
122561260 (cfap43)
Cilium and associated proteins [BR:
cpla03037
]
Motile cilia and associated proteins
Tether/Tether head (T/TH) complex
122561260 (cfap43)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_EML_2
WD40_WDHD1_1st
WD40_CDC20-Fz
ANAPC4_WD40
WD40_Prp19
WDR55
Beta-prop_EML
WD40
Beta-prop_Vps41
Beta-prop_HPS5
Beta-prop_LRRK2
Beta-prop_WDR90_POC16_2nd
CFAP43_N
Beta-prop_TEP1_2nd
WDR90_beta-prop_4th
Beta-prop_RIG_2nd
EIF3I
Beta-prop_RSE1_2nd
Motif
Other DBs
NCBI-GeneID:
122561260
NCBI-ProteinID:
XP_043568821
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All DBs
Position
22:complement(43326060..43446673)
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AA seq
1685 aa
AA seq
DB search
MDNADSLSVRWVKGYTPQKVLFVNNNTICYPCGNFLIFMDINTKKEKVLQCENGSIGVFT
TNSTKSIVAFAEQRLKPFINLYSFPELTKTSVLTDGAELDYMLLEFSYSGFYFASFSSLP
EFNLTIWNWKANVRLCSESIVGMQPTVLSFNPVNQLQLCLASEERLLLWNIERCDDFHLL
KRIDVKLPAEDGTPVVSEDVGIGPDSSALTYYGPKMLISAQAGLVGDLANTFVPRELKKT
LVQPISVCWTPISDLYVGCNTGQLLLVDAELHRAVVLATPFNEQLSTGSLKNMSSNLTMS
VYPELKPCAVKTLALNKKGLYTAGLDGILYCIKVTPHKVEIEECFSVGMPIRNIAFSVDF
ESLLVATETGSMHIYKPSEPDKVTTVLDIHSGDYVSAALLGTGKQYCVSARILGAVQVWS
VADGKLISTLVLPVKIKVMASCPSSNYVALGTETGHIYFINLAKVETPHLVYQIHLHNIS
IQCLEYDHGGQYLLAGCSDGHMFILNAKPSKQFKVLGYTEVKDEIMGCSLAFHMSKKMVN
CLILASQTGDDKSHGATWLTRFDLLGDLTASSTSVDHRGMMNDVAIRKQTCQAELPLTSV
ILNTDLHVYGYCTLTRTIYKYKISRGSSNDSFSLITQAKVEGHQLGPGFLYLSANQQYLV
SVARDGYIQLRDANNLQGTHLETPCHSYRLGGVKSVTLSLDCRTVLTTGVHDGTIVCNTE
RVDPAGSERNKVVLDYNRSMISMLDQSCVAEDKALAVLEQQREVTKDKLDVAENVSHLSR
GTSTLSASSFSIASTSSSKSYQRLDDSRFPESTWLETKMAEAVEKDNRKHAEAKAKLKQG
IRKLRATIKRMMLENENVPEIERLEHHEFNLDLKEQKRLHSEGEEKVAKVRETIEMENLA
SQYLREVIKRECWDNMSVKGRTLEAFSSGLAVTNYPMRERSSGELQLLKKVMQQRTIELI
DLKVRKDIVETPPKKEEKEDEEAEDEESKEEESTALKGSLTSEYGVVNPYLHKQLELHTK
DEKINQIILLQDVIYNIKTAFNKEFDATYKQKEVEMARVKDRTMRILEIMQQLDMDEEVW
LPTMSNKELPEREFEVQDSEITAERYLTPEQKRKLEEEYKAEQLRLLAAKADNWRERALK
DMMGGVLETKKSDILKMEIPVPYFMDKPEFEWTEEQIKQAKEYAIKEQELNEEKDKYRKT
LESELKKLQSSVAESRSNFDDIMNKLFEKKVRTEMIIYQEELKICNLVFSLRIEEEIQNR
NAQINYILEEQKDFMAVKSQMTQSMKVMVDRFRESYDDLVAEDRLLDRGFRKEFSDVSAT
MVDQLYKLYKRRPKVQLQRIQVATANPFEDQSQSVDDSHASFLAAMLDLDSLDFKPENLD
PAVWNRFCESRRKKIESENQVRFKAVTLAEMQMFLQRRMEEDENNGQQINNLIQELNNSL
REIKSQFQLNLMVQLVLKQGQVEVTSSDFIPDYSNSIFLHKGVVEDLNSTIQLLGEKKVA
SMVECKDFRKKIVQVEWECQKMLMQMDDLHNKIRDILKFKISKQAQMYLREANYDSQINA
NIMGMERSVQGQEKFHSKVLKKKQEAIKELEKQIAQLKREVKVMDRQLKEQHISVSERQN
IQEMITPVESEQDTRNRFRDLMQHNRLMELNRSQAEDIAILRSELERQRMKSFPILAETE
QYSYA
NT seq
5058 nt
NT seq
+upstream
nt +downstream
nt
atggacaatgcagactctctatctgtcaggtgggtgaaaggttacacaccacagaaggtg
ctttttgtgaacaataacacaatatgttacccttgtggaaactttctgatcttcatggac
ataaacacaaagaaggagaaggtgctgcaatgcgagaatgggagtattggagttttcacg
accaacagtaccaaaagtattgttgcctttgcagagcagcggttaaagccattcataaat
ctgtacagctttcctgagctgaccaagacttctgtcctcacggatggggcggagttggac
tacatgcttctggagttcagctactcgggcttctattttgccagcttctcctctctccca
gaattcaatctcaccatctggaactggaaggcaaacgttcgtctttgtagcgagtctatt
gtaggcatgcagcctactgttctgagttttaacccagtgaaccagctccaactgtgtctg
gccagtgaggagcgcctgttactgtggaatattgaacgatgtgatgactttcacctatta
aagcgcatagatgtaaagctccctgcagaagatggaactccagtagtttcagaggatgtt
gggattggtcctgacagcagtgctttaacttactatggcccaaagatgttaatatcagcc
caggcaggtcttgtgggagacttggcaaatacatttgtgccaagggaactaaagaaaact
ttggttcagcccatatctgtctgctggaccccaatctctgatttgtacgtgggctgtaac
acaggacaacttttactggtagatgctgagttacatagagctgttgtattggctactccg
tttaatgaacagttgtccacaggcagtttgaaaaatatgtcatccaatcttactatgagt
gtctatccagagctaaagccatgtgcagtgaaaaccctcgcgctcaacaaaaagggacta
tatacagcaggattggatggaattctctactgtatcaaggtgacaccccataaagtggag
attgaggaatgcttttcagtaggaatgccaattaggaatatcgcattctcagtagatttt
gaatcactgcttgttgctacagaaacgggttcaatgcatatttacaagccatcagagcca
gacaaggtgaccacagtcttagacatacacagtggggactacgtatcagcagctctgctg
gggacagggaaacaatactgtgtgtcagcaagaatattaggtgctgtgcaggtgtggtca
gttgcagatgggaaactcatcagtacgcttgtccttccagtaaagattaaagttatggcg
agctgtccttcctccaattatgttgctctgggcactgaaactggtcacatctatttcata
aatctggcaaaggtggagacccctcacctggtttaccaaatccatctccacaatatatca
atacaatgtctagaatatgaccacgggggtcagtaccttttggctggatgctctgatgga
catatgttcattttgaatgctaaaccctccaagcagtttaaagtcctcggatatacagag
gtaaaagatgaaattatgggatgttctcttgcatttcacatgtcaaagaaaatggtgaat
tgcctgatattggcaagccagactggagatgacaaatcacatggagccacttggctgact
agatttgatcttcttggagatctcacagcatcttctacatctgttgatcaccgtggaatg
atgaatgatgttgctattcggaaacaaacttgtcaagccgagttgcctttgacctctgta
atcctgaacaccgaccttcacgtctatgggtactgcactttgacaaggaccatctataaa
tacaagatctctaggggttcgtcaaatgattcatttagcctgatcactcaggctaaagtt
gaaggtcaccagctaggaccaggattcctctatctctctgcaaatcaacagtacttggta
tctgtggccagggatggatacattcagttaagagatgccaacaacctgcagggaacgcac
cttgagactccatgtcactcatatcggctaggaggagtcaaatcagtcaccttgtcattg
gactgtcgaactgttcttaccactggtgtccacgatggtaccatagtgtgtaacacagaa
agggttgacccagcagggtcagaacggaataaagtagtgctggattacaatcgctcaatg
atttcaatgctggatcagagctgtgtggctgaggacaaagccctggcagtgttggagcag
caaagagaggtcacaaaggacaagttggatgttgcagagaatgtttcccatctctcacgt
ggaacttcgacactctctgccagctcctttagcatcgcaagtaccagcagctccaagagc
taccaacggttggatgacagcagattcccagaatcaacctggctggaaacaaagatggca
gaggcagtagagaaggacaatcgcaagcatgcagaagccaaagctaagctgaaacaagga
atcagaaagcttcgtgcaacaataaagcggatgatgcttgaaaatgagaatgtgcctgag
attgagcgattagagcaccacgagtttaaccttgatctgaaggaacagaagaggctgcac
tcagagggagaggaaaaagtggccaaggttcgtgagacgattgagatggaaaacctagcc
agccaatacctacgtgaagtgattaagagagaatgctgggacaacatgtctgtgaaaggg
cgaactctggaggctttttcttcaggattggcagtgactaattacccaatgagggagcgc
agcagtggtgagctgcagcttcttaagaaggtcatgcagcagagaacaattgaattgatt
gacctgaaggttcgaaaagatattgttgagacaccacctaagaaagaagagaaggaggat
gaggaggctgaggatgaagagtcaaaagaggaagagagtacagcattgaaaggcagcctg
accagcgaatacggtgtggtaaatccttacttgcacaaacagttagagctgcatacaaag
gatgagaagattaatcagatcatcctgttacaggacgtaatttacaacataaaaactgct
ttcaacaaggaatttgatgcaacctacaaacaaaaagaggtggagatggctcgagtgaaa
gaccgaaccatgcggatcttggaaatcatgcagcaactagacatggatgaggaggtctgg
ctgcccacaatgagcaacaaggagttacctgagcgagagtttgaagtccaggattctgag
attacagcagagcgctacctcaccccagagcaaaaacgtaaactggaggaagagtataag
gctgaacagctgcggctactagctgctaaggctgacaactggagggagcgtgcactgaaa
gacatgatgggaggtgtcctggaaaccaagaaatcagacattctgaaaatggaaattcct
gtaccgtatttcatggacaaacctgaatttgaatggactgaggagcagatcaaacaagct
aaagaatatgccatcaaagagcaggaattaaatgaggagaaggacaaatatcggaagaca
ctggagtccgagctgaagaaattgcagagttcagttgctgaaagcagaagcaattttgat
gacattatgaacaaactgtttgaaaaaaaagtgagaactgaaatgatcatctaccaggag
gaactgaagatttgcaatctggtcttctcattgaggatagaggaagaaatacaaaacagg
aatgctcaaatcaattacatacttgaggagcagaaggatttcatggcagtaaagtctcag
atgacacagagcatgaaagtgatggtggaccgattccgagaaagctacgatgatctggtg
gctgaggacagactcctagatcgtggattcaggaaggagttctctgatgtctctgctaca
atggttgaccaactttataaattatacaaacgcagacccaaggtacaattgcaaaggatc
caagtggcaacagccaacccttttgaggaccaatcgcagtcagtcgatgacagtcatgcc
agtttcctggctgccatgttggatttagattcacttgatttcaaacccgagaacctggac
ccagctgtgtggaatcggttctgtgaaagtaggagaaaaaaaatagagagtgaaaatcag
gtgaggttcaaggctgtgactctggcagagatgcagatgtttcttcaaaggaggatggag
gaggatgaaaataatgggcaacaaatcaacaatttgatccaggaactcaacaacagtctc
cgtgaaatcaagtcacaatttcagctgaatctgatggtgcaacttgtgttgaaacaaggc
caagtggaggtgacgagcagtgacttcattcctgactattccaattccattttcctacat
aaaggcgtcgtggaggatctgaacagcaccattcagttattaggagaaaagaaggtggcc
agtatggtggaatgcaaagacttcaggaagaaaattgttcaggtggagtgggaatgccag
aagatgttgatgcaaatggatgacttgcacaacaagatccgagacatcctgaaatttaag
atcagcaaacaagcacagatgtatctaagggaggcgaattatgattctcaaatcaatgca
aacattatgggaatggaacgctcagttcaaggtcaggagaagttccatagcaaggttctc
aaaaagaaacaggaggccattaaagagctggagaagcagattgcacagctgaaacgggag
gtgaaagtgatggatcggcagttgaaagaacaacatatttctgtcagcgagaggcaaaat
atccaggagatgatcacgccagttgaatccgaacaagatactcgcaatcgtttcagggac
ttaatgcagcacaaccgtctgatggaactgaatcgatcccaggccgaagatattgctatt
ctgagaagtgagttggaaagacaacgtatgaagagctttccgatcctggctgaaacagag
caatactcctacgcttaa
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