Chiloscyllium plagiosum (whitespotted bambooshark): 122561302
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Entry
122561302 CDS
T08871
Symbol
mms19
Name
(RefSeq) MMS19 nucleotide excision repair protein homolog isoform X1
KO
K15075
DNA repair/transcription protein MET18/MMS19
Organism
cpla
Chiloscyllium plagiosum (whitespotted bambooshark)
Brite
KEGG Orthology (KO) [BR:
cpla00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
cpla03036
]
122561302 (mms19)
03400 DNA repair and recombination proteins [BR:
cpla03400
]
122561302 (mms19)
Chromosome and associated proteins [BR:
cpla03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
122561302 (mms19)
DNA repair and recombination proteins [BR:
cpla03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
Other NER factors
122561302 (mms19)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MMS19_C
MMS19_N
TOR1L1_N
Vac14_Fab1_bd
HEAT_ECM29
HEAT_2
Ric8
HEAT
SYMPK_PTA1_N
Motif
Other DBs
NCBI-GeneID:
122561302
NCBI-ProteinID:
XP_043568913
LinkDB
All DBs
Position
22:complement(46929277..46995921)
Genome browser
AA seq
1032 aa
AA seq
DB search
MAADMRLLGLVEEFVSGLQDGAAKDLATGVIDGKCTALEIVEALGKCLTNSEPRIRSRGI
QLLSQVLLLSYSSLKQREVEALAIFYIDRLKDHYIITPYVLQGLKALSMSSVLPEGLAVT
MLKALFQEVHVQSLMQSDRHSVYTIISNLMDTREQELKSLAADFTFGFIQAMDGEKDPRN
LLMAFQISRDIIINNYELGNFVEEFFEITSCYFPIDFTPPPNDPHGISQEELVLSLRSVL
TATPRFAEFLMPLLIEKLDSDIQSAKVDSLRTLTTCCRDYRKKELKEFLPALWHSIRREV
FQTASEKVEAEGLAALQALSTSLSKSVIDSDAEDSLDAFLNNVLQDCKHHLCEPDMKLVW
PSAKLLQAAASASYRACSKINSCIFPLLLEQFNKHKQSSQRWTILGILKIFIKLIQKWDR
DEEDENPLCAFKDQLCILVFSALTDSSVQLQMVGTSTLAVLASQQDLLSSSDIELSVDHL
NRLILQEADPQVCAAALEASTIISAIQPSAFVTKMVPALTQDLNTERMEVKDDGEPLAPS
GNALHQRSIQALAAISTHPSIVKRTVPVLLQHLTNLQKGTSGNESDMAILMCQSLQRVAE
HCRGAEESSQYFHQMVVPCLLGLAIQTAMQDCASEVRLGILCEEQVITAFGTVISTAYSD
GETERASRTISQIVALYLDGDVSSLPENNLSRKFQPFQSPDSPWPQTQLIALLQAAVCSL
PKNIIVPQQERLLERLMELACTSDHRFTYTSAAKCIAGLINKYPAGEQLDSVLQDVLKKI
DSGLERNAGVCAQATSRTRVFTLLLWLTKSLVLRYHSLAATLTDKLIQLLTDPDLGTEAA
DGFSVLVSDSSDVLNKATHADIRIMYRQRFFTENVPKLVQGFHSASEDNKSNYLKALSHV
LNSLPKQVLMTELPSLLTLLLEALSCSDQVVQLSTLGCLHPLLLDATQTMSLHVDTLVNK
LLNLTSSPAMKVRIASLQCMHALTKLPPHVILPHKSRVIQALAKPLDDKKRLVRKEAVRA
RGEWFLLGSPGS
NT seq
3099 nt
NT seq
+upstream
nt +downstream
nt
atggcggccgacatgaggctgctcgggttggtggaggagtttgtgagtggattgcaggac
ggggcggccaaggacttagccacaggtgtcattgatgggaagtgcactgcactggaaatt
gtggaagctttggggaaatgtttgacgaattctgagccaagaataagaagccgggggatt
cagctcctctctcaggttttgctgctgtcttattcgtctctcaaacaaagagaagtggag
gcactggctatcttctatatagatcgactgaaggatcattacattatcacaccttatgtc
ttgcaagggttgaaagccttgagtatgagctctgttctgccagaagggttggctgtaaca
atgttgaaggcactgttccaggaggtacatgtccagtccctgatgcaatctgatcggcat
tctgtgtacaccatcatctcaaatttaatggataccagagagcaagaactgaagagtttg
gcagcagacttcacatttggttttattcaagcaatggatggagagaaggacccacggaat
ttattaatggcttttcaaatctccagggacatcatcatcaacaattatgaacttgggaac
tttgtggaagagttctttgagatcacttcatgctattttcccattgattttacaccgcct
ccaaatgacccacatgggatatctcaagaggagttagtgttgagcctgcgatctgtactt
actgccacaccccggtttgcagagttcctaatgccactcctgattgagaaactggattcg
gatattcagagtgccaaagtggattcccttcggactctgacaacatgctgcagagattat
aggaagaaggagttgaaagaattcctaccagctctttggcactctatacgcagagaggtc
tttcagacagcaagtgaaaaggttgaagctgaaggtcttgctgctctccaggcactatca
actagtctgtccaagtcagttatcgattcggatgcagaggatagtctggatgcattcctc
aataatgttctacaggattgcaagcatcatctgtgtgaaccagacatgaaactcgtgtgg
ccaagtgcaaagctgctccaggcagctgcgagtgcttcgtacagagcatgctccaagatc
aacagctgcatatttcctctgttgctggaacaattcaataaacataaacagagtagccaa
cgttggacaatcttgggaattttgaaaattttcattaaactaatccaaaagtgggaccga
gatgaggaagatgagaatcccctgtgtgcctttaaggatcagctttgtatcctggtattc
tctgcactgactgattccagtgtccaactgcaaatggtggggactagcactttggcagtt
ctggcatcacagcaagatttgctgtcttcctccgacatcgagttgagtgtagaccacttg
aacagactgatcctacaggaggctgatcctcaagtttgtgccgcagcattggaagcttcc
acgatcatttctgcaatccagccctctgctttcgtcactaagatggttccagcactgacg
caagatttaaatacagaacggatggaagtgaaggatgatggcgaacctcttgcaccgtct
ggtaatgctctgcatcaacgcagtatacaggctctggctgccatttccacacaccccagt
atagtgaagaggacagtcccagtcctgctgcagcatttgaccaatttacagaaagggact
tcaggcaatgaaagcgacatggccatcttgatgtgccagagcctgcagcgagtggcagaa
cactgtcggggtgctgaagagagcagccagtactttcaccaaatggttgttccatgccta
ctgggactggccatccagacagctatgcaagactgtgcatctgaggtccggcttggcatc
ctgtgtgaggaacaggtaatcacggcgtttgggaccgtgatcagcactgcctacagtgat
ggcgagacagaacgagcttctagaacaatctcccagattgtggccttgtaccttgatggg
gatgtctcctccttgcctgaaaataacctttccagaaagttccagccttttcagtcaccg
gattctccgtggccacaaactcagctgattgcccttctgcaggctgctgtctgctccctg
ccaaagaatataatagtaccacaacaggagaggttgttggaacgactaatggagctagct
tgcaccagcgaccatcgattcacttacacgtctgctgctaaatgcattgctggcctcatc
aacaaataccctgcaggtgaacagttggactctgttctccaggatgtgttgaaaaagatt
gacagtgggctggagaggaatgctggagtttgtgcacaggctactagcaggacccgagtt
ttcaccttactgctgtggttaacaaaatcacttgtgctgcgctatcactctcttgctgcc
acattgactgacaagctgatacagctgctcactgaccccgatctgggaactgaggcagcg
gacggattctccgtcttggtcagtgactcctcggatgtcctgaacaaggccactcacgcc
gacattcgcatcatgtaccggcagcgattcttcaccgagaacgtccccaaactggtccag
ggcttccactcagccagtgaagataataagtcgaactacctgaaggcactttctcacgtg
ttgaacagtcttccgaagcaggtcctgatgacagagctcccgtcgctgctgactctgttg
ttggaggctttgtcgtgctcagaccaggtggtccagttgtccacactgggctgtttgcat
cctcttttgctggacgccactcagaccatgagcttgcatgtagatactttagtgaacaaa
ttgctcaatctgacttccagccctgccatgaaagtccgtattgcatccttacagtgcatg
catgcactgactaagctgccaccacatgtgatcctgccccacaaatcccgggtaatccaa
gccctggctaaacccttagatgacaagaagcgactggtgaggaaggaagcagtcagagct
cggggagaatggtttcttttagggagcccaggcagttga
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