Chiloscyllium plagiosum (whitespotted bambooshark): 122561357
Help
Entry
122561357 CDS
T08871
Symbol
shoc2
Name
(RefSeq) leucine-rich repeat protein SHOC-2
KO
K19613
leucine-rich repeat protein SHOC2
Organism
cpla
Chiloscyllium plagiosum (whitespotted bambooshark)
Pathway
cpla04519
Cadherin signaling
Brite
KEGG Orthology (KO) [BR:
cpla00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04519 Cadherin signaling
122561357 (shoc2)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LRR_8
LRR_14
LRR_4
LRR_LRWD1
LRR_9
LRR_NLRC4
LRR_5
Motif
Other DBs
NCBI-GeneID:
122561357
NCBI-ProteinID:
XP_043569024
LinkDB
All DBs
Position
22:complement(56678752..56820201)
Genome browser
AA seq
581 aa
AA seq
DB search
MSGTLGKEKECKEKDPKVSLGKDRERDPKASGGFGKDSKEKESKTKGKDAKEGKKESSGV
QPGVQFQVDNTIKRPNPAPGRKKSSNAEVVKELNKCREENAMRLDLAKRSIHILPTSIKE
LTQLTELYLYSNKLQCLPVELGSLVNLVTLALSENSLTSLPDSLDNLKKLRMLDLRHNKL
REIPTVVYKLISLTTLYLRFNRITTVEKDIKNLSKLTMLSIRENKIKQLPAEIGELCNLI
TLDVAHNQLEHLPKEIGNCTQITNLDLQHNELLDLPESIGNLSSLSRLGLRYNRLSAVPK
SLAKCSELDELNLENNNISSLPEGLLSSLANLTSLTLARNCFQSYPVGGPSQFSTIYSLN
MEHNRINKIPFGIFSRAKVLSKLNMKDNQLTSLPLDFGTWTSMVELNLATNQLTKIPEDV
SGLASLEVLILSNNLLRKLPHGIGHLRKLRELDLEENKLESLPNEIAYLKDLQKLVLTNN
QLTTLPRGIGHLTSLTHLGLGENLLTHLPEEIGTLENLEELYLNDNPNLHSLPFELALCS
KLSIMSIENCPLSHLPPQIVAGGPSFIIQFLKMQGPYRAMV
NT seq
1746 nt
NT seq
+upstream
nt +downstream
nt
atgagcggtacactaggaaaagaaaaagaatgcaaagaaaaggaccctaaagtttcattg
ggaaaagacagagaaagagatccaaaagcttctggtggctttgggaaagatagtaaagag
aaagaatccaagaccaaagggaaagatgccaaagagggaaaaaaagaatccagtggagta
caaccaggtgtgcaattccaagtggacaatacaataaaacggccaaatccagcaccaggg
cggaaaaaatcaagcaatgctgaagtggttaaagagttaaacaagtgtcgtgaagagaat
gcaatgcgtttggacttggcgaaaagatctattcacattcttccaacgtcaatcaaggaa
ttgacccaattaactgagctttatttgtacagtaacaaattgcagtgtttgcctgtagaa
cttggtagccttgtgaacttggtcactctggcactaagtgaaaattcacttacaagtttg
cctgactctctcgataacttgaagaaattgcgaatgcttgatctacggcataacaaactt
cgagaaatccctacagtagtatacaaactgatttccctcactactctgtatctgcggttt
aaccgtataactactgtggagaaggatatcaaaaatctatccaaacttacaatgctgagt
atccgtgagaacaaaattaaacagctccctgctgaaataggtgaactctgcaacctcata
acactggacgtggctcacaatcagcttgagcaccttccaaaagaaattggcaattgcacg
caaatcacgaaccttgacctacaacataatgagcttcttgatctgcctgaaagtatagga
aatctgtccagtctgagtcgcttgggcctgagatacaacagactgtcagctgttcccaaa
tcattggcaaaatgtagtgaactggatgaacttaatttagagaacaataatatctcctcg
ttacctgagggccttctgtcaagtctcgcaaatttgaccagtttaacattagcaaggaat
tgcttccagtcgtatccagttggcggaccctcacagttttcaactatctactctctcaac
atggaacacaaccgtatcaataaaataccttttggaatattctctagagctaaagtgttg
agtaagctgaacatgaaggacaatcagctaacttcacttccattggactttggaacctgg
acaagcatggtagaactaaaccttgccaccaaccaactcacaaagattccagaggatgtg
tcaggactggcttccctagaggttcttatcttatcaaataatcttcttcgaaaactgcct
catggcattgggcatttaagaaagctacgagagttagacttggaagaaaataagcttgaa
tctcttccaaatgaaattgcttaccttaaggatctgcagaaactggtcttgaccaacaat
cagttgacaacccttcctagaggaattggtcatctaaccagcctgactcatcttggcctg
ggagagaacttacttactcacttacctgaagaaattggtacactggaaaatctggaggag
ttgtatttaaatgataatccaaacctacacagccttccctttgagctggcactctgcagc
aaattgtccatcatgagcattgagaactgcccactcagccatctcccaccacagattgta
gctgggggtccgtccttcatcatccagtttctgaagatgcagggcccttatcgggccatg
gtctga
DBGET
integrated database retrieval system
