Chiloscyllium plagiosum (whitespotted bambooshark): 122561375
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Entry
122561375 CDS
T08871
Name
(RefSeq) interferon-induced protein with tetratricopeptide repeats 5-like
KO
K24850
interferon-induced protein with tetratricopeptide repeats 5
Organism
cpla
Chiloscyllium plagiosum (whitespotted bambooshark)
Brite
KEGG Orthology (KO) [BR:
cpla00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
cpla03016
]
122561375
Transfer RNA biogenesis [BR:
cpla03016
]
Eukaryotic type
tRNA degradation factors
Other tRNA degradation factors
122561375
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TPR_2
TPR_19
TPR_8
TPR_12
TPR_11
TPR_1
TPR_CcmH_CycH
RMD1-3
TPR_7
TPR_15
ARM_TT21_4th
CFAP70_TPR_C
CFAP70_mid_TPR
TPR_Psidin_N
Motif
Other DBs
NCBI-GeneID:
122561375
NCBI-ProteinID:
XP_043569073
LinkDB
All DBs
Position
22
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AA seq
535 aa
AA seq
DB search
MSGSQDWMHWYTNAETANEDTNYCQQYPTFMGMAGYTDQTVCETLQNSTAQHKLHSDTAR
DSLKEKLLQLQCHFTWTLQVEDVEWDDLQERIHYTIEADIVQYKVMPYNLLTFVNCVRGK
HEEAFDNLWEAEEILRKDHKSNVEKWSIITYGNAAWVYYHVGEVAEAQAYLNKLERICQQ
FPDASRFTAMTPEVYGEKGWSLLRFGWKYYEEANECIEKALEADPDNIEWNTAHATSLFR
LKENIGDPQCPEHCKVVKQLQRALELNPKDSLLKVTLALRLQYFKQEEESHRLLEDVLLN
SPDDPYLIQYAAKALREEGSVEQSLEMLKKALMLRPNSGLLHHQIGLCYKKKLFTLKKTP
YKYNAYEERKKLIELCKYHFQTAYDHKPSLVTAILDLAELFAECKDYSKADEIYENQLRN
KDCNRINRQLIHWKYGLHQLKRNGFLQRAIYHFKECLNLKVKSKMDIHCRAKLKEIAEER
LNEYSRDSVAFGILGLLHQLDGKKSKAIEFFQRALECDCDNEEFQSALSELKESA
NT seq
1608 nt
NT seq
+upstream
nt +downstream
nt
atgtctggtagccaggattggatgcattggtacactaatgccgagactgccaatgaggac
acaaattactgtcagcagtacccaaccttcatgggaatggctgggtatactgaccaaact
gtctgtgagaccttacaaaacagcacagcacagcacaagcttcacagtgacaccgcaagg
gattccctgaaagagaaactgcttcagctacaatgtcacttcacgtggaccctgcaagta
gaggatgtggagtgggatgatttgcaggaacgaatacattacacaattgaggctgacatt
gtgcaatataaagtcatgccttacaatctacttacttttgtcaactgcgtacgaggtaaa
catgaggaggcattcgataatttgtgggaagctgaggagattctgaggaaggatcacaag
tcgaatgttgaaaagtggagcatcatcacctacggaaacgcagcctgggtctattaccac
gtgggagaagtggcagaggctcaggcctacctcaacaagctggagaggatctgccaacag
ttccctgatgcctctcgctttacagcaatgacccctgaagtatacggggagaagggttgg
tccctgttgagatttggctggaaatattatgaagaggcaaatgagtgtattgagaaggct
ctggaagcagatcctgataacattgagtggaatacagctcacgcaacctctctgttccga
cttaaagaaaatattggagaccctcagtgtcctgagcactgcaaagtagtgaagcagtta
caacgggcattggaactgaacccaaaggactctcttctcaaggtcacgctggctctaaga
ctacaatatttcaaacaggaagaggaatctcacagattgttagaagatgtgctcctgaat
tctcctgatgatccctatttaattcaatatgcggccaaagctttaagagaggaaggatct
gttgaacaatccttagagatgttgaaaaaggcactgatgttaagaccaaactctgggctc
cttcaccaccagatcggtttatgctacaaaaagaaactgtttacactgaagaaaacacct
tataaatataatgcttatgaggaaaggaaaaaactgattgaactttgcaaatatcatttc
caaacagcctatgatcataaaccctcacttgtaactgcaatccttgatctggcagaactc
tttgcagaatgcaaagattattccaaagctgatgagatctacgaaaaccagctcagaaat
aaagattgcaaccgtataaacagacagttaattcattggaaatatggattgcaccagtta
aaaaggaacggattcttacagagagccatttatcacttcaaggaatgcctgaatctcaag
gtgaagagcaaaatggatattcactgtcgagcaaaactgaaagaaattgctgaagaacga
ttgaatgaatattcaagagacagtgtcgcctttggtatattgggactattacatcaactg
gatggcaagaaatccaaagccattgaattctttcagcgagccctggagtgcgattgtgac
aatgaagaatttcaaagtgctctcagtgaactaaaggagtctgcatag
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