Chiloscyllium plagiosum (whitespotted bambooshark): 122561389
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Entry
122561389 CDS
T08871
Name
(RefSeq) putative pre-mRNA-splicing factor ATP-dependent RNA helicase DHX32
KO
K18994
pre-mRNA-splicing factor ATP-dependent RNA helicase DHX32 [EC:
5.6.2.6
]
Organism
cpla
Chiloscyllium plagiosum (whitespotted bambooshark)
Brite
KEGG Orthology (KO) [BR:
cpla00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cpla03041
]
122561389
Enzymes [BR:
cpla01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
122561389
Spliceosome [BR:
cpla03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
122561389
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OB_NTP_bind
HA2_C
WHD_HA2
AAA_22
Motif
Other DBs
NCBI-GeneID:
122561389
NCBI-ProteinID:
XP_043569089
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Position
22:27320979..27362806
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AA seq
758 aa
AA seq
DB search
MAAVQVHTTKPDSASPCDRETFSEEFGSDSGDEVLLCDADLELNPFDGLPYSSRYYKLHQ
ERKQLPVWGAKSALMASFVSNSFIILCGNARIGKSSQIPQWCAEHCLSSKYQHGVVVCTQ
THKQTAVSLALRVADEMDVNIGHEVGYTIPFENCCINETILRYSTDDMLLQEMMSDPLLE
HYGVIVIDETHKRTVSTDVLLGLLKDIVRQRPELKVVIISSPHMSKKLHSFYGNVPLIQV
ENEEPIGYPVEVVYSCIPPENYFMPALKLLFEIHHTREKGDIAIFLSCIKEIDEACNIIR
RESSKLHPMLGELVPVPFYPEQSRYVDGPSDILEKNSRQYKRRVLLTTSMGESLICIENV
KFVIDVGMEKKNVYNPRIRADSLVTQPISKIQADMRTQIRGLAGLGKCFRLYTEEFLKKE
MTELSPACVLESKLTRMVLFLKRMAIADMGQCDFIDKPAPEALMQALEDLDYLAALDDDG
NLSEIGIIMSEFPLDPQMAKALVASCEFDCVHEMLTIAAMVTAPFCFLDPPPGSEEIACT
CRRKFLHSEGDHFTLINVYNAYKQNKLLSSNQFCEDEKWCHDNFLNCSALRTADAIRADL
LEIMQRIELPISKPAFGTHKNSLNVKRALLSGYFMQTARDVDGLGNYVMLTHKHVAQLHP
FSSYCSTKLKPEWVLFHEFTISENNCIRIVSDVSPEMFVQLAPQYYFTNLPPSESKELLQ
EIIDHFSKLSDGEEQHVSNKENKQEDLSHQHEDRCVIQ
NT seq
2277 nt
NT seq
+upstream
nt +downstream
nt
atggctgctgttcaagtgcatacgacaaagccggacagtgcatcgccttgtgacagagaa
actttctccgaagagtttggatccgacagtggcgacgaagttttactctgcgatgcagac
ttggagctgaacccctttgatgggctgccttactcctctcgctattacaaactccaccaa
gaacgaaagcagttaccggtgtggggagcaaagagcgccttaatggcgagttttgtgagt
aattcctttatcatcctatgtggaaacgccaggatcgggaaaagcagtcagatcccacag
tggtgtgcagaacactgtctttcttccaagtatcagcatggtgttgtggtgtgtacacag
actcataagcagacggctgtcagccttgcacttcgcgtggcagatgaaatggatgtcaac
atagggcatgaagtgggctacacaattccatttgaaaactgctgcatcaatgaaactatc
ctgagatacagcacagatgatatgctactgcaggaaatgatgtcagatcctctattggag
cactatggtgttatcgttattgatgaaactcacaaaagaacagtttccacagatgtacta
ctaggccttctaaaagacattgtgagacaaaggccggaactaaaagttgtaataataagc
tctcctcatatgtccaagaagctgcattccttttatggcaatgttcctctcatacaagtg
gaaaatgaagaacccattggatatcccgttgaggttgtttacagttgcatacctccagaa
aactatttcatgcctgcacttaagctgctgtttgagatacatcatacaagggaaaagggc
gatattgcaatttttctatcctgtataaaggaaattgatgaggcctgcaacataatcaga
cgagaaagttctaaactgcacccaatgttaggagaacttgtgccagttcctttttaccca
gagcagagtaggtatgttgatggaccaagtgacatattggagaagaactccaggcagtac
aaaaggagagtgctactgaccacaagtatgggagaatccttaatttgcatagagaatgtc
aagtttgtcatcgatgtgggcatggaaaaaaagaatgtttacaatccaagaatacgagca
gattccttagtgacacaacccatcagcaaaatccaggctgacatgcgtacacagatcagg
ggcttagctggattgggtaaatgtttccgattatacactgaagaatttctgaagaaagag
atgacagagctttcaccagcttgtgtactagaatccaagcttactcgcatggttttattc
ctgaaaagaatggctatagcagacatgggccagtgtgactttattgataagccagcccct
gaagccctaatgcaggcattagaagaccttgattaccttgcagccctggatgatgatgga
aatctgtcagaaattggaatcattatgtcagagttcccactggatccccaaatggcaaaa
gctcttgttgcatcctgtgaatttgattgtgtgcatgaaatgttaacaatagctgccatg
gtaacagctcccttttgtttcttggatccacctcctggttcagaggaaattgcatgcact
tgtcggaggaaatttttgcattcagagggtgatcactttacccttataaatgtttacaat
gcatacaagcagaacaagctgttatcatcaaaccaattctgtgaagatgaaaagtggtgc
catgacaatttcttgaattgctctgctctgaggacagcagatgccatccgagctgaccta
ctggaaattatgcagcgcattgaattacccatttcaaaacctgcttttggtacacacaag
aattcactgaatgtgaaaagagctttgttatctggttatttcatgcagacagctcgagac
gttgatggattaggaaactatgtcatgctaacgcacaaacatgtagcacagctgcaccct
ttctcaagctactgttccacaaaattaaaaccagaatgggttttgttccatgaatttaca
atatctgagaacaactgcatcaggatcgtttcagatgtatcacctgaaatgtttgtacag
ctggctcctcagtattacttcaccaacctaccccctagtgagagcaaggaactcctacag
gaaatcattgatcacttctcaaaactgtcagatggagaggaacagcatgtatccaacaaa
gaaaacaagcaagaagatcttagccaccagcatgaagacagatgtgtgattcaatga
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